RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 TRGV4A0A0C4DH28 118 aa4.85□□□□□ -1.63
CLCN3-206ENST00000507875 PSPHP1O15172 72 aa4.85□□□□□ -1.63
CLCN3-206ENST00000507875 PSMB2P49721 201 aa4.85□□□□□ -1.63
CLCN3-206ENST00000507875 CEND1Q8N111 149 aa4.85□□□□□ -1.63
CLCN3-206ENST00000507875 SERP1Q9Y6X1 66 aa4.85□□□□□ -1.63
CLCN3-206ENST00000507875 TRBV7-3A0A075B6L6 115 aa4.84□□□□□ -1.63
CLCN3-206ENST00000507875 H7C423 109 aa4.84□□□□□ -1.63
CLCN3-206ENST00000507875 FXYD2P54710 66 aa4.84□□□□□ -1.63
CLCN3-206ENST00000507875 NPC2P61916 151 aa4.84□□□□□ -1.63
CLCN3-206ENST00000507875 PRO0461Q9UI25 63 aa4.84□□□□□ -1.63
CLCN3-206ENST00000507875 PRO0255Q9UI72 69 aa4.84□□□□□ -1.63
CLCN3-206ENST00000507875 SMIM13P0DJ93 91 aa4.84□□□□□ -1.64
CLCN3-206ENST00000507875 HERVK_113P61574 105 aa4.84□□□□□ -1.64
CLCN3-206ENST00000507875 OPRPNQ99935 248 aaPredicted RBP4.84□□□□□ -1.64
CLCN3-206ENST00000507875 LINC00588Q9Y4M8 146 aa4.84□□□□□ -1.64
CLCN3-206ENST00000507875 A0A1B0GUV1 79 aa4.83□□□□□ -1.64
CLCN3-206ENST00000507875 RAB37Q96AX2 223 aa4.83□□□□□ -1.64
CLCN3-206ENST00000507875 ZNF815PA8K554 130 aa4.83□□□□□ -1.64
CLCN3-206ENST00000507875 UBE2D3P61077 147 aa4.83□□□□□ -1.64
CLCN3-206ENST00000507875 UBE2D2P62837 147 aa4.83□□□□□ -1.64
CLCN3-206ENST00000507875 S100A7L2Q5SY68 101 aa4.83□□□□□ -1.64
CLCN3-206ENST00000507875 TMEM170BQ5T4T1 132 aa4.83□□□□□ -1.64
CLCN3-206ENST00000507875 HIST1H4GQ99525 98 aa4.83□□□□□ -1.64
CLCN3-206ENST00000507875 TIMM21Q9BVV7 248 aa4.83□□□□□ -1.64
CLCN3-206ENST00000507875 SND1-IT1Q9HBX3 110 aa4.83□□□□□ -1.64
CLCN3-206ENST00000507875 CXCL6P80162 114 aa4.82□□□□□ -1.64
CLCN3-206ENST00000507875 SLC25A29Q8N8R3 303 aa4.82□□□□□ -1.64
CLCN3-206ENST00000507875 TIMM17BO60830 172 aa4.82□□□□□ -1.64
CLCN3-206ENST00000507875 SBSPONQ8IVN8 264 aa4.82□□□□□ -1.64
CLCN3-206ENST00000507875 PPDPFLQ8WWR9 84 aa4.82□□□□□ -1.64
CLCN3-206ENST00000507875 CHCHD7Q9BUK0 85 aa4.82□□□□□ -1.64
CLCN3-206ENST00000507875 NHP2Q9NX24 153 aaKnown RBP4.82□□□□□ -1.64
CLCN3-206ENST00000507875 DEFB130BP0DP73 79 aa4.81□□□□□ -1.64
CLCN3-206ENST00000507875 DEFB130AP0DP74 79 aa4.81□□□□□ -1.64
CLCN3-206ENST00000507875 CXCL5P42830 114 aa4.81□□□□□ -1.64
CLCN3-206ENST00000507875 RBM3P98179 157 aaKnown RBP4.81□□□□□ -1.64
CLCN3-206ENST00000507875 NKAPP1Q8N9T2 125 aa4.81□□□□□ -1.64
CLCN3-206ENST00000507875 FAM104AQ969W3 186 aa4.81□□□□□ -1.64
CLCN3-206ENST00000507875 AMELXQ99217 191 aa4.81□□□□□ -1.64
CLCN3-206ENST00000507875 LINC00474Q9P2X8 69 aa4.81□□□□□ -1.64
CLCN3-206ENST00000507875 CELA1Q9UNI1 258 aa4.81□□□□□ -1.64
CLCN3-206ENST00000507875 TMEM223A0PJW6 202 aa4.81□□□□□ -1.64
CLCN3-206ENST00000507875 LINC01554Q52M75 96 aa4.81□□□□□ -1.64
CLCN3-206ENST00000507875 ZNF22P17026 224 aaPredicted RBP4.8□□□□□ -1.64
CLCN3-206ENST00000507875 TSPEAR-AS2P59090 65 aa4.8□□□□□ -1.64
CLCN3-206ENST00000507875 CIRBPQ14011 172 aaKnown RBP4.8□□□□□ -1.64
CLCN3-206ENST00000507875 CEMP1Q6PRD7 247 aaPredicted RBP4.8□□□□□ -1.64
CLCN3-206ENST00000507875 PHF5AQ7RTV0 110 aaKnown RBP4.8□□□□□ -1.64
CLCN3-206ENST00000507875 UBE2D4Q9Y2X8 147 aa4.8□□□□□ -1.64
CLCN3-206ENST00000507875 DNAH3Q8TD57 4116 aa4.8□□□□□ -1.64
CLCN3-206ENST00000507875 A0A0J9YY99 117 aa4.8□□□□□ -1.64
CLCN3-206ENST00000507875 MRPS36P82909 103 aaKnown RBP4.8□□□□□ -1.64
CLCN3-206ENST00000507875 ICOSQ9Y6W8 199 aa4.8□□□□□ -1.64
CLCN3-206ENST00000507875 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.79□□□□□ -1.64
CLCN3-206ENST00000507875 IGKV2-29A2NJV5 120 aaPredicted RBP4.79□□□□□ -1.64
CLCN3-206ENST00000507875 LEPROTO15243 131 aa4.79□□□□□ -1.64
CLCN3-206ENST00000507875 XP32Q5T750 250 aa4.79□□□□□ -1.64
CLCN3-206ENST00000507875 SOSTDC1Q6X4U4 206 aa4.79□□□□□ -1.64
CLCN3-206ENST00000507875 C15orf53Q8NAA6 179 aa4.79□□□□□ -1.64
CLCN3-206ENST00000507875 TRAV10A0A0B4J240 114 aa4.79□□□□□ -1.64
CLCN3-206ENST00000507875 LITAFQ99732 161 aa4.79□□□□□ -1.64
CLCN3-206ENST00000507875 A0A0J9YWU9 116 aa4.78□□□□□ -1.64
CLCN3-206ENST00000507875 SPANXDQ9BXN6 97 aa4.78□□□□□ -1.64
CLCN3-206ENST00000507875 SCGB1C2P0DMR2 95 aa4.78□□□□□ -1.64
CLCN3-206ENST00000507875 RNASE13Q5GAN3 156 aaKnown RBP4.78□□□□□ -1.64
CLCN3-206ENST00000507875 LCE4AQ5TA78 99 aa4.78□□□□□ -1.64
CLCN3-206ENST00000507875 IGHV3-64A0A075B6Q5 118 aa4.77□□□□□ -1.65
CLCN3-206ENST00000507875 TRBV6-8A0A0A6YYG3 113 aa4.77□□□□□ -1.65
CLCN3-206ENST00000507875 C3orf84H3BNL1 204 aa4.77□□□□□ -1.65
CLCN3-206ENST00000507875 COL7A1Q02388 2944 aa4.77□□□□□ -1.65
CLCN3-206ENST00000507875 TRBV7-7A0A0K0K1E9 115 aa4.77□□□□□ -1.65
CLCN3-206ENST00000507875 IGHV3-30P01768 117 aa4.77□□□□□ -1.65
CLCN3-206ENST00000507875 IGHV3-30-3P0DP02 117 aa4.77□□□□□ -1.65
CLCN3-206ENST00000507875 IGHV3-30-5P0DP03 117 aa4.77□□□□□ -1.65
CLCN3-206ENST00000507875 UBE2D1P51668 147 aa4.77□□□□□ -1.65
CLCN3-206ENST00000507875 ADM2Q7Z4H4 148 aa4.77□□□□□ -1.65
CLCN3-206ENST00000507875 DAND5Q8N907 189 aa4.77□□□□□ -1.65
CLCN3-206ENST00000507875 DEFB4AO15263 64 aa4.76□□□□□ -1.65
CLCN3-206ENST00000507875 UBE2BP63146 152 aa4.75□□□□□ -1.65
CLCN3-206ENST00000507875 LELP1Q5T871 98 aa4.75□□□□□ -1.65
CLCN3-206ENST00000507875 NTM-AS1Q6ZSK4 140 aa4.75□□□□□ -1.65
CLCN3-206ENST00000507875 UPK3BQ9BT76 320 aa4.75□□□□□ -1.65
CLCN3-206ENST00000507875 DEFB131BA0A096LNP1 70 aa4.75□□□□□ -1.65
CLCN3-206ENST00000507875 KRTAP9-6A0A140TA67 174 aa4.75□□□□□ -1.65
CLCN3-206ENST00000507875 KRTAP9-7A8MTY7 169 aa4.75□□□□□ -1.65
CLCN3-206ENST00000507875 CFC1BP0CG36 223 aa4.75□□□□□ -1.65
CLCN3-206ENST00000507875 CFC1P0CG37 223 aa4.75□□□□□ -1.65
CLCN3-206ENST00000507875 MUC7Q8TAX7 377 aa4.75□□□□□ -1.65
CLCN3-206ENST00000507875 A0A0J9YXY3 114 aa4.74□□□□□ -1.65
CLCN3-206ENST00000507875 Q6ZTC4 211 aa4.74□□□□□ -1.65
CLCN3-206ENST00000507875 A0A096LPF7 62 aa4.74□□□□□ -1.65
CLCN3-206ENST00000507875 DIRC1Q969H9 104 aa4.74□□□□□ -1.65
CLCN3-206ENST00000507875 KRTAP9-4Q9BYQ2 154 aa4.74□□□□□ -1.65
CLCN3-206ENST00000507875 IGKV2-30P06310 120 aa4.73□□□□□ -1.65
CLCN3-206ENST00000507875 FUSP35637 526 aaKnown RBP eCLIP4.73□□□□□ -1.65
CLCN3-206ENST00000507875 C7orf65Q6ZTY9 151 aa4.73□□□□□ -1.65
CLCN3-206ENST00000507875 CDKN2A-AS1Q9UH64 79 aa4.73□□□□□ -1.65
CLCN3-206ENST00000507875 HTN3P15516 51 aa4.73□□□□□ -1.65
CLCN3-206ENST00000507875 CDC42SE2Q9NRR3 84 aa4.73□□□□□ -1.65
CLCN3-206ENST00000507875 NDUFA12Q9UI09 145 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms