RNA–Protein interactions for RNA: ENST00000507476.5

LINC01088-203, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3 BASIC

Gene LINC01088, Length 785 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-203ENST00000507476 USMG5Q96IX5 58 aa1.53□□□□□ -2.16
LINC01088-203ENST00000507476 CNFNQ9BYD5 112 aa1.53□□□□□ -2.16
LINC01088-203ENST00000507476 ASXL3Q9C0F0 2248 aa1.53□□□□□ -2.16
LINC01088-203ENST00000507476 TULP4Q9NRJ4 1543 aa1.53□□□□□ -2.16
LINC01088-203ENST00000507476 CFAP43Q8NDM7 1665 aa1.52□□□□□ -2.17
LINC01088-203ENST00000507476 ABCA9Q8IUA7 1624 aa1.52□□□□□ -2.17
LINC01088-203ENST00000507476 CICQ96RK0 1608 aaPredicted RBP1.52□□□□□ -2.17
LINC01088-203ENST00000507476 TIAM1Q13009 1591 aa1.52□□□□□ -2.17
LINC01088-203ENST00000507476 CDC42BPGQ6DT37 1551 aa1.52□□□□□ -2.17
LINC01088-203ENST00000507476 SPTY2D1-AS1A0A0U1RR47 76 aa1.52□□□□□ -2.17
LINC01088-203ENST00000507476 LINC00959A0A1B0GUT2 108 aa1.52□□□□□ -2.17
LINC01088-203ENST00000507476 CRIPTQ9P021 101 aa1.52□□□□□ -2.17
LINC01088-203ENST00000507476 USP32Q8NFA0 1604 aa1.51□□□□□ -2.17
LINC01088-203ENST00000507476 ANKRD50Q9ULJ7 1429 aa1.51□□□□□ -2.17
LINC01088-203ENST00000507476 PRO0255Q9UI72 69 aa1.51□□□□□ -2.17
LINC01088-203ENST00000507476 JMJD1CQ15652 2540 aa1.51□□□□□ -2.17
LINC01088-203ENST00000507476 ZNF831Q5JPB2 1677 aa1.51□□□□□ -2.17
LINC01088-203ENST00000507476 POLR1AO95602 1720 aaPredicted RBP1.5□□□□□ -2.17
LINC01088-203ENST00000507476 TIAM2Q8IVF5 1701 aa1.5□□□□□ -2.17
LINC01088-203ENST00000507476 COX7BP24311 80 aa1.5□□□□□ -2.17
LINC01088-203ENST00000507476 LAMC1P11047 1609 aa1.5□□□□□ -2.17
LINC01088-203ENST00000507476 EIF2AK4Q9P2K8 1649 aaKnown RBP1.5□□□□□ -2.17
LINC01088-203ENST00000507476 QSER1Q2KHR3 1735 aa1.49□□□□□ -2.17
LINC01088-203ENST00000507476 NHSQ6T4R5 1651 aa1.49□□□□□ -2.17
LINC01088-203ENST00000507476 A0A0D9SG42 100 aa1.49□□□□□ -2.17
LINC01088-203ENST00000507476 IFI6P09912 130 aa1.49□□□□□ -2.17
LINC01088-203ENST00000507476 HILPDAQ9Y5L2 63 aa1.49□□□□□ -2.17
LINC01088-203ENST00000507476 SLIT1O75093 1534 aa1.49□□□□□ -2.17
LINC01088-203ENST00000507476 LMTK2Q8IWU2 1503 aa1.49□□□□□ -2.17
LINC01088-203ENST00000507476 BCORQ6W2J9 1755 aa1.49□□□□□ -2.17
LINC01088-203ENST00000507476 ROS1P08922 2347 aa1.49□□□□□ -2.17
LINC01088-203ENST00000507476 COL6A6A6NMZ7 2263 aa1.49□□□□□ -2.17
LINC01088-203ENST00000507476 AHCTF1Q8WYP5 2266 aa1.49□□□□□ -2.17
LINC01088-203ENST00000507476 WIZO95785 1651 aa1.48□□□□□ -2.17
LINC01088-203ENST00000507476 I3L3M4 83 aa1.48□□□□□ -2.17
LINC01088-203ENST00000507476 HMGA1P17096 107 aaKnown RBP1.48□□□□□ -2.17
LINC01088-203ENST00000507476 ATXN8Q156A1 80 aa1.48□□□□□ -2.17
LINC01088-203ENST00000507476 PARP4Q9UKK3 1724 aaKnown RBP1.48□□□□□ -2.17
LINC01088-203ENST00000507476 ANKRD17O75179 2603 aaKnown RBP1.48□□□□□ -2.17
LINC01088-203ENST00000507476 LCE6AA0A183 80 aa1.47□□□□□ -2.17
LINC01088-203ENST00000507476 NREPQ16612 68 aa1.47□□□□□ -2.17
LINC01088-203ENST00000507476 COL14A1Q05707 1796 aaKnown RBP1.47□□□□□ -2.17
LINC01088-203ENST00000507476 RALGAPBQ86X10 1494 aa1.46□□□□□ -2.18
LINC01088-203ENST00000507476 Q8IZM0 81 aa1.46□□□□□ -2.18
LINC01088-203ENST00000507476 FAM208BQ5VWN6 2430 aa1.45□□□□□ -2.18
LINC01088-203ENST00000507476 KRTAP10-4P60372 401 aaPredicted RBP1.45□□□□□ -2.18
LINC01088-203ENST00000507476 FAM103A1Q9BTL3 118 aaKnown RBP1.45□□□□□ -2.18
LINC01088-203ENST00000507476 UBR3Q6ZT12 1888 aa1.45□□□□□ -2.18
LINC01088-203ENST00000507476 SFTA3P0C7M3 94 aa1.44□□□□□ -2.18
LINC01088-203ENST00000507476 PREX2Q70Z35 1606 aa1.44□□□□□ -2.18
LINC01088-203ENST00000507476 SRCAPQ6ZRS2 3230 aa1.44□□□□□ -2.18
LINC01088-203ENST00000507476 DIP2AQ14689 1571 aa1.43□□□□□ -2.18
LINC01088-203ENST00000507476 I3L2K1 104 aa1.43□□□□□ -2.18
LINC01088-203ENST00000507476 C3orf79P0CE67 100 aa1.43□□□□□ -2.18
LINC01088-203ENST00000507476 DOT1LQ8TEK3 1739 aa1.43□□□□□ -2.18
LINC01088-203ENST00000507476 SMIM5Q71RC9 77 aa1.42□□□□□ -2.18
LINC01088-203ENST00000507476 DEFB123Q8N688 67 aa1.42□□□□□ -2.18
LINC01088-203ENST00000507476 GOLGA4Q13439 2230 aaKnown RBP1.42□□□□□ -2.18
LINC01088-203ENST00000507476 PREX1Q8TCU6 1659 aa1.41□□□□□ -2.18
LINC01088-203ENST00000507476 EEA1Q15075 1411 aa1.4□□□□□ -2.18
LINC01088-203ENST00000507476 PLXNC1O60486 1568 aa1.4□□□□□ -2.19
LINC01088-203ENST00000507476 CPSF4LA6NMK7 179 aaKnown RBP1.4□□□□□ -2.19
LINC01088-203ENST00000507476 COX6B1P14854 86 aa1.4□□□□□ -2.19
LINC01088-203ENST00000507476 RICTORQ6R327 1708 aa1.4□□□□□ -2.19
LINC01088-203ENST00000507476 K7EQZ3 153 aa1.39□□□□□ -2.19
LINC01088-203ENST00000507476 ABCA6Q8N139 1617 aa1.39□□□□□ -2.19
LINC01088-203ENST00000507476 URB1O60287 2271 aaKnown RBP1.38□□□□□ -2.19
LINC01088-203ENST00000507476 NWD1Q149M9 1564 aa1.38□□□□□ -2.19
LINC01088-203ENST00000507476 ASH1LQ9NR48 2969 aaKnown RBP1.38□□□□□ -2.19
LINC01088-203ENST00000507476 NDUFA4O00483 81 aa1.38□□□□□ -2.19
LINC01088-203ENST00000507476 CCL22O00626 93 aa1.38□□□□□ -2.19
LINC01088-203ENST00000507476 NRAPQ86VF7 1730 aa1.37□□□□□ -2.19
LINC01088-203ENST00000507476 FMN2Q9NZ56 1722 aa1.37□□□□□ -2.19
LINC01088-203ENST00000507476 ABCA10Q8WWZ4 1543 aa1.37□□□□□ -2.19
LINC01088-203ENST00000507476 UBL5Q9BZL1 73 aa1.37□□□□□ -2.19
LINC01088-203ENST00000507476 FXYD6Q9H0Q3 95 aa1.36□□□□□ -2.19
LINC01088-203ENST00000507476 ALS2Q96Q42 1657 aa1.35□□□□□ -2.19
LINC01088-203ENST00000507476 MAST1Q9Y2H9 1570 aa1.35□□□□□ -2.19
LINC01088-203ENST00000507476 MRPL34Q9BQ48 92 aaKnown RBP1.35□□□□□ -2.19
LINC01088-203ENST00000507476 TSC2P49815 1807 aa1.35□□□□□ -2.19
LINC01088-203ENST00000507476 ENHOQ6UWT2 76 aa1.34□□□□□ -2.19
LINC01088-203ENST00000507476 NESP48681 1621 aa1.33□□□□□ -2.2
LINC01088-203ENST00000507476 PRXQ9BXM0 1461 aa1.33□□□□□ -2.2
LINC01088-203ENST00000507476 MRPL33O75394 65 aaKnown RBP1.33□□□□□ -2.2
LINC01088-203ENST00000507476 ABCC6O95255 1503 aa1.33□□□□□ -2.2
LINC01088-203ENST00000507476 HELZ2Q9BYK8 2649 aaKnown RBP1.32□□□□□ -2.2
LINC01088-203ENST00000507476 LINC01549A6NIU2 74 aa1.32□□□□□ -2.2
LINC01088-203ENST00000507476 BIVM-ERCC5R4GMW8 1640 aa1.32□□□□□ -2.2
LINC01088-203ENST00000507476 CACNA1EQ15878 2313 aa1.32□□□□□ -2.2
LINC01088-203ENST00000507476 GLI2P10070 1586 aa1.31□□□□□ -2.2
LINC01088-203ENST00000507476 APLNQ9ULZ1 77 aa1.31□□□□□ -2.2
LINC01088-203ENST00000507476 CEP350Q5VT06 3117 aa1.3□□□□□ -2.2
LINC01088-203ENST00000507476 DDX60LQ5H9U9 1706 aaKnown RBP1.3□□□□□ -2.2
LINC01088-203ENST00000507476 Q5VSD8 79 aa1.3□□□□□ -2.2
LINC01088-203ENST00000507476 TNRC6CQ9HCJ0 1690 aaKnown RBP1.29□□□□□ -2.2
LINC01088-203ENST00000507476 SPINK4O60575 86 aa1.29□□□□□ -2.2
LINC01088-203ENST00000507476 PRB3Q04118 309 aaPredicted RBP1.29□□□□□ -2.2
LINC01088-203ENST00000507476 COX6B2Q6YFQ2 88 aa1.29□□□□□ -2.2
LINC01088-203ENST00000507476 KCNQ1DNQ9H478 68 aa1.29□□□□□ -2.2
LINC01088-203ENST00000507476 CDKN2A-AS1Q9UH64 79 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms