RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 MAJINQ3KP22 176 aa1.46□□□□□ -2.18
TOPBP1-205ENST00000506779 NTM-AS1Q6ZSK4 140 aa1.46□□□□□ -2.18
TOPBP1-205ENST00000506779 SBSPONQ8IVN8 264 aa1.46□□□□□ -2.18
TOPBP1-205ENST00000506779 LINC00469Q8N7U9 141 aa1.46□□□□□ -2.18
TOPBP1-205ENST00000506779 B9D2Q9BPU9 175 aa1.46□□□□□ -2.18
TOPBP1-205ENST00000506779 TM2D3Q9BRN9 247 aa1.46□□□□□ -2.18
TOPBP1-205ENST00000506779 CHAC1Q9BUX1 264 aa1.46□□□□□ -2.18
TOPBP1-205ENST00000506779 NSD1Q96L73 2696 aaPredicted RBP1.46□□□□□ -2.18
TOPBP1-205ENST00000506779 MEGF8Q7Z7M0 2845 aa1.45□□□□□ -2.18
TOPBP1-205ENST00000506779 TRAV8-3A0A0A6YYJ7 113 aa1.45□□□□□ -2.18
TOPBP1-205ENST00000506779 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.45□□□□□ -2.18
TOPBP1-205ENST00000506779 TRAV13-1A0A0B4J241 112 aa1.45□□□□□ -2.18
TOPBP1-205ENST00000506779 A0A0J9YXV3 536 aa1.45□□□□□ -2.18
TOPBP1-205ENST00000506779 A0A0J9YY99 117 aa1.45□□□□□ -2.18
TOPBP1-205ENST00000506779 LINC00959A0A1B0GUT2 108 aa1.45□□□□□ -2.18
TOPBP1-205ENST00000506779 COX7A2LO14548 114 aa1.45□□□□□ -2.18
TOPBP1-205ENST00000506779 TIMM17BO60830 172 aa1.45□□□□□ -2.18
TOPBP1-205ENST00000506779 CRPP02741 224 aa1.45□□□□□ -2.18
TOPBP1-205ENST00000506779 ANGP03950 147 aaKnown RBP1.45□□□□□ -2.18
TOPBP1-205ENST00000506779 TLX1NBP0CAT3 122 aa1.45□□□□□ -2.18
TOPBP1-205ENST00000506779 SMIM13P0DJ93 91 aa1.45□□□□□ -2.18
TOPBP1-205ENST00000506779 IGHV3-30-3P0DP02 117 aa1.45□□□□□ -2.18
TOPBP1-205ENST00000506779 IFITM1P13164 125 aa1.45□□□□□ -2.18
TOPBP1-205ENST00000506779 CKS1BP61024 79 aa1.45□□□□□ -2.18
TOPBP1-205ENST00000506779 RBX1P62877 108 aa1.45□□□□□ -2.18
TOPBP1-205ENST00000506779 BATFQ16520 125 aa1.45□□□□□ -2.18
TOPBP1-205ENST00000506779 MIAQ16674 131 aa1.45□□□□□ -2.18
TOPBP1-205ENST00000506779 MPV17L2Q567V2 206 aa1.45□□□□□ -2.18
TOPBP1-205ENST00000506779 C6orf226Q5I0X4 101 aa1.45□□□□□ -2.18
TOPBP1-205ENST00000506779 ZFAND6Q6FIF0 208 aa1.45□□□□□ -2.18
TOPBP1-205ENST00000506779 CEMP1Q6PRD7 247 aaPredicted RBP1.45□□□□□ -2.18
TOPBP1-205ENST00000506779 LYPD5Q6UWN5 251 aa1.45□□□□□ -2.18
TOPBP1-205ENST00000506779 Q6ZUT4 128 aa1.45□□□□□ -2.18
TOPBP1-205ENST00000506779 PCP2Q8IVA1 136 aa1.45□□□□□ -2.18
TOPBP1-205ENST00000506779 C10orf126Q8N4M7 172 aa1.45□□□□□ -2.18
TOPBP1-205ENST00000506779 MUC7Q8TAX7 377 aa1.45□□□□□ -2.18
TOPBP1-205ENST00000506779 DEFB104AQ8WTQ1 72 aa1.45□□□□□ -2.18
TOPBP1-205ENST00000506779 ORAOV1Q8WV07 137 aa1.45□□□□□ -2.18
TOPBP1-205ENST00000506779 RMI2Q96E14 147 aa1.45□□□□□ -2.18
TOPBP1-205ENST00000506779 SNHG12Q9BXW3 62 aa1.45□□□□□ -2.18
TOPBP1-205ENST00000506779 SPANXB1Q9NS25 103 aaPredicted RBP1.45□□□□□ -2.18
TOPBP1-205ENST00000506779 CDKN2A-AS1Q9UH64 79 aa1.45□□□□□ -2.18
TOPBP1-205ENST00000506779 KLK5Q9Y337 293 aaPredicted RBP1.45□□□□□ -2.18
TOPBP1-205ENST00000506779 ZANQ9Y493 2812 aa1.44□□□□□ -2.18
TOPBP1-205ENST00000506779 IGKV2-28A0A075B6P5 120 aa1.44□□□□□ -2.18
TOPBP1-205ENST00000506779 A0A096LPF7 62 aa1.44□□□□□ -2.18
TOPBP1-205ENST00000506779 IGKV2D-26A0A0A0MRZ7 120 aa1.44□□□□□ -2.18
TOPBP1-205ENST00000506779 IGHV3OR16-9A0A0B4J2B5 98 aa1.44□□□□□ -2.18
TOPBP1-205ENST00000506779 A0A1B0GVX0 72 aa1.44□□□□□ -2.18
TOPBP1-205ENST00000506779 NUPR2A6NF83 97 aa1.44□□□□□ -2.18
TOPBP1-205ENST00000506779 K7EIL1 84 aa1.44□□□□□ -2.18
TOPBP1-205ENST00000506779 NDUFA1O15239 70 aa1.44□□□□□ -2.18
TOPBP1-205ENST00000506779 IGKV2D-28P01615 120 aa1.44□□□□□ -2.18
TOPBP1-205ENST00000506779 ZNF22P17026 224 aaPredicted RBP1.44□□□□□ -2.18
TOPBP1-205ENST00000506779 UBE2AP49459 152 aa1.44□□□□□ -2.18
TOPBP1-205ENST00000506779 HINT1P49773 126 aaPredicted RBP1.44□□□□□ -2.18
TOPBP1-205ENST00000506779 COX17Q14061 63 aa1.44□□□□□ -2.18
TOPBP1-205ENST00000506779 LINC01556Q5JQF7 62 aa1.44□□□□□ -2.18
TOPBP1-205ENST00000506779 MEIG1Q5JSS6 88 aa1.44□□□□□ -2.18
TOPBP1-205ENST00000506779 BVES-AS1Q5T3Y7 98 aa1.44□□□□□ -2.18
TOPBP1-205ENST00000506779 LYRM7Q5U5X0 104 aa1.44□□□□□ -2.18
TOPBP1-205ENST00000506779 Q5W150 140 aa1.44□□□□□ -2.18
TOPBP1-205ENST00000506779 C2orf91Q6ZV80 131 aa1.44□□□□□ -2.18
TOPBP1-205ENST00000506779 GTF2H5Q6ZYL4 71 aa1.44□□□□□ -2.18
TOPBP1-205ENST00000506779 Q8IZM0 81 aa1.44□□□□□ -2.18
TOPBP1-205ENST00000506779 LINC00269Q8N2A0 174 aa1.44□□□□□ -2.18
TOPBP1-205ENST00000506779 COX7B2Q8TF08 81 aa1.44□□□□□ -2.18
TOPBP1-205ENST00000506779 TP73-AS1Q9UF72 201 aa1.44□□□□□ -2.18
TOPBP1-205ENST00000506779 NDUFA12Q9UI09 145 aa1.44□□□□□ -2.18
TOPBP1-205ENST00000506779 ZNF469Q96JG9 3925 aaPredicted RBP1.44□□□□□ -2.18
TOPBP1-205ENST00000506779 IGLV4-60A0A075B6I1 120 aa1.43□□□□□ -2.18
TOPBP1-205ENST00000506779 TRBV20-1A0A075B6N2 111 aa1.43□□□□□ -2.18
TOPBP1-205ENST00000506779 IGHV3-64A0A075B6Q5 118 aa1.43□□□□□ -2.18
TOPBP1-205ENST00000506779 IGKV3OR2-268A0A0C4DH90 116 aa1.43□□□□□ -2.18
TOPBP1-205ENST00000506779 IBA57-AS1B1ANH7 110 aa1.43□□□□□ -2.18
TOPBP1-205ENST00000506779 IGLL5B9A064 214 aa1.43□□□□□ -2.18
TOPBP1-205ENST00000506779 SNCGO76070 127 aa1.43□□□□□ -2.18
TOPBP1-205ENST00000506779 COX6CP09669 75 aa1.43□□□□□ -2.18
TOPBP1-205ENST00000506779 SPINK8P0C7L1 97 aa1.43□□□□□ -2.18
TOPBP1-205ENST00000506779 FABP2P12104 132 aa1.43□□□□□ -2.18
TOPBP1-205ENST00000506779 XCL1P47992 114 aa1.43□□□□□ -2.18
TOPBP1-205ENST00000506779 VAMP3Q15836 100 aa1.43□□□□□ -2.18
TOPBP1-205ENST00000506779 ESRGQ1W209 222 aa1.43□□□□□ -2.18
TOPBP1-205ENST00000506779 RNASE13Q5GAN3 156 aaKnown RBP1.43□□□□□ -2.18
TOPBP1-205ENST00000506779 RAB37Q96AX2 223 aa1.43□□□□□ -2.18
TOPBP1-205ENST00000506779 UBE2WQ96B02 151 aa1.43□□□□□ -2.18
TOPBP1-205ENST00000506779 UPK3BQ9BT76 320 aa1.43□□□□□ -2.18
TOPBP1-205ENST00000506779 SPANXDQ9BXN6 97 aa1.43□□□□□ -2.18
TOPBP1-205ENST00000506779 RETNQ9HD89 108 aa1.43□□□□□ -2.18
TOPBP1-205ENST00000506779 SPANXCQ9NY87 97 aa1.43□□□□□ -2.18
TOPBP1-205ENST00000506779 TOMM7Q9P0U1 55 aa1.43□□□□□ -2.18
TOPBP1-205ENST00000506779 PRO1854Q9UHT4 67 aa1.43□□□□□ -2.18
TOPBP1-205ENST00000506779 PKIGQ9Y2B9 76 aa1.43□□□□□ -2.18
TOPBP1-205ENST00000506779 CBY1Q9Y3M2 126 aa1.43□□□□□ -2.18
TOPBP1-205ENST00000506779 WNK1Q9H4A3 2382 aa1.43□□□□□ -2.18
TOPBP1-205ENST00000506779 CUBNO60494 3623 aa1.42□□□□□ -2.18
TOPBP1-205ENST00000506779 ANK3Q12955 4377 aaKnown RBP1.42□□□□□ -2.18
TOPBP1-205ENST00000506779 GVQW2A0A096LPI5 108 aaPredicted RBP1.42□□□□□ -2.18
TOPBP1-205ENST00000506779 TRAV13-2A0A0B4J235 113 aa1.42□□□□□ -2.18
TOPBP1-205ENST00000506779 A0A0B4J2C4 111 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms