RNA–Protein interactions for RNA: ENST00000506542.1

SERF1B-204, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 3 BASIC

Gene SERF1B, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-204ENST00000506542 APOBP04114 4563 aaKnown RBP9.09□□□□□ -0.95
SERF1B-204ENST00000506542 HSPG2P98160 4391 aa9.08□□□□□ -0.96
SERF1B-204ENST00000506542 F8WDY8 70 aa9.08□□□□□ -0.96
SERF1B-204ENST00000506542 PSCAO43653 123 aa9.08□□□□□ -0.96
SERF1B-204ENST00000506542 SOSTDC1Q6X4U4 206 aa9.08□□□□□ -0.96
SERF1B-204ENST00000506542 LRCOL1A6NCL2 159 aa9.07□□□□□ -0.96
SERF1B-204ENST00000506542 USP17L23D6RBM5 183 aa9.07□□□□□ -0.96
SERF1B-204ENST00000506542 KRTAP17-1Q9BYP8 105 aa9.07□□□□□ -0.96
SERF1B-204ENST00000506542 PCLOQ9Y6V0 5065 aa9.07□□□□□ -0.96
SERF1B-204ENST00000506542 CFC1BP0CG36 223 aa9.07□□□□□ -0.96
SERF1B-204ENST00000506542 CFC1P0CG37 223 aa9.07□□□□□ -0.96
SERF1B-204ENST00000506542 C9orf116Q5BN46 136 aaPredicted RBP9.07□□□□□ -0.96
SERF1B-204ENST00000506542 LINC00528Q8N1L1 170 aa9.07□□□□□ -0.96
SERF1B-204ENST00000506542 CAMK2N2Q96S95 79 aa9.07□□□□□ -0.96
SERF1B-204ENST00000506542 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.06□□□□□ -0.96
SERF1B-204ENST00000506542 TRBV30A0A0K0K1B3 111 aa9.06□□□□□ -0.96
SERF1B-204ENST00000506542 A0A1B0GV90 55 aa9.06□□□□□ -0.96
SERF1B-204ENST00000506542 RAB37Q96AX2 223 aa9.06□□□□□ -0.96
SERF1B-204ENST00000506542 C6orf48Q9UBA6 75 aa9.06□□□□□ -0.96
SERF1B-204ENST00000506542 A0A0B4J2C4 111 aa9.05□□□□□ -0.96
SERF1B-204ENST00000506542 J3QL48 77 aa9.05□□□□□ -0.96
SERF1B-204ENST00000506542 Q6ZRU5 148 aa9.04□□□□□ -0.96
SERF1B-204ENST00000506542 C9orf118A6NHY6 69 aa9.04□□□□□ -0.96
SERF1B-204ENST00000506542 ABCA13Q86UQ4 5058 aa9.02□□□□□ -0.97
SERF1B-204ENST00000506542 LOC107984156A0A0G2JMH3 177 aa9.02□□□□□ -0.97
SERF1B-204ENST00000506542 GAGE10A6NGK3 116 aa9.02□□□□□ -0.97
SERF1B-204ENST00000506542 SYCNQ0VAF6 134 aa9.02□□□□□ -0.97
SERF1B-204ENST00000506542 ARL17AQ8IVW1 177 aa9.02□□□□□ -0.97
SERF1B-204ENST00000506542 PRO1854Q9UHT4 67 aa9.02□□□□□ -0.97
SERF1B-204ENST00000506542 KRTAP10-1P60331 282 aa9.01□□□□□ -0.97
SERF1B-204ENST00000506542 SND1-IT1Q9HBX3 110 aa9.01□□□□□ -0.97
SERF1B-204ENST00000506542 IGLV2-33A0A075B6J2 118 aaPredicted RBP9□□□□□ -0.97
SERF1B-204ENST00000506542 H3BUT2 72 aa9□□□□□ -0.97
SERF1B-204ENST00000506542 Q8N814 137 aa9□□□□□ -0.97
SERF1B-204ENST00000506542 SLPIP03973 132 aa9□□□□□ -0.97
SERF1B-204ENST00000506542 HAMPP81172 84 aa9□□□□□ -0.97
SERF1B-204ENST00000506542 LINC01620Q4KN68 170 aa9□□□□□ -0.97
SERF1B-204ENST00000506542 CARD19Q96LW7 228 aa9□□□□□ -0.97
SERF1B-204ENST00000506542 NAA38Q9BRA0 125 aaKnown RBP9□□□□□ -0.97
SERF1B-204ENST00000506542 RNF151Q2KHN1 245 aa8.99□□□□□ -0.97
SERF1B-204ENST00000506542 TSPAN13O95857 204 aa8.98□□□□□ -0.97
SERF1B-204ENST00000506542 KRTAP4-5Q9BYR2 181 aa8.98□□□□□ -0.97
SERF1B-204ENST00000506542 NDUFC2-KCTD14E9PQ53 114 aa8.97□□□□□ -0.97
SERF1B-204ENST00000506542 C14orf177Q52M58 125 aa8.97□□□□□ -0.97
SERF1B-204ENST00000506542 IGKV2-28A0A075B6P5 120 aa8.97□□□□□ -0.97
SERF1B-204ENST00000506542 IGLV5-52A0A0A0MRZ9 124 aa8.97□□□□□ -0.97
SERF1B-204ENST00000506542 IGKV2D-28P01615 120 aa8.97□□□□□ -0.97
SERF1B-204ENST00000506542 A0A1W2PPM0 123 aa8.96□□□□□ -0.98
SERF1B-204ENST00000506542 NDUFC2O95298 119 aa8.96□□□□□ -0.98
SERF1B-204ENST00000506542 TLX1NBP0CAT3 122 aa8.95□□□□□ -0.98
SERF1B-204ENST00000506542 RPL13AP40429 203 aaKnown RBP8.95□□□□□ -0.98
SERF1B-204ENST00000506542 CNBPP62633 177 aaKnown RBP8.94□□□□□ -0.98
SERF1B-204ENST00000506542 VAMP3Q15836 100 aa8.94□□□□□ -0.98
SERF1B-204ENST00000506542 LINC00337Q8N6G1 96 aa8.94□□□□□ -0.98
SERF1B-204ENST00000506542 TRAV13-2A0A0B4J235 113 aa8.94□□□□□ -0.98
SERF1B-204ENST00000506542 H7C2G1 150 aa8.94□□□□□ -0.98
SERF1B-204ENST00000506542 CDK2AP2O75956 126 aa8.94□□□□□ -0.98
SERF1B-204ENST00000506542 FABP2P12104 132 aa8.94□□□□□ -0.98
SERF1B-204ENST00000506542 Q1RN00 199 aa8.94□□□□□ -0.98
SERF1B-204ENST00000506542 Q6ZRP5 223 aa8.94□□□□□ -0.98
SERF1B-204ENST00000506542 XAGE1AQ9HD64 81 aa8.94□□□□□ -0.98
SERF1B-204ENST00000506542 FAM30AQ9NZY2 134 aa8.94□□□□□ -0.98
SERF1B-204ENST00000506542 DNAH8Q96JB1 4490 aa8.93□□□□□ -0.98
SERF1B-204ENST00000506542 Q8NDZ9 215 aa8.93□□□□□ -0.98
SERF1B-204ENST00000506542 XGP55808 180 aa8.92□□□□□ -0.98
SERF1B-204ENST00000506542 GAGE2EQ4V326 116 aa8.91□□□□□ -0.98
SERF1B-204ENST00000506542 GAGE2DQ9UEU5 116 aa8.91□□□□□ -0.98
SERF1B-204ENST00000506542 FAT1Q14517 4588 aa8.91□□□□□ -0.98
SERF1B-204ENST00000506542 RPL18AQ02543 176 aaKnown RBP8.91□□□□□ -0.98
SERF1B-204ENST00000506542 LOC107984640A0A0U1RRK4 108 aa8.9□□□□□ -0.98
SERF1B-204ENST00000506542 PRR3P79522 188 aaKnown RBP8.9□□□□□ -0.98
SERF1B-204ENST00000506542 SPCS1Q9Y6A9 102 aa8.9□□□□□ -0.98
SERF1B-204ENST00000506542 K7EP34 96 aa8.89□□□□□ -0.99
SERF1B-204ENST00000506542 PSMB2P49721 201 aa8.89□□□□□ -0.99
SERF1B-204ENST00000506542 C9orf129Q5T035 196 aaKnown RBP8.89□□□□□ -0.99
SERF1B-204ENST00000506542 LYRM7Q5U5X0 104 aa8.89□□□□□ -0.99
SERF1B-204ENST00000506542 NCR3O14931 201 aa8.88□□□□□ -0.99
SERF1B-204ENST00000506542 TRIAP1O43715 76 aa8.88□□□□□ -0.99
SERF1B-204ENST00000506542 TRBV10-2A0A0K0K1G8 114 aa8.88□□□□□ -0.99
SERF1B-204ENST00000506542 SMR3BP02814 79 aaPredicted RBP8.88□□□□□ -0.99
SERF1B-204ENST00000506542 VPREB1P12018 145 aa8.88□□□□□ -0.99
SERF1B-204ENST00000506542 UBE2V1Q13404 147 aa8.88□□□□□ -0.99
SERF1B-204ENST00000506542 GTF2H5Q6ZYL4 71 aa8.88□□□□□ -0.99
SERF1B-204ENST00000506542 SRRM2Q9UQ35 2752 aaKnown RBP8.87□□□□□ -0.99
SERF1B-204ENST00000506542 OR13C6PQ8NH95 151 aa8.87□□□□□ -0.99
SERF1B-204ENST00000506542 SCGB1C2P0DMR2 95 aa8.86□□□□□ -0.99
SERF1B-204ENST00000506542 TMEM126AQ9H061 195 aa8.86□□□□□ -0.99
SERF1B-204ENST00000506542 COX6CP09669 75 aa8.85□□□□□ -0.99
SERF1B-204ENST00000506542 RPL28P46779 137 aaKnown RBP8.85□□□□□ -0.99
SERF1B-204ENST00000506542 GAGE2BQ13066 116 aa8.85□□□□□ -0.99
SERF1B-204ENST00000506542 C9orf163Q8N9P6 203 aa8.85□□□□□ -0.99
SERF1B-204ENST00000506542 SMIM11BQ8TCY0 68 aa8.85□□□□□ -0.99
SERF1B-204ENST00000506542 PLA2G2DQ9UNK4 145 aa8.85□□□□□ -0.99
SERF1B-204ENST00000506542 TRBV20-1A0A075B6N2 111 aa8.84□□□□□ -0.99
SERF1B-204ENST00000506542 S100A7L2Q5SY68 101 aa8.84□□□□□ -0.99
SERF1B-204ENST00000506542 VPS13BQ7Z7G8 4022 aa8.83□□□□□ -1
SERF1B-204ENST00000506542 TCL1BO95988 128 aa8.83□□□□□ -1
SERF1B-204ENST00000506542 IGLV6-57P01721 117 aa8.83□□□□□ -1
SERF1B-204ENST00000506542 Q8N1X5 172 aa8.83□□□□□ -1
SERF1B-204ENST00000506542 A0A096LNI7 61 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms