RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 CEP170BQ9Y4F5 1589 aaPredicted RBP0.34□□□□□ -2.36
TOPBP1-204ENST00000505804 TMEM131LA2VDJ0 1609 aa0.34□□□□□ -2.36
TOPBP1-204ENST00000505804 KIAA0556O60303 1618 aa0.34□□□□□ -2.36
TOPBP1-204ENST00000505804 LAMC1P11047 1609 aa0.34□□□□□ -2.36
TOPBP1-204ENST00000505804 MADDQ8WXG6 1647 aa0.34□□□□□ -2.36
TOPBP1-204ENST00000505804 ANK3Q12955 4377 aaKnown RBP0.34□□□□□ -2.36
TOPBP1-204ENST00000505804 PDCD11Q14690 1871 aaKnown RBP0.33□□□□□ -2.36
TOPBP1-204ENST00000505804 FAT2Q9NYQ8 4349 aa0.33□□□□□ -2.36
TOPBP1-204ENST00000505804 SMARCA2P51531 1590 aa0.33□□□□□ -2.36
TOPBP1-204ENST00000505804 CTXND1A0A1B0GTU2 59 aa0.33□□□□□ -2.36
TOPBP1-204ENST00000505804 NAP1L6A6NFF2 107 aa0.33□□□□□ -2.36
TOPBP1-204ENST00000505804 TMEM262E9PQX1 116 aa0.33□□□□□ -2.36
TOPBP1-204ENST00000505804 H3BQ15 152 aa0.33□□□□□ -2.36
TOPBP1-204ENST00000505804 RBP2P50120 134 aa0.33□□□□□ -2.36
TOPBP1-204ENST00000505804 GNG11P61952 73 aa0.33□□□□□ -2.36
TOPBP1-204ENST00000505804 UBE2DNLQ8IWF7 75 aa0.33□□□□□ -2.36
TOPBP1-204ENST00000505804 SMIM4Q8WVI0 70 aa0.33□□□□□ -2.36
TOPBP1-204ENST00000505804 FAM167A-AS1Q96KT0 104 aa0.33□□□□□ -2.36
TOPBP1-204ENST00000505804 WIZO95785 1651 aa0.33□□□□□ -2.36
TOPBP1-204ENST00000505804 CACNA1CQ13936 2221 aa0.33□□□□□ -2.36
TOPBP1-204ENST00000505804 DNAH10Q8IVF4 4471 aa0.32□□□□□ -2.36
TOPBP1-204ENST00000505804 VPS8Q8N3P4 1428 aa0.32□□□□□ -2.36
TOPBP1-204ENST00000505804 TRAV30A0A087WSZ9 112 aa0.32□□□□□ -2.36
TOPBP1-204ENST00000505804 LOC285095A0A1B0GVY8 99 aa0.32□□□□□ -2.36
TOPBP1-204ENST00000505804 IGLC7A0M8Q6 106 aa0.32□□□□□ -2.36
TOPBP1-204ENST00000505804 TMEM218A2RU14 115 aa0.32□□□□□ -2.36
TOPBP1-204ENST00000505804 F8VRH5 84 aa0.32□□□□□ -2.36
TOPBP1-204ENST00000505804 CHKB-CPT1BH3BT56 60 aa0.32□□□□□ -2.36
TOPBP1-204ENST00000505804 UQCR11O14957 56 aa0.32□□□□□ -2.36
TOPBP1-204ENST00000505804 SNCAP37840 140 aa0.32□□□□□ -2.36
TOPBP1-204ENST00000505804 Q0VG73 95 aa0.32□□□□□ -2.36
TOPBP1-204ENST00000505804 COX17Q14061 63 aa0.32□□□□□ -2.36
TOPBP1-204ENST00000505804 BAGE2Q86Y30 109 aa0.32□□□□□ -2.36
TOPBP1-204ENST00000505804 NPVFQ9HCQ7 196 aa0.32□□□□□ -2.36
TOPBP1-204ENST00000505804 CDC42SE2Q9NRR3 84 aa0.32□□□□□ -2.36
TOPBP1-204ENST00000505804 UQCR10Q9UDW1 63 aa0.32□□□□□ -2.36
TOPBP1-204ENST00000505804 FYCO1Q9BQS8 1478 aa0.32□□□□□ -2.36
TOPBP1-204ENST00000505804 MYO7BQ6PIF6 2116 aa0.32□□□□□ -2.36
TOPBP1-204ENST00000505804 MUC17Q685J3 4493 aa0.32□□□□□ -2.36
TOPBP1-204ENST00000505804 KIF21BO75037 1637 aa0.31□□□□□ -2.36
TOPBP1-204ENST00000505804 AHCTF1Q8WYP5 2266 aa0.31□□□□□ -2.36
TOPBP1-204ENST00000505804 MAP3K4Q9Y6R4 1608 aa0.31□□□□□ -2.36
TOPBP1-204ENST00000505804 ABCC5O15440 1437 aa0.31□□□□□ -2.36
TOPBP1-204ENST00000505804 TEX14Q8IWB6 1497 aa0.31□□□□□ -2.36
TOPBP1-204ENST00000505804 TRAV22A0A0B4J277 110 aa0.31□□□□□ -2.36
TOPBP1-204ENST00000505804 CRYM-AS1A6NIL9 109 aa0.31□□□□□ -2.36
TOPBP1-204ENST00000505804 PIN1P1O15428 100 aa0.31□□□□□ -2.36
TOPBP1-204ENST00000505804 APOC3P02656 99 aa0.31□□□□□ -2.36
TOPBP1-204ENST00000505804 UBE2D3P61077 147 aa0.31□□□□□ -2.36
TOPBP1-204ENST00000505804 UBE2D2P62837 147 aa0.31□□□□□ -2.36
TOPBP1-204ENST00000505804 COX6A2Q02221 97 aa0.31□□□□□ -2.36
TOPBP1-204ENST00000505804 LINC00472Q9H8W2 130 aa0.31□□□□□ -2.36
TOPBP1-204ENST00000505804 LINC01558Q9Y6Z2 57 aa0.31□□□□□ -2.36
TOPBP1-204ENST00000505804 PKHD1L1Q86WI1 4243 aa0.3□□□□□ -2.36
TOPBP1-204ENST00000505804 CLTCQ00610 1675 aaKnown RBP0.3□□□□□ -2.36
TOPBP1-204ENST00000505804 NRXN1Q9ULB1 1477 aa0.3□□□□□ -2.36
TOPBP1-204ENST00000505804 PRDM15P57071 1507 aaPredicted RBP0.3□□□□□ -2.36
TOPBP1-204ENST00000505804 MAP3K1Q13233 1512 aa0.3□□□□□ -2.36
TOPBP1-204ENST00000505804 ZNF815PA8K554 130 aa0.3□□□□□ -2.36
TOPBP1-204ENST00000505804 SFT2D2O95562 160 aa0.3□□□□□ -2.36
TOPBP1-204ENST00000505804 ASIPP42127 132 aa0.3□□□□□ -2.36
TOPBP1-204ENST00000505804 S100A10P60903 97 aa0.3□□□□□ -2.36
TOPBP1-204ENST00000505804 KRTDAPP60985 99 aa0.3□□□□□ -2.36
TOPBP1-204ENST00000505804 TMEM170BQ5T4T1 132 aa0.3□□□□□ -2.36
TOPBP1-204ENST00000505804 SSBP3-AS1Q7Z2R9 100 aa0.3□□□□□ -2.36
TOPBP1-204ENST00000505804 MANBALQ9NQG1 85 aa0.3□□□□□ -2.36
TOPBP1-204ENST00000505804 PRO1854Q9UHT4 67 aa0.3□□□□□ -2.36
TOPBP1-204ENST00000505804 LYSTQ99698 3801 aa0.3□□□□□ -2.36
TOPBP1-204ENST00000505804 KIAA0586Q9BVV6 1533 aa0.29□□□□□ -2.36
TOPBP1-204ENST00000505804 TULP4Q9NRJ4 1543 aa0.29□□□□□ -2.36
TOPBP1-204ENST00000505804 ARHGEF12Q9NZN5 1544 aa0.29□□□□□ -2.36
TOPBP1-204ENST00000505804 HUWE1Q7Z6Z7 4374 aaKnown RBP0.29□□□□□ -2.36
TOPBP1-204ENST00000505804 PAPPAQ13219 1627 aa0.29□□□□□ -2.36
TOPBP1-204ENST00000505804 DNAH11Q96DT5 4516 aa0.29□□□□□ -2.36
TOPBP1-204ENST00000505804 hADV29S1A0JD25 119 aa0.29□□□□□ -2.36
TOPBP1-204ENST00000505804 MGPP08493 103 aa0.29□□□□□ -2.36
TOPBP1-204ENST00000505804 COX6CP09669 75 aa0.29□□□□□ -2.36
TOPBP1-204ENST00000505804 HAMPP81172 84 aa0.29□□□□□ -2.36
TOPBP1-204ENST00000505804 FAM223AQ8IWN6 122 aa0.29□□□□□ -2.36
TOPBP1-204ENST00000505804 ACBD7Q8N6N7 88 aa0.29□□□□□ -2.36
TOPBP1-204ENST00000505804 NXT2Q9NPJ8 142 aaKnown RBP0.29□□□□□ -2.36
TOPBP1-204ENST00000505804 ARL2-SNX15V9GYD0 113 aa0.29□□□□□ -2.36
TOPBP1-204ENST00000505804 MON2Q7Z3U7 1717 aa0.29□□□□□ -2.36
TOPBP1-204ENST00000505804 XRN1Q8IZH2 1706 aaKnown RBP0.29□□□□□ -2.36
TOPBP1-204ENST00000505804 MARF1Q9Y4F3 1742 aaKnown RBP0.29□□□□□ -2.36
TOPBP1-204ENST00000505804 CCNB3Q8WWL7 1395 aa0.29□□□□□ -2.36
TOPBP1-204ENST00000505804 RGPD4Q7Z3J3 1758 aa0.29□□□□□ -2.36
TOPBP1-204ENST00000505804 TNCP24821 2201 aa0.29□□□□□ -2.36
TOPBP1-204ENST00000505804 ADGRL2O95490 1459 aa0.29□□□□□ -2.36
TOPBP1-204ENST00000505804 KNL1Q8NG31 2342 aa0.29□□□□□ -2.36
TOPBP1-204ENST00000505804 EPRSP07814 1512 aaKnown RBP0.28□□□□□ -2.36
TOPBP1-204ENST00000505804 DNAH6Q9C0G6 4158 aa0.28□□□□□ -2.36
TOPBP1-204ENST00000505804 TTC37Q6PGP7 1564 aa0.28□□□□□ -2.36
TOPBP1-204ENST00000505804 SHPRHQ149N8 1683 aa0.28□□□□□ -2.36
TOPBP1-204ENST00000505804 PAPPA2Q9BXP8 1791 aa0.28□□□□□ -2.36
TOPBP1-204ENST00000505804 S100A8P05109 93 aa0.28□□□□□ -2.36
TOPBP1-204ENST00000505804 IGLC1P0CG04 106 aa0.28□□□□□ -2.36
TOPBP1-204ENST00000505804 NCMAPQ5T1S8 102 aa0.28□□□□□ -2.36
TOPBP1-204ENST00000505804 Q6JHZ5 121 aa0.28□□□□□ -2.36
TOPBP1-204ENST00000505804 FAIMQ9NVQ4 179 aa0.28□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms