RNA–Protein interactions for RNA: ENST00000505020.1

CDH9-202, Transcript of cadherin 9, humanhuman

TSL 2

Gene CDH9, Length 1,836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-202ENST00000505020 H3BRN7 92 aa3.91□□□□□ -1.78
CDH9-202ENST00000505020 SPINK4O60575 86 aa3.91□□□□□ -1.78
CDH9-202ENST00000505020 IGLV6-57P01721 117 aa3.91□□□□□ -1.78
CDH9-202ENST00000505020 LINC00315P59091 139 aa3.91□□□□□ -1.78
CDH9-202ENST00000505020 IGIPA6NJ69 53 aa3.91□□□□□ -1.78
CDH9-202ENST00000505020 I3L3M4 83 aa3.91□□□□□ -1.78
CDH9-202ENST00000505020 COX6B1P14854 86 aa3.91□□□□□ -1.78
CDH9-202ENST00000505020 BAHCC1Q9P281 2608 aa3.9□□□□□ -1.78
CDH9-202ENST00000505020 ARL14EPLP0DKL9 152 aa3.9□□□□□ -1.79
CDH9-202ENST00000505020 SPINK14Q6IE38 97 aa3.9□□□□□ -1.79
CDH9-202ENST00000505020 Q8N9L7 120 aa3.9□□□□□ -1.79
CDH9-202ENST00000505020 TIMM8BQ9Y5J9 83 aaPredicted RBP3.9□□□□□ -1.79
CDH9-202ENST00000505020 CHD8Q9HCK8 2581 aa3.89□□□□□ -1.79
CDH9-202ENST00000505020 ACYP2P14621 99 aa3.89□□□□□ -1.79
CDH9-202ENST00000505020 ADAMTS9Q9P2N4 1935 aa3.89□□□□□ -1.79
CDH9-202ENST00000505020 NDUFA4O00483 81 aa3.88□□□□□ -1.79
CDH9-202ENST00000505020 LRRC37A2A6NM11 1700 aa3.88□□□□□ -1.79
CDH9-202ENST00000505020 LINC01546A6NGU7 62 aa3.87□□□□□ -1.79
CDH9-202ENST00000505020 INE1O15225 51 aa3.87□□□□□ -1.79
CDH9-202ENST00000505020 COA5Q86WW8 74 aa3.87□□□□□ -1.79
CDH9-202ENST00000505020 COL4A2P08572 1712 aa3.87□□□□□ -1.79
CDH9-202ENST00000505020 SPTBN4Q9H254 2564 aa3.86□□□□□ -1.79
CDH9-202ENST00000505020 KMT2BQ9UMN6 2715 aaPredicted RBP3.86□□□□□ -1.79
CDH9-202ENST00000505020 IGKV2D-24A0A075B6R9 120 aa3.86□□□□□ -1.79
CDH9-202ENST00000505020 PTPRZ1P23471 2315 aaPredicted RBP3.86□□□□□ -1.79
CDH9-202ENST00000505020 EPG5Q9HCE0 2579 aa3.86□□□□□ -1.79
CDH9-202ENST00000505020 ALPK2Q86TB3 2170 aa3.86□□□□□ -1.79
CDH9-202ENST00000505020 A0A1B0GU69 56 aa3.86□□□□□ -1.79
CDH9-202ENST00000505020 ATRXP46100 2492 aa3.85□□□□□ -1.79
CDH9-202ENST00000505020 IGLV4-60A0A075B6I1 120 aa3.85□□□□□ -1.79
CDH9-202ENST00000505020 FREM1Q5H8C1 2179 aa3.85□□□□□ -1.79
CDH9-202ENST00000505020 CDH23Q9H251 3354 aa3.83□□□□□ -1.8
CDH9-202ENST00000505020 PLXNB2O15031 1838 aa3.83□□□□□ -1.8
CDH9-202ENST00000505020 A0A0G2JMZ2 1700 aa3.83□□□□□ -1.8
CDH9-202ENST00000505020 TPRP12270 2363 aaKnown RBP3.83□□□□□ -1.8
CDH9-202ENST00000505020 MED13LQ71F56 2210 aa3.82□□□□□ -1.8
CDH9-202ENST00000505020 M0R2N4 97 aa3.82□□□□□ -1.8
CDH9-202ENST00000505020 FXYD6P3P58550 94 aa3.82□□□□□ -1.8
CDH9-202ENST00000505020 COX7BP24311 80 aa3.81□□□□□ -1.8
CDH9-202ENST00000505020 FAM186AA6NE01 2351 aa3.81□□□□□ -1.8
CDH9-202ENST00000505020 CACNA1HO95180 2353 aa3.81□□□□□ -1.8
CDH9-202ENST00000505020 PRRC2AP48634 2157 aaKnown RBP3.81□□□□□ -1.8
CDH9-202ENST00000505020 RIF1Q5UIP0 2472 aaKnown RBP3.81□□□□□ -1.8
CDH9-202ENST00000505020 RTTNQ86VV8 2226 aa3.81□□□□□ -1.8
CDH9-202ENST00000505020 NCOR2Q9Y618 2525 aa3.8□□□□□ -1.8
CDH9-202ENST00000505020 ACACBO00763 2458 aa3.8□□□□□ -1.8
CDH9-202ENST00000505020 CFAP54Q96N23 3096 aa3.8□□□□□ -1.8
CDH9-202ENST00000505020 CHD6Q8TD26 2715 aa3.8□□□□□ -1.8
CDH9-202ENST00000505020 DEFB114Q30KQ6 69 aa3.79□□□□□ -1.8
CDH9-202ENST00000505020 HMCN1Q96RW7 5635 aa3.79□□□□□ -1.8
CDH9-202ENST00000505020 TECTAO75443 2155 aa3.79□□□□□ -1.8
CDH9-202ENST00000505020 SHANK1Q9Y566 2161 aa3.79□□□□□ -1.8
CDH9-202ENST00000505020 KRTAP10-8P60410 259 aa3.79□□□□□ -1.8
CDH9-202ENST00000505020 FASNP49327 2511 aaKnown RBP3.78□□□□□ -1.8
CDH9-202ENST00000505020 GPR179Q6PRD1 2367 aa3.78□□□□□ -1.8
CDH9-202ENST00000505020 GVINP1Q7Z2Y8 2422 aa3.78□□□□□ -1.8
CDH9-202ENST00000505020 HAMPP81172 84 aa3.78□□□□□ -1.8
CDH9-202ENST00000505020 CCL19Q99731 98 aa3.78□□□□□ -1.8
CDH9-202ENST00000505020 CHD9Q3L8U1 2897 aa3.78□□□□□ -1.8
CDH9-202ENST00000505020 TNCP24821 2201 aa3.78□□□□□ -1.81
CDH9-202ENST00000505020 USP34Q70CQ2 3546 aa3.77□□□□□ -1.81
CDH9-202ENST00000505020 NDUFA3O95167 84 aa3.77□□□□□ -1.81
CDH9-202ENST00000505020 PRB2P02812 416 aaPredicted RBP3.77□□□□□ -1.81
CDH9-202ENST00000505020 KRTAP13-2Q52LG2 175 aa3.77□□□□□ -1.81
CDH9-202ENST00000505020 KCNQ1DNQ9H478 68 aa3.77□□□□□ -1.81
CDH9-202ENST00000505020 FAM208BQ5VWN6 2430 aa3.77□□□□□ -1.81
CDH9-202ENST00000505020 WDFY4Q6ZS81 3184 aa3.76□□□□□ -1.81
CDH9-202ENST00000505020 Q6ZQY7 126 aa3.76□□□□□ -1.81
CDH9-202ENST00000505020 C5orf42Q9H799 3197 aa3.76□□□□□ -1.81
CDH9-202ENST00000505020 ZFHX4Q86UP3 3567 aa3.75□□□□□ -1.81
CDH9-202ENST00000505020 REV3LO60673 3130 aa3.75□□□□□ -1.81
CDH9-202ENST00000505020 UNC79Q9P2D8 2635 aa3.75□□□□□ -1.81
CDH9-202ENST00000505020 ETDCA0A1B0GVM5 59 aa3.75□□□□□ -1.81
CDH9-202ENST00000505020 F5P12259 2224 aa3.75□□□□□ -1.81
CDH9-202ENST00000505020 FN1P02751 2386 aaKnown RBP3.75□□□□□ -1.81
CDH9-202ENST00000505020 MAP1BP46821 2468 aaKnown RBP3.75□□□□□ -1.81
CDH9-202ENST00000505020 ANKRD11Q6UB99 2663 aaPredicted RBP3.75□□□□□ -1.81
CDH9-202ENST00000505020 Q6ZRN7 208 aaPredicted RBP3.74□□□□□ -1.81
CDH9-202ENST00000505020 CACNA1CQ13936 2221 aa3.74□□□□□ -1.81
CDH9-202ENST00000505020 USP24Q9UPU5 2620 aa3.74□□□□□ -1.81
CDH9-202ENST00000505020 XIRP2A4UGR9 3374 aa3.73□□□□□ -1.81
CDH9-202ENST00000505020 DNAH12Q6ZR08 3092 aa3.73□□□□□ -1.81
CDH9-202ENST00000505020 NCR3O14931 201 aa3.73□□□□□ -1.81
CDH9-202ENST00000505020 CHD7Q9P2D1 2997 aa3.73□□□□□ -1.81
CDH9-202ENST00000505020 DCHS1Q96JQ0 3298 aa3.73□□□□□ -1.81
CDH9-202ENST00000505020 SETXQ7Z333 2677 aaKnown RBP3.73□□□□□ -1.81
CDH9-202ENST00000505020 EP300Q09472 2414 aaPredicted RBP3.72□□□□□ -1.81
CDH9-202ENST00000505020 LOC730098B7Z3J9 87 aa3.72□□□□□ -1.81
CDH9-202ENST00000505020 COL4A4P53420 1690 aaPredicted RBP3.72□□□□□ -1.81
CDH9-202ENST00000505020 TRANK1O15050 2925 aa3.72□□□□□ -1.81
CDH9-202ENST00000505020 G3V318 75 aa3.72□□□□□ -1.81
CDH9-202ENST00000505020 SSBP3-AS1Q7Z2R9 100 aa3.72□□□□□ -1.81
CDH9-202ENST00000505020 FLNBO75369 2602 aaKnown RBP3.72□□□□□ -1.81
CDH9-202ENST00000505020 CEP250Q9BV73 2442 aa3.71□□□□□ -1.81
CDH9-202ENST00000505020 IGKV2-28A0A075B6P5 120 aa3.71□□□□□ -1.82
CDH9-202ENST00000505020 IGKV2D-28P01615 120 aa3.71□□□□□ -1.82
CDH9-202ENST00000505020 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.71□□□□□ -1.82
CDH9-202ENST00000505020 ABCA1O95477 2261 aa3.71□□□□□ -1.82
CDH9-202ENST00000505020 ZNF292O60281 2723 aa3.7□□□□□ -1.82
CDH9-202ENST00000505020 H0YGX0 51 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms