RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 F5H768 121 aa2.85□□□□□ -1.95
RFC1-208ENST00000504849 INSP01308 110 aa2.85□□□□□ -1.95
RFC1-208ENST00000504849 IGHV3-53P01767 116 aa2.85□□□□□ -1.95
RFC1-208ENST00000504849 CRYGAP11844 174 aa2.85□□□□□ -1.95
RFC1-208ENST00000504849 TMEM258P61165 79 aa2.85□□□□□ -1.95
RFC1-208ENST00000504849 RPS28P62857 69 aaKnown RBP2.85□□□□□ -1.95
RFC1-208ENST00000504849 DAZ2Q13117 558 aaKnown RBP2.85□□□□□ -1.95
RFC1-208ENST00000504849 ATP5EP2Q5VTU8 51 aa2.85□□□□□ -1.95
RFC1-208ENST00000504849 Q6JHZ5 121 aa2.85□□□□□ -1.95
RFC1-208ENST00000504849 FAM19A3Q7Z5A8 133 aa2.85□□□□□ -1.95
RFC1-208ENST00000504849 DAZ4Q86SG3 579 aaKnown RBP2.85□□□□□ -1.95
RFC1-208ENST00000504849 C5orf38Q86SI9 138 aa2.85□□□□□ -1.95
RFC1-208ENST00000504849 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.85□□□□□ -1.95
RFC1-208ENST00000504849 DAZ3Q9NR90 486 aaKnown RBP2.85□□□□□ -1.95
RFC1-208ENST00000504849 CADP27708 2225 aa2.85□□□□□ -1.95
RFC1-208ENST00000504849 PLCE1Q9P212 2302 aa2.84□□□□□ -1.95
RFC1-208ENST00000504849 IGHV3-73A0A0B4J1V6 119 aa2.84□□□□□ -1.95
RFC1-208ENST00000504849 TRBV10-1A0A0K0K1A3 114 aa2.84□□□□□ -1.95
RFC1-208ENST00000504849 UBE2L6O14933 153 aa2.84□□□□□ -1.95
RFC1-208ENST00000504849 RPL28P46779 137 aaKnown RBP2.84□□□□□ -1.95
RFC1-208ENST00000504849 CDKN2A-AS1Q9UH64 79 aa2.84□□□□□ -1.95
RFC1-208ENST00000504849 TGP01266 2768 aa2.84□□□□□ -1.95
RFC1-208ENST00000504849 RP1L1Q8IWN7 2480 aaPredicted RBP2.84□□□□□ -1.96
RFC1-208ENST00000504849 A8MTW9 85 aa2.83□□□□□ -1.96
RFC1-208ENST00000504849 NDUFS5O43920 106 aa2.83□□□□□ -1.96
RFC1-208ENST00000504849 LINC00694P0DN24 101 aa2.83□□□□□ -1.96
RFC1-208ENST00000504849 HTN1P15515 57 aa2.83□□□□□ -1.96
RFC1-208ENST00000504849 PSMB8P28062 276 aa2.83□□□□□ -1.96
RFC1-208ENST00000504849 HIST1H4AP62805 103 aaKnown RBP2.83□□□□□ -1.96
RFC1-208ENST00000504849 RNASE13Q5GAN3 156 aaKnown RBP2.83□□□□□ -1.96
RFC1-208ENST00000504849 CEMP1Q6PRD7 247 aaPredicted RBP2.83□□□□□ -1.96
RFC1-208ENST00000504849 BRD3OSQ6XYD6 125 aa2.83□□□□□ -1.96
RFC1-208ENST00000504849 FAM19A5Q7Z5A7 132 aaPredicted RBP2.83□□□□□ -1.96
RFC1-208ENST00000504849 SERP2Q8N6R1 65 aa2.83□□□□□ -1.96
RFC1-208ENST00000504849 DYNLRB2Q8TF09 96 aa2.83□□□□□ -1.96
RFC1-208ENST00000504849 FAM104AQ969W3 186 aa2.83□□□□□ -1.96
RFC1-208ENST00000504849 TLN2Q9Y4G6 2542 aa2.82□□□□□ -1.96
RFC1-208ENST00000504849 SMIM26A0A096LP01 95 aa2.82□□□□□ -1.96
RFC1-208ENST00000504849 hADV29S1A0JD25 119 aa2.82□□□□□ -1.96
RFC1-208ENST00000504849 PLAC8L1A1L4L8 177 aa2.82□□□□□ -1.96
RFC1-208ENST00000504849 SMIM9A6NGZ8 99 aa2.82□□□□□ -1.96
RFC1-208ENST00000504849 KNCNA6PVL3 124 aa2.82□□□□□ -1.96
RFC1-208ENST00000504849 NDUFC2-KCTD14E9PQ53 114 aa2.82□□□□□ -1.96
RFC1-208ENST00000504849 JMJD7-PLA2G4BH0Y9G9 81 aa2.82□□□□□ -1.96
RFC1-208ENST00000504849 PLXNB1O43157 2135 aa2.82□□□□□ -1.96
RFC1-208ENST00000504849 MSMBP08118 114 aa2.82□□□□□ -1.96
RFC1-208ENST00000504849 DEFB131AP59861 70 aa2.82□□□□□ -1.96
RFC1-208ENST00000504849 BLCAPP62952 87 aa2.82□□□□□ -1.96
RFC1-208ENST00000504849 SMCR5Q8TEV8 140 aa2.82□□□□□ -1.96
RFC1-208ENST00000504849 COX7B2Q8TF08 81 aa2.82□□□□□ -1.96
RFC1-208ENST00000504849 ZNF625Q96I27 306 aaPredicted RBP2.82□□□□□ -1.96
RFC1-208ENST00000504849 CCL19Q99731 98 aa2.82□□□□□ -1.96
RFC1-208ENST00000504849 TMEM243Q9BU79 118 aa2.82□□□□□ -1.96
RFC1-208ENST00000504849 SND1-IT1Q9HBX3 110 aa2.82□□□□□ -1.96
RFC1-208ENST00000504849 ORMDL1Q9P0S3 153 aa2.82□□□□□ -1.96
RFC1-208ENST00000504849 PRO0628Q9UI54 55 aa2.82□□□□□ -1.96
RFC1-208ENST00000504849 TACC2O95359 2948 aa2.82□□□□□ -1.96
RFC1-208ENST00000504849 AGRNO00468 2067 aa2.81□□□□□ -1.96
RFC1-208ENST00000504849 ZGRF1Q86YA3 2104 aa2.81□□□□□ -1.96
RFC1-208ENST00000504849 TRAV13-1A0A0B4J241 112 aa2.81□□□□□ -1.96
RFC1-208ENST00000504849 IBA57-AS1B1ANH7 110 aa2.81□□□□□ -1.96
RFC1-208ENST00000504849 B4DSR2 109 aa2.81□□□□□ -1.96
RFC1-208ENST00000504849 H3BQ85 93 aa2.81□□□□□ -1.96
RFC1-208ENST00000504849 NDUFC2O95298 119 aa2.81□□□□□ -1.96
RFC1-208ENST00000504849 CMC4P56277 68 aaPredicted RBP2.81□□□□□ -1.96
RFC1-208ENST00000504849 LINC00158P58513 81 aa2.81□□□□□ -1.96
RFC1-208ENST00000504849 C6orf99Q4VX62 202 aa2.81□□□□□ -1.96
RFC1-208ENST00000504849 TMEM86BQ8N661 226 aa2.81□□□□□ -1.96
RFC1-208ENST00000504849 C3orf56Q8N813 242 aa2.81□□□□□ -1.96
RFC1-208ENST00000504849 C10orf105Q8TEF2 133 aa2.81□□□□□ -1.96
RFC1-208ENST00000504849 OBSCN-AS1Q96MR7 158 aa2.81□□□□□ -1.96
RFC1-208ENST00000504849 KLK5Q9Y337 293 aaPredicted RBP2.81□□□□□ -1.96
RFC1-208ENST00000504849 DCHS2Q6V1P9 2916 aa2.8□□□□□ -1.96
RFC1-208ENST00000504849 TRGV1A0A0A0MS02 117 aa2.8□□□□□ -1.96
RFC1-208ENST00000504849 IGHV6-1A0A0B4J1U7 121 aa2.8□□□□□ -1.96
RFC1-208ENST00000504849 TRBV10-3A0A0K0K1G6 114 aa2.8□□□□□ -1.96
RFC1-208ENST00000504849 BCE1O60756 84 aa2.8□□□□□ -1.96
RFC1-208ENST00000504849 GIG44P09565 113 aaPredicted RBP2.8□□□□□ -1.96
RFC1-208ENST00000504849 COX6A2Q02221 97 aa2.8□□□□□ -1.96
RFC1-208ENST00000504849 RBMY1FQ15415 496 aaKnown RBP2.8□□□□□ -1.96
RFC1-208ENST00000504849 C4orf26Q17RF5 130 aa2.8□□□□□ -1.96
RFC1-208ENST00000504849 SOSTDC1Q6X4U4 206 aa2.8□□□□□ -1.96
RFC1-208ENST00000504849 Q8N2B8 174 aa2.8□□□□□ -1.96
RFC1-208ENST00000504849 MIR7-3HGQ8N6C7 128 aa2.8□□□□□ -1.96
RFC1-208ENST00000504849 C16orf74Q96GX8 76 aa2.8□□□□□ -1.96
RFC1-208ENST00000504849 UBL5Q9BZL1 73 aa2.8□□□□□ -1.96
RFC1-208ENST00000504849 C14orf132Q9NPU4 83 aa2.8□□□□□ -1.96
RFC1-208ENST00000504849 CDC42SE2Q9NRR3 84 aa2.8□□□□□ -1.96
RFC1-208ENST00000504849 ARFGEF3Q5TH69 2177 aa2.8□□□□□ -1.96
RFC1-208ENST00000504849 RYR3Q15413 4870 aa2.79□□□□□ -1.96
RFC1-208ENST00000504849 CUBNO60494 3623 aa2.79□□□□□ -1.96
RFC1-208ENST00000504849 ACANP16112 2415 aa2.79□□□□□ -1.96
RFC1-208ENST00000504849 IGKV3D-7A0A0C4DH55 119 aa2.79□□□□□ -1.96
RFC1-208ENST00000504849 TMEM256-PLSCR3K7ERE1 68 aa2.79□□□□□ -1.96
RFC1-208ENST00000504849 LECT2O14960 151 aa2.79□□□□□ -1.96
RFC1-208ENST00000504849 CCKP06307 115 aa2.79□□□□□ -1.96
RFC1-208ENST00000504849 SMIM11BQ8TCY0 68 aa2.79□□□□□ -1.96
RFC1-208ENST00000504849 TOMM7Q9P0U1 55 aa2.79□□□□□ -1.96
RFC1-208ENST00000504849 ABCA1O95477 2261 aa2.79□□□□□ -1.96
RFC1-208ENST00000504849 IGLV1-50A0A075B6I6 118 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms