RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 ZNF815PA8K554 130 aa1.17□□□□□ -2.22
CLK1-214ENST00000496205 LY6G6CO95867 125 aa1.17□□□□□ -2.22
CLK1-214ENST00000496205 SFTA3P0C7M3 94 aa1.17□□□□□ -2.22
CLK1-214ENST00000496205 SPINT3P49223 89 aa1.17□□□□□ -2.22
CLK1-214ENST00000496205 ZNF137PP52743 207 aa1.17□□□□□ -2.22
CLK1-214ENST00000496205 Q6ZRX8 168 aa1.17□□□□□ -2.22
CLK1-214ENST00000496205 PROK2Q9HC23 129 aa1.17□□□□□ -2.22
CLK1-214ENST00000496205 LINC00846Q9NV44 126 aa1.17□□□□□ -2.22
CLK1-214ENST00000496205 HILPDAQ9Y5L2 63 aa1.17□□□□□ -2.22
CLK1-214ENST00000496205 RP1L1Q8IWN7 2480 aaPredicted RBP1.17□□□□□ -2.22
CLK1-214ENST00000496205 USP34Q70CQ2 3546 aa1.17□□□□□ -2.22
CLK1-214ENST00000496205 LRRC37AA6NMS7 1700 aa1.17□□□□□ -2.22
CLK1-214ENST00000496205 TJP1Q07157 1748 aa1.17□□□□□ -2.22
CLK1-214ENST00000496205 NCOA6Q14686 2063 aaPredicted RBP1.17□□□□□ -2.22
CLK1-214ENST00000496205 RANBP2P49792 3224 aaKnown RBP1.17□□□□□ -2.22
CLK1-214ENST00000496205 CDH23Q9H251 3354 aa1.16□□□□□ -2.22
CLK1-214ENST00000496205 DOT1LQ8TEK3 1739 aa1.16□□□□□ -2.22
CLK1-214ENST00000496205 A0A087WXM4 84 aa1.16□□□□□ -2.22
CLK1-214ENST00000496205 KANTRA0A1W2PQU2 76 aa1.16□□□□□ -2.22
CLK1-214ENST00000496205 FAM223BA6NKX1 122 aa1.16□□□□□ -2.22
CLK1-214ENST00000496205 F8WEM9 126 aa1.16□□□□□ -2.22
CLK1-214ENST00000496205 SMIM13P0DJ93 91 aa1.16□□□□□ -2.22
CLK1-214ENST00000496205 GCHFRP30047 84 aa1.16□□□□□ -2.22
CLK1-214ENST00000496205 SPRR4Q96PI1 79 aa1.16□□□□□ -2.22
CLK1-214ENST00000496205 PRR15LQ9BU68 103 aa1.16□□□□□ -2.22
CLK1-214ENST00000496205 TRIOO75962 3097 aa1.16□□□□□ -2.22
CLK1-214ENST00000496205 DMDP11532 3685 aa1.16□□□□□ -2.22
CLK1-214ENST00000496205 REV3LO60673 3130 aa1.15□□□□□ -2.22
CLK1-214ENST00000496205 SZT2Q5T011 3432 aa1.15□□□□□ -2.23
CLK1-214ENST00000496205 IQCF6A8MYZ5 107 aa1.15□□□□□ -2.23
CLK1-214ENST00000496205 C10orf142B7Z368 130 aa1.15□□□□□ -2.23
CLK1-214ENST00000496205 KRTAP10-4P60372 401 aaPredicted RBP1.15□□□□□ -2.23
CLK1-214ENST00000496205 SNRPFP62306 86 aaKnown RBP1.15□□□□□ -2.23
CLK1-214ENST00000496205 LINC01600Q96MT4 127 aa1.15□□□□□ -2.23
CLK1-214ENST00000496205 PRUNE2Q8WUY3 3088 aa1.15□□□□□ -2.23
CLK1-214ENST00000496205 NCOR1O75376 2440 aa1.15□□□□□ -2.23
CLK1-214ENST00000496205 CNTRLQ7Z7A1 2325 aa1.15□□□□□ -2.23
CLK1-214ENST00000496205 ZNF236Q9UL36 1845 aa1.15□□□□□ -2.23
CLK1-214ENST00000496205 XIRP2A4UGR9 3374 aa1.14□□□□□ -2.23
CLK1-214ENST00000496205 TNRC18O15417 2968 aaPredicted RBP1.14□□□□□ -2.23
CLK1-214ENST00000496205 PAPPA2Q9BXP8 1791 aa1.14□□□□□ -2.23
CLK1-214ENST00000496205 A0A0C4DFX4 3053 aa1.14□□□□□ -2.23
CLK1-214ENST00000496205 A0A087WWC5 75 aa1.14□□□□□ -2.23
CLK1-214ENST00000496205 ACYP1P07311 99 aa1.14□□□□□ -2.23
CLK1-214ENST00000496205 SPINK9Q5DT21 86 aa1.14□□□□□ -2.23
CLK1-214ENST00000496205 C6orf201Q7Z4U5 140 aa1.14□□□□□ -2.23
CLK1-214ENST00000496205 FDCSPQ8NFU4 85 aa1.14□□□□□ -2.23
CLK1-214ENST00000496205 TMEM263Q8WUH6 116 aaKnown RBP1.14□□□□□ -2.23
CLK1-214ENST00000496205 PSENENQ9NZ42 101 aa1.14□□□□□ -2.23
CLK1-214ENST00000496205 TIAM2Q8IVF5 1701 aa1.14□□□□□ -2.23
CLK1-214ENST00000496205 VCANP13611 3396 aa1.14□□□□□ -2.23
CLK1-214ENST00000496205 KCPQ6ZWJ8 1503 aa1.14□□□□□ -2.23
CLK1-214ENST00000496205 COL6A3P12111 3177 aa1.14□□□□□ -2.23
CLK1-214ENST00000496205 EYSQ5T1H1 3165 aa1.14□□□□□ -2.23
CLK1-214ENST00000496205 MED13LQ71F56 2210 aa1.13□□□□□ -2.23
CLK1-214ENST00000496205 SSC5DA1L4H1 1573 aa1.13□□□□□ -2.23
CLK1-214ENST00000496205 CHD7Q9P2D1 2997 aa1.13□□□□□ -2.23
CLK1-214ENST00000496205 DDX60LQ5H9U9 1706 aaKnown RBP1.13□□□□□ -2.23
CLK1-214ENST00000496205 LINC00643Q86TS7 51 aa1.13□□□□□ -2.23
CLK1-214ENST00000496205 DNAH14Q0VDD8 3507 aa1.12□□□□□ -2.23
CLK1-214ENST00000496205 MYO15AQ9UKN7 3530 aa1.12□□□□□ -2.23
CLK1-214ENST00000496205 UNC80Q8N2C7 3258 aa1.12□□□□□ -2.23
CLK1-214ENST00000496205 H3BVH4 76 aa1.12□□□□□ -2.23
CLK1-214ENST00000496205 HMGN2P05204 90 aaKnown RBP1.12□□□□□ -2.23
CLK1-214ENST00000496205 ARMS2P0C7Q2 107 aa1.12□□□□□ -2.23
CLK1-214ENST00000496205 FAM103A1Q9BTL3 118 aaKnown RBP1.12□□□□□ -2.23
CLK1-214ENST00000496205 LINC00472Q9H8W2 130 aa1.12□□□□□ -2.23
CLK1-214ENST00000496205 TENM1Q9UKZ4 2725 aa1.12□□□□□ -2.23
CLK1-214ENST00000496205 WDR87Q6ZQQ6 2873 aa1.12□□□□□ -2.23
CLK1-214ENST00000496205 VPS13AQ96RL7 3174 aa1.12□□□□□ -2.23
CLK1-214ENST00000496205 WDFY3Q8IZQ1 3526 aa1.11□□□□□ -2.23
CLK1-214ENST00000496205 ANKRD36A6QL64 1941 aa1.11□□□□□ -2.23
CLK1-214ENST00000496205 C5orf42Q9H799 3197 aa1.11□□□□□ -2.23
CLK1-214ENST00000496205 LAMA1P25391 3075 aa1.11□□□□□ -2.23
CLK1-214ENST00000496205 A0A087WVE0 104 aa1.11□□□□□ -2.23
CLK1-214ENST00000496205 MYMXA0A1B0GTQ4 84 aa1.11□□□□□ -2.23
CLK1-214ENST00000496205 G3V318 75 aa1.11□□□□□ -2.23
CLK1-214ENST00000496205 M0R3E3 92 aa1.11□□□□□ -2.23
CLK1-214ENST00000496205 LEPROTL1O95214 131 aa1.11□□□□□ -2.23
CLK1-214ENST00000496205 C3orf79P0CE67 100 aa1.11□□□□□ -2.23
CLK1-214ENST00000496205 COX8AP10176 69 aa1.11□□□□□ -2.23
CLK1-214ENST00000496205 S100A3P33764 101 aa1.11□□□□□ -2.23
CLK1-214ENST00000496205 GNG13Q9P2W3 67 aa1.11□□□□□ -2.23
CLK1-214ENST00000496205 CHD9Q3L8U1 2897 aa1.11□□□□□ -2.23
CLK1-214ENST00000496205 MYO7BQ6PIF6 2116 aa1.1□□□□□ -2.23
CLK1-214ENST00000496205 TNRC6CQ9HCJ0 1690 aaKnown RBP1.1□□□□□ -2.23
CLK1-214ENST00000496205 PDE4DIPQ5VU43 2346 aa1.1□□□□□ -2.23
CLK1-214ENST00000496205 FRYLO94915 3013 aa1.1□□□□□ -2.23
CLK1-214ENST00000496205 FXYD6-FXYD2A0A087WZ82 144 aa1.1□□□□□ -2.23
CLK1-214ENST00000496205 CEBPZOSA8MTT3 80 aa1.1□□□□□ -2.23
CLK1-214ENST00000496205 PLGLAQ15195 96 aa1.1□□□□□ -2.23
CLK1-214ENST00000496205 FXYD6Q9H0Q3 95 aa1.1□□□□□ -2.23
CLK1-214ENST00000496205 CEP290O15078 2479 aa1.1□□□□□ -2.23
CLK1-214ENST00000496205 BSNQ9UPA5 3926 aa1.09□□□□□ -2.23
CLK1-214ENST00000496205 ABCA1O95477 2261 aa1.09□□□□□ -2.23
CLK1-214ENST00000496205 Q6JHZ5 121 aa1.09□□□□□ -2.23
CLK1-214ENST00000496205 SMIM5Q71RC9 77 aa1.09□□□□□ -2.23
CLK1-214ENST00000496205 UBE2DNLQ8IWF7 75 aa1.09□□□□□ -2.23
CLK1-214ENST00000496205 TSC2P49815 1807 aa1.09□□□□□ -2.23
CLK1-214ENST00000496205 WDFY4Q6ZS81 3184 aa1.09□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms