RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 IGLC3P0DOY3 106 aa5.72□□□□□ -1.49
MSH5-218ENST00000494646 ZNF22P17026 224 aaPredicted RBP5.72□□□□□ -1.49
MSH5-218ENST00000494646 TP73-AS1Q9UF72 201 aa5.72□□□□□ -1.49
MSH5-218ENST00000494646 HBDP02042 147 aa5.71□□□□□ -1.5
MSH5-218ENST00000494646 BAGE3Q86Y29 109 aa5.71□□□□□ -1.5
MSH5-218ENST00000494646 NKAPP1Q8N9T2 125 aa5.71□□□□□ -1.5
MSH5-218ENST00000494646 ZNF625Q96I27 306 aaPredicted RBP5.71□□□□□ -1.5
MSH5-218ENST00000494646 MUC2Q02817 5179 aa5.7□□□□□ -1.5
MSH5-218ENST00000494646 IGKV2-28A0A075B6P5 120 aa5.7□□□□□ -1.5
MSH5-218ENST00000494646 IGLV5-39A0A0G2JS06 123 aa5.7□□□□□ -1.5
MSH5-218ENST00000494646 TSPAN13O95857 204 aa5.7□□□□□ -1.5
MSH5-218ENST00000494646 IGKV2D-28P01615 120 aa5.7□□□□□ -1.5
MSH5-218ENST00000494646 RPL13AP40429 203 aaKnown RBP5.7□□□□□ -1.5
MSH5-218ENST00000494646 RPL28P46779 137 aaKnown RBP5.7□□□□□ -1.5
MSH5-218ENST00000494646 ANAPC11Q9NYG5 84 aa5.7□□□□□ -1.5
MSH5-218ENST00000494646 C11orf86A6NJI1 115 aa5.69□□□□□ -1.5
MSH5-218ENST00000494646 PRR4Q16378 134 aa5.69□□□□□ -1.5
MSH5-218ENST00000494646 TMEM170BQ5T4T1 132 aa5.69□□□□□ -1.5
MSH5-218ENST00000494646 GAGE2AQ6NT46 116 aa5.69□□□□□ -1.5
MSH5-218ENST00000494646 ERG28Q9UKR5 140 aa5.69□□□□□ -1.5
MSH5-218ENST00000494646 MUC17Q685J3 4493 aa5.68□□□□□ -1.5
MSH5-218ENST00000494646 IGLV5-37A0A075B6J1 123 aa5.68□□□□□ -1.5
MSH5-218ENST00000494646 A0A087X002 238 aa5.68□□□□□ -1.5
MSH5-218ENST00000494646 SNAPINO95295 136 aa5.68□□□□□ -1.5
MSH5-218ENST00000494646 UBE2AP49459 152 aa5.68□□□□□ -1.5
MSH5-218ENST00000494646 UBE2V1Q13404 147 aa5.68□□□□□ -1.5
MSH5-218ENST00000494646 SVBPQ8N300 66 aa5.68□□□□□ -1.5
MSH5-218ENST00000494646 SND1-IT1Q9HBX3 110 aa5.68□□□□□ -1.5
MSH5-218ENST00000494646 NDUFA5Q16718 116 aa5.67□□□□□ -1.5
MSH5-218ENST00000494646 TMEM238C9JI98 176 aa5.66□□□□□ -1.5
MSH5-218ENST00000494646 CRYGAP11844 174 aa5.66□□□□□ -1.5
MSH5-218ENST00000494646 LINC00158P58513 81 aa5.66□□□□□ -1.5
MSH5-218ENST00000494646 RPL24P83731 157 aaKnown RBP5.66□□□□□ -1.5
MSH5-218ENST00000494646 Q8NDZ9 215 aa5.66□□□□□ -1.5
MSH5-218ENST00000494646 TYMSOSQ8TAI1 123 aa5.66□□□□□ -1.5
MSH5-218ENST00000494646 SEC61GP60059 68 aa5.65□□□□□ -1.5
MSH5-218ENST00000494646 PRLHP81277 87 aa5.65□□□□□ -1.5
MSH5-218ENST00000494646 COX17Q14061 63 aa5.65□□□□□ -1.5
MSH5-218ENST00000494646 FAM19A1Q7Z5A9 133 aa5.65□□□□□ -1.5
MSH5-218ENST00000494646 KRTAP13-1Q8IUC0 172 aa5.65□□□□□ -1.5
MSH5-218ENST00000494646 YPEL4Q96NS1 127 aa5.65□□□□□ -1.5
MSH5-218ENST00000494646 KRTAP13-2Q52LG2 175 aa5.64□□□□□ -1.51
MSH5-218ENST00000494646 FAM19A2Q8N3H0 131 aa5.64□□□□□ -1.51
MSH5-218ENST00000494646 IFI27L1Q96BM0 104 aa5.64□□□□□ -1.51
MSH5-218ENST00000494646 TMEM126AQ9H061 195 aa5.64□□□□□ -1.51
MSH5-218ENST00000494646 TMEM223A0PJW6 202 aa5.63□□□□□ -1.51
MSH5-218ENST00000494646 PCP4L1A6NKN8 68 aa5.63□□□□□ -1.51
MSH5-218ENST00000494646 SMIM13P0DJ93 91 aa5.63□□□□□ -1.51
MSH5-218ENST00000494646 HERV-K104P63124 156 aa5.63□□□□□ -1.51
MSH5-218ENST00000494646 CHCHD1Q96BP2 118 aaKnown RBP5.63□□□□□ -1.51
MSH5-218ENST00000494646 TRAV12-1A0A0B4J245 112 aa5.62□□□□□ -1.51
MSH5-218ENST00000494646 M0R378 163 aa5.62□□□□□ -1.51
MSH5-218ENST00000494646 SLC7A5P1Q8MH63 180 aa5.62□□□□□ -1.51
MSH5-218ENST00000494646 HSBP1O75506 76 aa5.61□□□□□ -1.51
MSH5-218ENST00000494646 MEIG1Q5JSS6 88 aa5.61□□□□□ -1.51
MSH5-218ENST00000494646 SFTA2Q6UW10 78 aa5.61□□□□□ -1.51
MSH5-218ENST00000494646 CBLN2Q8IUK8 224 aa5.61□□□□□ -1.51
MSH5-218ENST00000494646 IGKV2D-26A0A0A0MRZ7 120 aa5.6□□□□□ -1.51
MSH5-218ENST00000494646 TRGC2P03986 189 aa5.6□□□□□ -1.51
MSH5-218ENST00000494646 FAM229BQ4G0N7 80 aa5.6□□□□□ -1.51
MSH5-218ENST00000494646 PLEKHB2Q96CS7 222 aa5.6□□□□□ -1.51
MSH5-218ENST00000494646 RETNLBQ9BQ08 111 aa5.6□□□□□ -1.51
MSH5-218ENST00000494646 HIGD2AQ9BW72 106 aa5.6□□□□□ -1.51
MSH5-218ENST00000494646 BOD1L2Q8IYS8 172 aa5.59□□□□□ -1.51
MSH5-218ENST00000494646 MIR7-3HGQ8N6C7 128 aa5.59□□□□□ -1.51
MSH5-218ENST00000494646 KRTAP23-1A1A580 65 aa5.58□□□□□ -1.52
MSH5-218ENST00000494646 NCR3O14931 201 aa5.58□□□□□ -1.52
MSH5-218ENST00000494646 LEPROTL1O95214 131 aa5.58□□□□□ -1.52
MSH5-218ENST00000494646 FABP4P15090 132 aa5.58□□□□□ -1.52
MSH5-218ENST00000494646 C3orf22Q8N5N4 141 aa5.58□□□□□ -1.52
MSH5-218ENST00000494646 LINC00304Q8N9R0 145 aa5.58□□□□□ -1.52
MSH5-218ENST00000494646 NDUFA12Q9UI09 145 aa5.57□□□□□ -1.52
MSH5-218ENST00000494646 MYMXA0A1B0GTQ4 84 aa5.56□□□□□ -1.52
MSH5-218ENST00000494646 SERF1AO75920 110 aa5.56□□□□□ -1.52
MSH5-218ENST00000494646 LINC00310P59036 64 aa5.56□□□□□ -1.52
MSH5-218ENST00000494646 DAND5Q8N907 189 aa5.56□□□□□ -1.52
MSH5-218ENST00000494646 SMCR5Q8TEV8 140 aa5.56□□□□□ -1.52
MSH5-218ENST00000494646 PMCHL2Q9BQD1 86 aa5.56□□□□□ -1.52
MSH5-218ENST00000494646 FAT4Q6V0I7 4981 aa5.56□□□□□ -1.52
MSH5-218ENST00000494646 TSPEAR-AS2P59090 65 aa5.55□□□□□ -1.52
MSH5-218ENST00000494646 Q75L30 129 aa5.55□□□□□ -1.52
MSH5-218ENST00000494646 SPRR4Q96PI1 79 aa5.55□□□□□ -1.52
MSH5-218ENST00000494646 PPDPFQ9H3Y8 114 aa5.55□□□□□ -1.52
MSH5-218ENST00000494646 TRBV10-3A0A0K0K1G6 114 aa5.54□□□□□ -1.52
MSH5-218ENST00000494646 LINC00587B1AMM8 73 aa5.54□□□□□ -1.52
MSH5-218ENST00000494646 LEPROTO15243 131 aa5.54□□□□□ -1.52
MSH5-218ENST00000494646 MAP1LC3CQ9BXW4 147 aa5.54□□□□□ -1.52
MSH5-218ENST00000494646 ETDCA0A1B0GVM5 59 aa5.53□□□□□ -1.52
MSH5-218ENST00000494646 COLCA2A8K830 154 aa5.53□□□□□ -1.52
MSH5-218ENST00000494646 KCNQ1DNQ9H478 68 aa5.53□□□□□ -1.52
MSH5-218ENST00000494646 HSPB8Q9UJY1 196 aa5.53□□□□□ -1.52
MSH5-218ENST00000494646 CBY1Q9Y3M2 126 aa5.53□□□□□ -1.52
MSH5-218ENST00000494646 J3QQQ9 107 aa5.52□□□□□ -1.53
MSH5-218ENST00000494646 DPM2O94777 84 aa5.52□□□□□ -1.53
MSH5-218ENST00000494646 SPRR1AP35321 89 aa5.52□□□□□ -1.53
MSH5-218ENST00000494646 LINC00337Q8N6G1 96 aa5.52□□□□□ -1.53
MSH5-218ENST00000494646 IGLV7-46A0A075B6I9 117 aa5.51□□□□□ -1.53
MSH5-218ENST00000494646 KRTAP4-16G5E9R7 235 aaPredicted RBP5.51□□□□□ -1.53
MSH5-218ENST00000494646 IGKCP01834 107 aa5.51□□□□□ -1.53
MSH5-218ENST00000494646 PLNP26678 52 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms