RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 SMIM29Q86T20 159 aa4.74□□□□□ -1.65
VPS13B-205ENST00000493587 LOC110117498A0A087WWA1 95 aa4.74□□□□□ -1.65
VPS13B-205ENST00000493587 LINC01554Q52M75 96 aa4.74□□□□□ -1.65
VPS13B-205ENST00000493587 SPATA3Q8NHX4 192 aa4.74□□□□□ -1.65
VPS13B-205ENST00000493587 Q8N9W7 124 aa4.73□□□□□ -1.65
VPS13B-205ENST00000493587 ZANQ9Y493 2812 aa4.73□□□□□ -1.65
VPS13B-205ENST00000493587 SPG11Q96JI7 2443 aa4.73□□□□□ -1.65
VPS13B-205ENST00000493587 C3orf84H3BNL1 204 aa4.73□□□□□ -1.65
VPS13B-205ENST00000493587 LMO4P61968 165 aa4.73□□□□□ -1.65
VPS13B-205ENST00000493587 MINOS1Q5TGZ0 78 aa4.73□□□□□ -1.65
VPS13B-205ENST00000493587 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.73□□□□□ -1.65
VPS13B-205ENST00000493587 ESM1Q9NQ30 184 aa4.73□□□□□ -1.65
VPS13B-205ENST00000493587 PDZD2O15018 2839 aa4.73□□□□□ -1.65
VPS13B-205ENST00000493587 ZFYVE26Q68DK2 2539 aa4.73□□□□□ -1.65
VPS13B-205ENST00000493587 C9orf116Q5BN46 136 aaPredicted RBP4.72□□□□□ -1.65
VPS13B-205ENST00000493587 MAP1AP78559 2803 aaPredicted RBP4.72□□□□□ -1.65
VPS13B-205ENST00000493587 K7EQD1 137 aa4.72□□□□□ -1.65
VPS13B-205ENST00000493587 PRM2P04554 102 aa4.72□□□□□ -1.65
VPS13B-205ENST00000493587 B9D2Q9BPU9 175 aa4.72□□□□□ -1.65
VPS13B-205ENST00000493587 Q6ZSN1 163 aa4.71□□□□□ -1.65
VPS13B-205ENST00000493587 CENPEQ02224 2701 aa4.71□□□□□ -1.65
VPS13B-205ENST00000493587 WNK1Q9H4A3 2382 aa4.71□□□□□ -1.65
VPS13B-205ENST00000493587 IGHV3-53P01767 116 aa4.71□□□□□ -1.66
VPS13B-205ENST00000493587 LINC00208Q96KT6 92 aa4.71□□□□□ -1.66
VPS13B-205ENST00000493587 CYP4F30PQ9H0H9 118 aa4.71□□□□□ -1.66
VPS13B-205ENST00000493587 ZNF462Q96JM2 2506 aa4.71□□□□□ -1.66
VPS13B-205ENST00000493587 APCP25054 2843 aa4.71□□□□□ -1.66
VPS13B-205ENST00000493587 IGKV4-1P06312 121 aa4.71□□□□□ -1.66
VPS13B-205ENST00000493587 MXRA5Q9NR99 2828 aa4.7□□□□□ -1.66
VPS13B-205ENST00000493587 NDUFA4O00483 81 aa4.7□□□□□ -1.66
VPS13B-205ENST00000493587 HIGD2BQ4VC39 106 aa4.7□□□□□ -1.66
VPS13B-205ENST00000493587 LINC00167Q96N53 147 aa4.7□□□□□ -1.66
VPS13B-205ENST00000493587 ZNF706Q9Y5V0 76 aaPredicted RBP4.7□□□□□ -1.66
VPS13B-205ENST00000493587 MP68P56378 58 aa4.7□□□□□ -1.66
VPS13B-205ENST00000493587 LINC00575Q6W349 94 aa4.7□□□□□ -1.66
VPS13B-205ENST00000493587 IGLV4-60A0A075B6I1 120 aa4.7□□□□□ -1.66
VPS13B-205ENST00000493587 DNAJC9-AS1A6NH13 148 aa4.7□□□□□ -1.66
VPS13B-205ENST00000493587 NDUFB1O75438 58 aa4.7□□□□□ -1.66
VPS13B-205ENST00000493587 LINC00313P59037 77 aa4.7□□□□□ -1.66
VPS13B-205ENST00000493587 C10orf25Q5T742 122 aa4.7□□□□□ -1.66
VPS13B-205ENST00000493587 CDC42SE1Q9NRR8 79 aa4.7□□□□□ -1.66
VPS13B-205ENST00000493587 DNAH1Q9P2D7 4330 aa4.69□□□□□ -1.66
VPS13B-205ENST00000493587 TRGV2A0A075B6R0 118 aa4.69□□□□□ -1.66
VPS13B-205ENST00000493587 INSP01308 110 aa4.69□□□□□ -1.66
VPS13B-205ENST00000493587 CASC2Q6XLA1 102 aa4.69□□□□□ -1.66
VPS13B-205ENST00000493587 Q8N9P0 234 aaPredicted RBP4.69□□□□□ -1.66
VPS13B-205ENST00000493587 MOBPQ13875 183 aa4.69□□□□□ -1.66
VPS13B-205ENST00000493587 CDC42SE2Q9NRR3 84 aa4.69□□□□□ -1.66
VPS13B-205ENST00000493587 KLK12Q9UKR0 248 aa4.69□□□□□ -1.66
VPS13B-205ENST00000493587 ETDCA0A1B0GVM5 59 aa4.68□□□□□ -1.66
VPS13B-205ENST00000493587 FSHBP01225 129 aa4.68□□□□□ -1.66
VPS13B-205ENST00000493587 EPG5Q9HCE0 2579 aa4.68□□□□□ -1.66
VPS13B-205ENST00000493587 LY6G6DO95868 133 aa4.68□□□□□ -1.66
VPS13B-205ENST00000493587 CHD6Q8TD26 2715 aa4.68□□□□□ -1.66
VPS13B-205ENST00000493587 WFDC10AQ9H1F0 79 aa4.68□□□□□ -1.66
VPS13B-205ENST00000493587 MYO18BQ8IUG5 2567 aa4.68□□□□□ -1.66
VPS13B-205ENST00000493587 COX7BP24311 80 aa4.67□□□□□ -1.66
VPS13B-205ENST00000493587 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.67□□□□□ -1.66
VPS13B-205ENST00000493587 IGHV4-61A0A0C4DH41 118 aa4.67□□□□□ -1.66
VPS13B-205ENST00000493587 RETNLBQ9BQ08 111 aa4.67□□□□□ -1.66
VPS13B-205ENST00000493587 LOC101927531A0A1B0GV80 90 aa4.66□□□□□ -1.66
VPS13B-205ENST00000493587 TRGV1A0A0A0MS02 117 aa4.66□□□□□ -1.66
VPS13B-205ENST00000493587 SPAG11BQ08648 103 aa4.66□□□□□ -1.66
VPS13B-205ENST00000493587 C9orf66Q5T8R8 295 aa4.66□□□□□ -1.66
VPS13B-205ENST00000493587 KRTAP1-3Q8IUG1 177 aa4.66□□□□□ -1.66
VPS13B-205ENST00000493587 IGHV4-30-2A0A087WSY4 118 aa4.66□□□□□ -1.66
VPS13B-205ENST00000493587 Q75L30 129 aa4.66□□□□□ -1.66
VPS13B-205ENST00000493587 KRTAP10-9P60411 292 aa4.65□□□□□ -1.66
VPS13B-205ENST00000493587 ST20-AS1Q8NBB2 130 aa4.65□□□□□ -1.66
VPS13B-205ENST00000493587 MINOS1-NBL1R4GNA1 71 aa4.65□□□□□ -1.67
VPS13B-205ENST00000493587 CLPSL2Q6UWE3 100 aa4.65□□□□□ -1.67
VPS13B-205ENST00000493587 USP9YO00507 2555 aaPredicted RBP4.64□□□□□ -1.67
VPS13B-205ENST00000493587 H3BQ85 93 aa4.64□□□□□ -1.67
VPS13B-205ENST00000493587 SPAG11AQ6PDA7 123 aa4.64□□□□□ -1.67
VPS13B-205ENST00000493587 LRRK2Q5S007 2527 aa4.64□□□□□ -1.67
VPS13B-205ENST00000493587 DEFB116Q30KQ4 102 aa4.64□□□□□ -1.67
VPS13B-205ENST00000493587 ADM2Q7Z4H4 148 aa4.64□□□□□ -1.67
VPS13B-205ENST00000493587 CCL19Q99731 98 aa4.64□□□□□ -1.67
VPS13B-205ENST00000493587 DEFB112Q30KQ8 113 aa4.63□□□□□ -1.67
VPS13B-205ENST00000493587 LINC00612Q8N6U2 182 aa4.63□□□□□ -1.67
VPS13B-205ENST00000493587 DEFB105AQ8NG35 78 aa4.63□□□□□ -1.67
VPS13B-205ENST00000493587 TEX15Q9BXT5 2789 aa4.63□□□□□ -1.67
VPS13B-205ENST00000493587 POLQO75417 2590 aa4.63□□□□□ -1.67
VPS13B-205ENST00000493587 IGHV4-38-2P0DP08 117 aa4.62□□□□□ -1.67
VPS13B-205ENST00000493587 WFDC13Q8IUB5 93 aa4.62□□□□□ -1.67
VPS13B-205ENST00000493587 C5orf56Q8N8D9 126 aa4.62□□□□□ -1.67
VPS13B-205ENST00000493587 LY6EQ16553 131 aa4.61□□□□□ -1.67
VPS13B-205ENST00000493587 TRGV4A0A0C4DH28 118 aa4.61□□□□□ -1.67
VPS13B-205ENST00000493587 DEFB131AP59861 70 aa4.61□□□□□ -1.67
VPS13B-205ENST00000493587 A0A0J9YWU9 116 aa4.6□□□□□ -1.67
VPS13B-205ENST00000493587 IGHV3OR16-9A0A0B4J2B5 98 aa4.6□□□□□ -1.67
VPS13B-205ENST00000493587 WFDC10BQ8IUB3 73 aa4.6□□□□□ -1.67
VPS13B-205ENST00000493587 IGLV1-40P01703 118 aa4.6□□□□□ -1.67
VPS13B-205ENST00000493587 ELOF1P60002 83 aaKnown RBP4.6□□□□□ -1.67
VPS13B-205ENST00000493587 BRD3OSQ6XYD6 125 aa4.59□□□□□ -1.67
VPS13B-205ENST00000493587 COA5Q86WW8 74 aa4.59□□□□□ -1.67
VPS13B-205ENST00000493587 TRRAPQ9Y4A5 3859 aa4.59□□□□□ -1.67
VPS13B-205ENST00000493587 MSMBP08118 114 aa4.59□□□□□ -1.67
VPS13B-205ENST00000493587 ZCCHC13Q8WW36 166 aaKnown RBP4.59□□□□□ -1.67
VPS13B-205ENST00000493587 PTPN13Q12923 2485 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms