RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 SMIM2Q9BVW6 85 aa1.66□□□□□ -2.14
PTCD3-218ENST00000493430 TMEM191AQ9H0A3 160 aa1.66□□□□□ -2.14
PTCD3-218ENST00000493430 XAGE1AQ9HD64 81 aa1.66□□□□□ -2.14
PTCD3-218ENST00000493430 OSTCQ9NRP0 149 aa1.66□□□□□ -2.14
PTCD3-218ENST00000493430 CDC42SE2Q9NRR3 84 aa1.66□□□□□ -2.14
PTCD3-218ENST00000493430 PLAC8Q9NZF1 115 aa1.66□□□□□ -2.14
PTCD3-218ENST00000493430 PSORS1C2Q9UIG4 136 aa1.66□□□□□ -2.14
PTCD3-218ENST00000493430 LRP2P98164 4655 aa1.65□□□□□ -2.14
PTCD3-218ENST00000493430 TRBV6-5A0A0K0K1A5 114 aa1.65□□□□□ -2.15
PTCD3-218ENST00000493430 SMIM27A0A1W2PRY6 76 aa1.65□□□□□ -2.15
PTCD3-218ENST00000493430 A8MWL6 223 aa1.65□□□□□ -2.15
PTCD3-218ENST00000493430 TMEM250H0YL14 139 aa1.65□□□□□ -2.15
PTCD3-218ENST00000493430 FCER1GP30273 86 aa1.65□□□□□ -2.15
PTCD3-218ENST00000493430 SYCNQ0VAF6 134 aa1.65□□□□□ -2.15
PTCD3-218ENST00000493430 TMEM241Q24JQ0 296 aa1.65□□□□□ -2.15
PTCD3-218ENST00000493430 C1orf137Q5JT78 98 aa1.65□□□□□ -2.15
PTCD3-218ENST00000493430 TEX261Q6UWH6 196 aa1.65□□□□□ -2.15
PTCD3-218ENST00000493430 PRELID3AQ96N28 172 aa1.65□□□□□ -2.15
PTCD3-218ENST00000493430 CAMK2N2Q96S95 79 aa1.65□□□□□ -2.15
PTCD3-218ENST00000493430 RETNLBQ9BQ08 111 aa1.65□□□□□ -2.15
PTCD3-218ENST00000493430 TOMM7Q9P0U1 55 aa1.65□□□□□ -2.15
PTCD3-218ENST00000493430 NAT8Q9UHE5 227 aa1.65□□□□□ -2.15
PTCD3-218ENST00000493430 TRAV8-4A0A0B4J246 113 aa1.64□□□□□ -2.15
PTCD3-218ENST00000493430 IGHV1-58A0A0C4DH39 117 aa1.64□□□□□ -2.15
PTCD3-218ENST00000493430 TRBV27A0A0K0K1C4 114 aa1.64□□□□□ -2.15
PTCD3-218ENST00000493430 FAM240AA0A1B0GVK7 77 aa1.64□□□□□ -2.15
PTCD3-218ENST00000493430 K7EP13 123 aa1.64□□□□□ -2.15
PTCD3-218ENST00000493430 M0QXV9 152 aa1.64□□□□□ -2.15
PTCD3-218ENST00000493430 COX7A2LO14548 114 aa1.64□□□□□ -2.15
PTCD3-218ENST00000493430 SPINK8P0C7L1 97 aa1.64□□□□□ -2.15
PTCD3-218ENST00000493430 CKS2P33552 79 aa1.64□□□□□ -2.15
PTCD3-218ENST00000493430 IFI27P40305 119 aaPredicted RBP1.64□□□□□ -2.15
PTCD3-218ENST00000493430 NMUP48645 174 aa1.64□□□□□ -2.15
PTCD3-218ENST00000493430 CD164Q04900 197 aa1.64□□□□□ -2.15
PTCD3-218ENST00000493430 SS18Q15532 418 aa1.64□□□□□ -2.15
PTCD3-218ENST00000493430 EIF5AL1Q6IS14 154 aaKnown RBP1.64□□□□□ -2.15
PTCD3-218ENST00000493430 SMIM15Q7Z3B0 74 aa1.64□□□□□ -2.15
PTCD3-218ENST00000493430 BOD1L2Q8IYS8 172 aa1.64□□□□□ -2.15
PTCD3-218ENST00000493430 SLC7A5P1Q8MH63 180 aa1.64□□□□□ -2.15
PTCD3-218ENST00000493430 BORCS7Q96B45 105 aa1.64□□□□□ -2.15
PTCD3-218ENST00000493430 SMIM12Q96EX1 92 aa1.64□□□□□ -2.15
PTCD3-218ENST00000493430 BTF3L4Q96K17 158 aa1.64□□□□□ -2.15
PTCD3-218ENST00000493430 NAT8BQ9UHF3 227 aa1.64□□□□□ -2.15
PTCD3-218ENST00000493430 RNF213Q63HN8 5207 aa1.64□□□□□ -2.15
PTCD3-218ENST00000493430 A0A096LNJ9 63 aa1.63□□□□□ -2.15
PTCD3-218ENST00000493430 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.63□□□□□ -2.15
PTCD3-218ENST00000493430 TGIF2-C20orf24A0A0A6YYL0 155 aa1.63□□□□□ -2.15
PTCD3-218ENST00000493430 LOC107984640A0A0U1RRK4 108 aa1.63□□□□□ -2.15
PTCD3-218ENST00000493430 PSPHP1O15172 72 aa1.63□□□□□ -2.15
PTCD3-218ENST00000493430 APOMO95445 188 aa1.63□□□□□ -2.15
PTCD3-218ENST00000493430 UBE2D1P51668 147 aa1.63□□□□□ -2.15
PTCD3-218ENST00000493430 HBBP68871 147 aa1.63□□□□□ -2.15
PTCD3-218ENST00000493430 PRLHP81277 87 aa1.63□□□□□ -2.15
PTCD3-218ENST00000493430 ORMDL2Q53FV1 153 aa1.63□□□□□ -2.15
PTCD3-218ENST00000493430 TMEM97Q5BJF2 176 aa1.63□□□□□ -2.15
PTCD3-218ENST00000493430 TMEM136Q6ZRR5 245 aa1.63□□□□□ -2.15
PTCD3-218ENST00000493430 COMMD7Q86VX2 200 aa1.63□□□□□ -2.15
PTCD3-218ENST00000493430 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.63□□□□□ -2.15
PTCD3-218ENST00000493430 ZNF625Q96I27 306 aaPredicted RBP1.63□□□□□ -2.15
PTCD3-218ENST00000493430 CDKN2A-AS1Q9UH64 79 aa1.63□□□□□ -2.15
PTCD3-218ENST00000493430 SMIM26A0A096LP01 95 aa1.62□□□□□ -2.15
PTCD3-218ENST00000493430 TMEM238C9JI98 176 aa1.62□□□□□ -2.15
PTCD3-218ENST00000493430 MT-ND6P03923 174 aa1.62□□□□□ -2.15
PTCD3-218ENST00000493430 IGLV7-43P04211 117 aa1.62□□□□□ -2.15
PTCD3-218ENST00000493430 ZNF25P17030 456 aaPredicted RBP1.62□□□□□ -2.15
PTCD3-218ENST00000493430 RAB5BP61020 215 aa1.62□□□□□ -2.15
PTCD3-218ENST00000493430 CTAG1AP78358 180 aa1.62□□□□□ -2.15
PTCD3-218ENST00000493430 ORMDL3Q8N138 153 aa1.62□□□□□ -2.15
PTCD3-218ENST00000493430 LINC01600Q96MT4 127 aa1.62□□□□□ -2.15
PTCD3-218ENST00000493430 TIMM17AQ99595 171 aa1.62□□□□□ -2.15
PTCD3-218ENST00000493430 MAP1LC3AQ9H492 121 aa1.62□□□□□ -2.15
PTCD3-218ENST00000493430 SMDT1Q9H4I9 107 aa1.62□□□□□ -2.15
PTCD3-218ENST00000493430 BIN3Q9NQY0 253 aa1.62□□□□□ -2.15
PTCD3-218ENST00000493430 IGLV1-50A0A075B6I6 118 aa1.61□□□□□ -2.15
PTCD3-218ENST00000493430 TRBV24-1A0A075B6N3 115 aa1.61□□□□□ -2.15
PTCD3-218ENST00000493430 IGIPA6NJ69 53 aa1.61□□□□□ -2.15
PTCD3-218ENST00000493430 C11orf86A6NJI1 115 aa1.61□□□□□ -2.15
PTCD3-218ENST00000493430 F8W036 122 aa1.61□□□□□ -2.15
PTCD3-218ENST00000493430 NDUFA1O15239 70 aa1.61□□□□□ -2.15
PTCD3-218ENST00000493430 CXCL5P42830 114 aa1.61□□□□□ -2.15
PTCD3-218ENST00000493430 PKIAP61925 76 aa1.61□□□□□ -2.15
PTCD3-218ENST00000493430 UBE2BP63146 152 aa1.61□□□□□ -2.15
PTCD3-218ENST00000493430 PEA15Q15121 130 aa1.61□□□□□ -2.15
PTCD3-218ENST00000493430 KRTAP13-2Q52LG2 175 aa1.61□□□□□ -2.15
PTCD3-218ENST00000493430 IGFL1Q6UW32 110 aa1.61□□□□□ -2.15
PTCD3-218ENST00000493430 C3orf22Q8N5N4 141 aa1.61□□□□□ -2.15
PTCD3-218ENST00000493430 Q8N8P6 123 aa1.61□□□□□ -2.15
PTCD3-218ENST00000493430 TMEM141Q96I45 108 aa1.61□□□□□ -2.15
PTCD3-218ENST00000493430 AMELXQ99217 191 aa1.61□□□□□ -2.15
PTCD3-218ENST00000493430 PMCHL2Q9BQD1 86 aa1.61□□□□□ -2.15
PTCD3-218ENST00000493430 CBY1Q9Y3M2 126 aa1.61□□□□□ -2.15
PTCD3-218ENST00000493430 C1orf196B1AJZ1 125 aa1.6□□□□□ -2.15
PTCD3-218ENST00000493430 NCR3O14931 201 aa1.6□□□□□ -2.15
PTCD3-218ENST00000493430 NDUFS5O43920 106 aa1.6□□□□□ -2.15
PTCD3-218ENST00000493430 UBE2AP49459 152 aa1.6□□□□□ -2.15
PTCD3-218ENST00000493430 PSMB2P49721 201 aa1.6□□□□□ -2.15
PTCD3-218ENST00000493430 NDUFA6P56556 154 aa1.6□□□□□ -2.15
PTCD3-218ENST00000493430 TSPEAR-AS2P59090 65 aa1.6□□□□□ -2.15
PTCD3-218ENST00000493430 NPC2P61916 151 aa1.6□□□□□ -2.15
PTCD3-218ENST00000493430 MRPS36P82909 103 aaKnown RBP1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms