RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 RAPGEF2Q9Y4G8 1499 aa-0.11□□□□□ -2.43
HMGB1P30-201ENST00000492455 EPPK1P58107 5090 aaKnown RBP-0.11□□□□□ -2.43
HMGB1P30-201ENST00000492455 UBR4Q5T4S7 5183 aa-0.11□□□□□ -2.43
HMGB1P30-201ENST00000492455 MXRA5Q9NR99 2828 aa-0.12□□□□□ -2.43
HMGB1P30-201ENST00000492455 PSME4Q14997 1843 aa-0.12□□□□□ -2.43
HMGB1P30-201ENST00000492455 NDUFB1O75438 58 aa-0.12□□□□□ -2.43
HMGB1P30-201ENST00000492455 TGP01266 2768 aa-0.12□□□□□ -2.43
HMGB1P30-201ENST00000492455 HSPG2P98160 4391 aa-0.13□□□□□ -2.43
HMGB1P30-201ENST00000492455 FAM135AQ9P2D6 1515 aa-0.13□□□□□ -2.43
HMGB1P30-201ENST00000492455 PCNX1Q96RV3 2341 aa-0.13□□□□□ -2.43
HMGB1P30-201ENST00000492455 SETD2Q9BYW2 2564 aaPredicted RBP-0.13□□□□□ -2.43
HMGB1P30-201ENST00000492455 MYOM1P52179 1685 aa-0.13□□□□□ -2.43
HMGB1P30-201ENST00000492455 NRKQ7Z2Y5 1582 aa-0.13□□□□□ -2.43
HMGB1P30-201ENST00000492455 PZPP20742 1482 aa-0.13□□□□□ -2.43
HMGB1P30-201ENST00000492455 MRC2Q9UBG0 1479 aa-0.13□□□□□ -2.43
HMGB1P30-201ENST00000492455 IQCF6A8MYZ5 107 aa-0.13□□□□□ -2.43
HMGB1P30-201ENST00000492455 H3BNG1 76 aa-0.13□□□□□ -2.43
HMGB1P30-201ENST00000492455 M0R143 59 aa-0.13□□□□□ -2.43
HMGB1P30-201ENST00000492455 C3orf79P0CE67 100 aa-0.13□□□□□ -2.43
HMGB1P30-201ENST00000492455 IGLC2P0DOY2 106 aa-0.13□□□□□ -2.43
HMGB1P30-201ENST00000492455 IGLC3P0DOY3 106 aa-0.13□□□□□ -2.43
HMGB1P30-201ENST00000492455 SPRR2AP35326 72 aa-0.13□□□□□ -2.43
HMGB1P30-201ENST00000492455 KRTAP20-2Q3LI61 65 aa-0.13□□□□□ -2.43
HMGB1P30-201ENST00000492455 WFDC9Q8NEX5 89 aa-0.13□□□□□ -2.43
HMGB1P30-201ENST00000492455 SHROOM2Q13796 1616 aa-0.13□□□□□ -2.43
HMGB1P30-201ENST00000492455 KIAA1109Q2LD37 5005 aa-0.13□□□□□ -2.43
HMGB1P30-201ENST00000492455 HYDINQ4G0P3 5121 aa-0.14□□□□□ -2.43
HMGB1P30-201ENST00000492455 NKTRP30414 1462 aaKnown RBP-0.14□□□□□ -2.43
HMGB1P30-201ENST00000492455 F8WEM9 126 aa-0.14□□□□□ -2.43
HMGB1P30-201ENST00000492455 H7BZZ5 65 aa-0.14□□□□□ -2.43
HMGB1P30-201ENST00000492455 MT4P47944 62 aa-0.14□□□□□ -2.43
HMGB1P30-201ENST00000492455 RBP2P50120 134 aa-0.14□□□□□ -2.43
HMGB1P30-201ENST00000492455 KIAA0556O60303 1618 aa-0.14□□□□□ -2.43
HMGB1P30-201ENST00000492455 TET3O43151 1660 aa-0.14□□□□□ -2.43
HMGB1P30-201ENST00000492455 DIP2CQ9Y2E4 1556 aa-0.15□□□□□ -2.43
HMGB1P30-201ENST00000492455 RYR2Q92736 4967 aa-0.15□□□□□ -2.43
HMGB1P30-201ENST00000492455 XRN1Q8IZH2 1706 aaKnown RBP-0.15□□□□□ -2.43
HMGB1P30-201ENST00000492455 ANKRD36BQ8N2N9 1353 aa-0.15□□□□□ -2.43
HMGB1P30-201ENST00000492455 EPG5Q9HCE0 2579 aa-0.15□□□□□ -2.43
HMGB1P30-201ENST00000492455 BSNQ9UPA5 3926 aa-0.15□□□□□ -2.43
HMGB1P30-201ENST00000492455 HIVEP1P15822 2718 aa-0.15□□□□□ -2.43
HMGB1P30-201ENST00000492455 HMGN2P05204 90 aaKnown RBP-0.15□□□□□ -2.43
HMGB1P30-201ENST00000492455 COX7BP24311 80 aa-0.15□□□□□ -2.43
HMGB1P30-201ENST00000492455 IFI27P40305 119 aaPredicted RBP-0.15□□□□□ -2.43
HMGB1P30-201ENST00000492455 NCMAPQ5T1S8 102 aa-0.15□□□□□ -2.43
HMGB1P30-201ENST00000492455 PRO3102Q9H379 93 aa-0.15□□□□□ -2.43
HMGB1P30-201ENST00000492455 SLIT1O75093 1534 aa-0.15□□□□□ -2.43
HMGB1P30-201ENST00000492455 PRKDCP78527 4128 aaKnown RBP-0.15□□□□□ -2.43
HMGB1P30-201ENST00000492455 CUL7Q14999 1698 aa-0.15□□□□□ -2.43
HMGB1P30-201ENST00000492455 TRANK1O15050 2925 aa-0.15□□□□□ -2.43
HMGB1P30-201ENST00000492455 RYR3Q15413 4870 aa-0.15□□□□□ -2.43
HMGB1P30-201ENST00000492455 FYCO1Q9BQS8 1478 aa-0.16□□□□□ -2.43
HMGB1P30-201ENST00000492455 RNF213Q63HN8 5207 aa-0.16□□□□□ -2.43
HMGB1P30-201ENST00000492455 TOP2BQ02880 1626 aa-0.16□□□□□ -2.43
HMGB1P30-201ENST00000492455 HERC1Q15751 4861 aa-0.16□□□□□ -2.43
HMGB1P30-201ENST00000492455 C9orf92A6NGG3 77 aa-0.16□□□□□ -2.44
HMGB1P30-201ENST00000492455 KRTAP19-8Q3LI54 63 aa-0.16□□□□□ -2.44
HMGB1P30-201ENST00000492455 HECTD1Q9ULT8 2610 aa-0.16□□□□□ -2.44
HMGB1P30-201ENST00000492455 ANKRD50Q9ULJ7 1429 aa-0.16□□□□□ -2.44
HMGB1P30-201ENST00000492455 ARHGEF5Q12774 1597 aa-0.16□□□□□ -2.44
HMGB1P30-201ENST00000492455 LRRC37AA6NMS7 1700 aa-0.16□□□□□ -2.44
HMGB1P30-201ENST00000492455 ABCA13Q86UQ4 5058 aa-0.16□□□□□ -2.44
HMGB1P30-201ENST00000492455 FAT2Q9NYQ8 4349 aa-0.17□□□□□ -2.44
HMGB1P30-201ENST00000492455 HERC2O95714 4834 aa-0.17□□□□□ -2.44
HMGB1P30-201ENST00000492455 CCNB3Q8WWL7 1395 aa-0.17□□□□□ -2.44
HMGB1P30-201ENST00000492455 BTAF1O14981 1849 aa-0.17□□□□□ -2.44
HMGB1P30-201ENST00000492455 SPG11Q96JI7 2443 aa-0.17□□□□□ -2.44
HMGB1P30-201ENST00000492455 PRRC2CQ9Y520 2896 aaKnown RBP-0.17□□□□□ -2.44
HMGB1P30-201ENST00000492455 TACC2O95359 2948 aa-0.17□□□□□ -2.44
HMGB1P30-201ENST00000492455 MT-ATP8P03928 68 aa-0.17□□□□□ -2.44
HMGB1P30-201ENST00000492455 S100A8P05109 93 aa-0.17□□□□□ -2.44
HMGB1P30-201ENST00000492455 ACYP1P07311 99 aa-0.17□□□□□ -2.44
HMGB1P30-201ENST00000492455 HMGA1P17096 107 aaKnown RBP-0.17□□□□□ -2.44
HMGB1P30-201ENST00000492455 NUP188Q5SRE5 1749 aa-0.17□□□□□ -2.44
HMGB1P30-201ENST00000492455 LRRC9Q6ZRR7 1453 aa-0.17□□□□□ -2.44
HMGB1P30-201ENST00000492455 SPTBN4Q9H254 2564 aa-0.17□□□□□ -2.44
HMGB1P30-201ENST00000492455 PKHD1P08F94 4074 aa-0.18□□□□□ -2.44
HMGB1P30-201ENST00000492455 KANTRA0A1W2PQU2 76 aa-0.18□□□□□ -2.44
HMGB1P30-201ENST00000492455 NDUFA3O95167 84 aa-0.18□□□□□ -2.44
HMGB1P30-201ENST00000492455 LINC00158P58513 81 aa-0.18□□□□□ -2.44
HMGB1P30-201ENST00000492455 SNRPFP62306 86 aaKnown RBP-0.18□□□□□ -2.44
HMGB1P30-201ENST00000492455 PYY3Q5JQD4 70 aa-0.18□□□□□ -2.44
HMGB1P30-201ENST00000492455 TEX14Q8IWB6 1497 aa-0.18□□□□□ -2.44
HMGB1P30-201ENST00000492455 HECTD4Q9Y4D8 3996 aa-0.18□□□□□ -2.44
HMGB1P30-201ENST00000492455 CUX1P39880 1505 aa-0.18□□□□□ -2.44
HMGB1P30-201ENST00000492455 ZFHX3Q15911 3703 aa-0.18□□□□□ -2.44
HMGB1P30-201ENST00000492455 KNL1Q8NG31 2342 aa-0.19□□□□□ -2.44
HMGB1P30-201ENST00000492455 LRP1BQ9NZR2 4599 aa-0.19□□□□□ -2.44
HMGB1P30-201ENST00000492455 CNTLNQ9NXG0 1405 aa-0.19□□□□□ -2.44
HMGB1P30-201ENST00000492455 A0A087WXM4 84 aa-0.19□□□□□ -2.44
HMGB1P30-201ENST00000492455 CEBPZOSA8MTT3 80 aa-0.19□□□□□ -2.44
HMGB1P30-201ENST00000492455 K7EP34 96 aa-0.19□□□□□ -2.44
HMGB1P30-201ENST00000492455 MRPL33O75394 65 aaKnown RBP-0.19□□□□□ -2.44
HMGB1P30-201ENST00000492455 IFI6P09912 130 aa-0.19□□□□□ -2.44
HMGB1P30-201ENST00000492455 PKIAP61925 76 aa-0.19□□□□□ -2.44
HMGB1P30-201ENST00000492455 C14orf144Q96I85 54 aa-0.19□□□□□ -2.44
HMGB1P30-201ENST00000492455 RABAC1Q9UI14 185 aa-0.19□□□□□ -2.44
HMGB1P30-201ENST00000492455 PDE4DIPQ5VU43 2346 aa-0.19□□□□□ -2.44
HMGB1P30-201ENST00000492455 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.19□□□□□ -2.44
HMGB1P30-201ENST00000492455 FMN2Q9NZ56 1722 aa-0.19□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms