RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 KRTAP1-4P0C5Y4 121 aa4.97□□□□□ -1.61
LSM2-213ENST00000491421 MRPL55Q7Z7F7 128 aaKnown RBP4.97□□□□□ -1.61
LSM2-213ENST00000491421 ATP5LO75964 103 aa4.96□□□□□ -1.62
LSM2-213ENST00000491421 NDUFA6P56556 154 aa4.96□□□□□ -1.62
LSM2-213ENST00000491421 RAB5BP61020 215 aa4.96□□□□□ -1.62
LSM2-213ENST00000491421 TRAPPC1Q9Y5R8 145 aa4.96□□□□□ -1.62
LSM2-213ENST00000491421 A0A096LNJ9 63 aa4.95□□□□□ -1.62
LSM2-213ENST00000491421 RPL37AP8A6NKH3 93 aa4.95□□□□□ -1.62
LSM2-213ENST00000491421 IGLC3P0DOY3 106 aa4.95□□□□□ -1.62
LSM2-213ENST00000491421 RPL28P46779 137 aaKnown RBP4.95□□□□□ -1.62
LSM2-213ENST00000491421 C18orf32Q8TCD1 76 aa4.95□□□□□ -1.62
LSM2-213ENST00000491421 V9GYY9 64 aa4.95□□□□□ -1.62
LSM2-213ENST00000491421 IGLV5-39A0A0G2JS06 123 aa4.94□□□□□ -1.62
LSM2-213ENST00000491421 BCE1O60756 84 aa4.94□□□□□ -1.62
LSM2-213ENST00000491421 HBDP02042 147 aa4.94□□□□□ -1.62
LSM2-213ENST00000491421 APOC3P02656 99 aa4.94□□□□□ -1.62
LSM2-213ENST00000491421 LINC00614P0C842 121 aa4.94□□□□□ -1.62
LSM2-213ENST00000491421 PMCHL1Q16048 86 aa4.94□□□□□ -1.62
LSM2-213ENST00000491421 NKAPP1Q8N9T2 125 aa4.94□□□□□ -1.62
LSM2-213ENST00000491421 URB1-AS1Q96HZ7 61 aa4.94□□□□□ -1.62
LSM2-213ENST00000491421 LINC00167Q96N53 147 aa4.94□□□□□ -1.62
LSM2-213ENST00000491421 IGLV5-37A0A075B6J1 123 aa4.93□□□□□ -1.62
LSM2-213ENST00000491421 TMEM238C9JI98 176 aa4.93□□□□□ -1.62
LSM2-213ENST00000491421 SNAPINO95295 136 aa4.93□□□□□ -1.62
LSM2-213ENST00000491421 ZNF22P17026 224 aaPredicted RBP4.93□□□□□ -1.62
LSM2-213ENST00000491421 PFN2P35080 140 aa4.93□□□□□ -1.62
LSM2-213ENST00000491421 NDUFA5Q16718 116 aa4.93□□□□□ -1.62
LSM2-213ENST00000491421 BAGE3Q86Y29 109 aa4.92□□□□□ -1.62
LSM2-213ENST00000491421 SVBPQ8N300 66 aa4.92□□□□□ -1.62
LSM2-213ENST00000491421 ERG28Q9UKR5 140 aa4.92□□□□□ -1.62
LSM2-213ENST00000491421 IGKV2-28A0A075B6P5 120 aa4.91□□□□□ -1.62
LSM2-213ENST00000491421 C11orf86A6NJI1 115 aa4.91□□□□□ -1.62
LSM2-213ENST00000491421 IGKV2D-28P01615 120 aa4.91□□□□□ -1.62
LSM2-213ENST00000491421 UBE2AP49459 152 aa4.91□□□□□ -1.62
LSM2-213ENST00000491421 TMEM170BQ5T4T1 132 aa4.91□□□□□ -1.62
LSM2-213ENST00000491421 SND1-IT1Q9HBX3 110 aa4.91□□□□□ -1.62
LSM2-213ENST00000491421 LPAP08519 4548 aa4.9□□□□□ -1.62
LSM2-213ENST00000491421 SCO1O75880 301 aa4.9□□□□□ -1.63
LSM2-213ENST00000491421 COX17Q14061 63 aa4.9□□□□□ -1.63
LSM2-213ENST00000491421 PRR4Q16378 134 aa4.9□□□□□ -1.63
LSM2-213ENST00000491421 SFTA2Q6UW10 78 aa4.9□□□□□ -1.63
LSM2-213ENST00000491421 ZNF625Q96I27 306 aaPredicted RBP4.9□□□□□ -1.63
LSM2-213ENST00000491421 A0A087X002 238 aa4.89□□□□□ -1.63
LSM2-213ENST00000491421 CRYGAP11844 174 aa4.89□□□□□ -1.63
LSM2-213ENST00000491421 RPL24P83731 157 aaKnown RBP4.89□□□□□ -1.63
LSM2-213ENST00000491421 KRTAP13-1Q8IUC0 172 aa4.89□□□□□ -1.63
LSM2-213ENST00000491421 CHCHD1Q96BP2 118 aaKnown RBP4.89□□□□□ -1.63
LSM2-213ENST00000491421 TSPAN13O95857 204 aa4.88□□□□□ -1.63
LSM2-213ENST00000491421 TYMSOSQ8TAI1 123 aa4.88□□□□□ -1.63
LSM2-213ENST00000491421 YPEL4Q96NS1 127 aa4.88□□□□□ -1.63
LSM2-213ENST00000491421 ANAPC11Q9NYG5 84 aa4.88□□□□□ -1.63
LSM2-213ENST00000491421 TRAV12-1A0A0B4J245 112 aa4.87□□□□□ -1.63
LSM2-213ENST00000491421 TMEM223A0PJW6 202 aa4.87□□□□□ -1.63
LSM2-213ENST00000491421 LINC00158P58513 81 aa4.87□□□□□ -1.63
LSM2-213ENST00000491421 PRLHP81277 87 aa4.87□□□□□ -1.63
LSM2-213ENST00000491421 FAM19A1Q7Z5A9 133 aa4.87□□□□□ -1.63
LSM2-213ENST00000491421 LINC00518Q8N0U6 118 aa4.87□□□□□ -1.63
LSM2-213ENST00000491421 IFI27L1Q96BM0 104 aa4.87□□□□□ -1.63
LSM2-213ENST00000491421 TMEM126AQ9H061 195 aa4.87□□□□□ -1.63
LSM2-213ENST00000491421 M0R378 163 aa4.86□□□□□ -1.63
LSM2-213ENST00000491421 Q8NDZ9 215 aa4.86□□□□□ -1.63
LSM2-213ENST00000491421 PAM16Q9Y3D7 125 aa4.86□□□□□ -1.63
LSM2-213ENST00000491421 FAM229BQ4G0N7 80 aa4.85□□□□□ -1.63
LSM2-213ENST00000491421 KRTAP13-2Q52LG2 175 aa4.85□□□□□ -1.63
LSM2-213ENST00000491421 CBLN2Q8IUK8 224 aa4.85□□□□□ -1.63
LSM2-213ENST00000491421 IGKV2D-26A0A0A0MRZ7 120 aa4.84□□□□□ -1.63
LSM2-213ENST00000491421 SMIM13P0DJ93 91 aa4.84□□□□□ -1.63
LSM2-213ENST00000491421 Q75L30 129 aa4.84□□□□□ -1.63
LSM2-213ENST00000491421 FAM19A2Q8N3H0 131 aa4.84□□□□□ -1.63
LSM2-213ENST00000491421 MEIG1Q5JSS6 88 aa4.83□□□□□ -1.64
LSM2-213ENST00000491421 LINC00304Q8N9R0 145 aa4.83□□□□□ -1.64
LSM2-213ENST00000491421 NCR3O14931 201 aa4.82□□□□□ -1.64
LSM2-213ENST00000491421 TRGC2P03986 189 aa4.82□□□□□ -1.64
LSM2-213ENST00000491421 MIR7-3HGQ8N6C7 128 aa4.82□□□□□ -1.64
LSM2-213ENST00000491421 PLEKHB2Q96CS7 222 aa4.82□□□□□ -1.64
LSM2-213ENST00000491421 HIGD2AQ9BW72 106 aa4.82□□□□□ -1.64
LSM2-213ENST00000491421 NDUFA12Q9UI09 145 aa4.82□□□□□ -1.64
LSM2-213ENST00000491421 MYMXA0A1B0GTQ4 84 aa4.81□□□□□ -1.64
LSM2-213ENST00000491421 A0A1B0GV72 72 aa4.81□□□□□ -1.64
LSM2-213ENST00000491421 LINC00587B1AMM8 73 aa4.81□□□□□ -1.64
LSM2-213ENST00000491421 SERF1AO75920 110 aa4.81□□□□□ -1.64
LSM2-213ENST00000491421 LEPROTL1O95214 131 aa4.81□□□□□ -1.64
LSM2-213ENST00000491421 SEC61BP60468 96 aaKnown RBP4.81□□□□□ -1.64
LSM2-213ENST00000491421 TAL2Q16559 108 aa4.81□□□□□ -1.64
LSM2-213ENST00000491421 SPANXB1Q9NS25 103 aaPredicted RBP4.81□□□□□ -1.64
LSM2-213ENST00000491421 C9orf118A6NHY6 69 aa4.8□□□□□ -1.64
LSM2-213ENST00000491421 PLNP26678 52 aa4.8□□□□□ -1.64
LSM2-213ENST00000491421 LINC00310P59036 64 aa4.8□□□□□ -1.64
LSM2-213ENST00000491421 RETNLBQ9BQ08 111 aa4.8□□□□□ -1.64
LSM2-213ENST00000491421 HSPB8Q9UJY1 196 aa4.8□□□□□ -1.64
LSM2-213ENST00000491421 MUC2Q02817 5179 aa4.8□□□□□ -1.64
LSM2-213ENST00000491421 LEPROTO15243 131 aa4.79□□□□□ -1.64
LSM2-213ENST00000491421 TSPEAR-AS2P59090 65 aa4.79□□□□□ -1.64
LSM2-213ENST00000491421 MTURNQ8N3F0 131 aa4.79□□□□□ -1.64
LSM2-213ENST00000491421 C3orf22Q8N5N4 141 aa4.79□□□□□ -1.64
LSM2-213ENST00000491421 SPRR4Q96PI1 79 aa4.79□□□□□ -1.64
LSM2-213ENST00000491421 KCNQ1DNQ9H478 68 aa4.79□□□□□ -1.64
LSM2-213ENST00000491421 ZNF706Q9Y5V0 76 aaPredicted RBP4.79□□□□□ -1.64
LSM2-213ENST00000491421 TRBV10-3A0A0K0K1G6 114 aa4.78□□□□□ -1.64
LSM2-213ENST00000491421 ETDCA0A1B0GVM5 59 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms