RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 FMN2Q9NZ56 1722 aa0.76□□□□□ -2.29
VPS26A-206ENST00000489794 RRBP1Q9P2E9 1410 aaKnown RBP0.76□□□□□ -2.29
VPS26A-206ENST00000489794 CFDP00746 253 aaPredicted RBP0.76□□□□□ -2.29
VPS26A-206ENST00000489794 CRIPTQ9P021 101 aa0.76□□□□□ -2.29
VPS26A-206ENST00000489794 UNC79Q9P2D8 2635 aa0.75□□□□□ -2.29
VPS26A-206ENST00000489794 Q5BKY6 102 aa0.75□□□□□ -2.29
VPS26A-206ENST00000489794 BVES-AS1Q5T3Y7 98 aa0.75□□□□□ -2.29
VPS26A-206ENST00000489794 ZNF292O60281 2723 aa0.75□□□□□ -2.29
VPS26A-206ENST00000489794 PPRC1Q5VV67 1664 aaKnown RBP0.75□□□□□ -2.29
VPS26A-206ENST00000489794 Q5VSD8 79 aa0.74□□□□□ -2.29
VPS26A-206ENST00000489794 GAFA1Q96PS6 74 aa0.74□□□□□ -2.29
VPS26A-206ENST00000489794 QSER1Q2KHR3 1735 aa0.74□□□□□ -2.29
VPS26A-206ENST00000489794 AKAP6Q13023 2319 aa0.73□□□□□ -2.29
VPS26A-206ENST00000489794 UBR3Q6ZT12 1888 aa0.73□□□□□ -2.29
VPS26A-206ENST00000489794 LTN1O94822 1766 aa0.73□□□□□ -2.29
VPS26A-206ENST00000489794 PIEZO2Q9H5I5 2752 aa0.73□□□□□ -2.29
VPS26A-206ENST00000489794 SPTY2D1-AS1A0A0U1RR47 76 aa0.73□□□□□ -2.29
VPS26A-206ENST00000489794 COX8AP10176 69 aa0.73□□□□□ -2.29
VPS26A-206ENST00000489794 CELSR2Q9HCU4 2923 aa0.73□□□□□ -2.29
VPS26A-206ENST00000489794 ZNF831Q5JPB2 1677 aa0.72□□□□□ -2.29
VPS26A-206ENST00000489794 PKDREJQ9NTG1 2253 aa0.72□□□□□ -2.29
VPS26A-206ENST00000489794 PIK3C2BO00750 1634 aa0.72□□□□□ -2.29
VPS26A-206ENST00000489794 IGF2RP11717 2491 aa0.72□□□□□ -2.29
VPS26A-206ENST00000489794 CFAP74Q9C0B2 1584 aa0.72□□□□□ -2.29
VPS26A-206ENST00000489794 TRAV21A0A0B4J279 112 aa0.72□□□□□ -2.29
VPS26A-206ENST00000489794 I3L3M4 83 aa0.72□□□□□ -2.29
VPS26A-206ENST00000489794 SPRR1BP22528 89 aa0.72□□□□□ -2.29
VPS26A-206ENST00000489794 NKTRP30414 1462 aaKnown RBP0.72□□□□□ -2.29
VPS26A-206ENST00000489794 GVINP1Q7Z2Y8 2422 aa0.72□□□□□ -2.29
VPS26A-206ENST00000489794 ABCC1P33527 1531 aa0.71□□□□□ -2.3
VPS26A-206ENST00000489794 URB2Q14146 1524 aaKnown RBP0.71□□□□□ -2.3
VPS26A-206ENST00000489794 SPINK1P00995 79 aa0.71□□□□□ -2.3
VPS26A-206ENST00000489794 COX7BP24311 80 aa0.71□□□□□ -2.3
VPS26A-206ENST00000489794 SPRR1AP35321 89 aa0.71□□□□□ -2.3
VPS26A-206ENST00000489794 WFDC9Q8NEX5 89 aa0.71□□□□□ -2.3
VPS26A-206ENST00000489794 LRRIQ1Q96JM4 1722 aa0.71□□□□□ -2.3
VPS26A-206ENST00000489794 USP24Q9UPU5 2620 aa0.71□□□□□ -2.3
VPS26A-206ENST00000489794 USP32Q8NFA0 1604 aa0.71□□□□□ -2.3
VPS26A-206ENST00000489794 MAP3K1Q13233 1512 aa0.7□□□□□ -2.3
VPS26A-206ENST00000489794 POLR1AO95602 1720 aaPredicted RBP0.7□□□□□ -2.3
VPS26A-206ENST00000489794 CPSF4LA6NMK7 179 aaKnown RBP0.7□□□□□ -2.3
VPS26A-206ENST00000489794 DEFB109BQ30KR1 87 aa0.7□□□□□ -2.3
VPS26A-206ENST00000489794 FXYD6Q9H0Q3 95 aa0.7□□□□□ -2.3
VPS26A-206ENST00000489794 ZFYVE26Q68DK2 2539 aa0.69□□□□□ -2.3
VPS26A-206ENST00000489794 NCOA2Q15596 1464 aa0.69□□□□□ -2.3
VPS26A-206ENST00000489794 CEP170BQ9Y4F5 1589 aaPredicted RBP0.69□□□□□ -2.3
VPS26A-206ENST00000489794 CHD9Q3L8U1 2897 aa0.68□□□□□ -2.3
VPS26A-206ENST00000489794 RGPD8O14715 1765 aaPredicted RBP0.68□□□□□ -2.3
VPS26A-206ENST00000489794 RGPD5Q99666 1765 aa0.68□□□□□ -2.3
VPS26A-206ENST00000489794 BCORQ6W2J9 1755 aa0.68□□□□□ -2.3
VPS26A-206ENST00000489794 KRTAP21-1Q3LI58 79 aa0.67□□□□□ -2.3
VPS26A-206ENST00000489794 DEFB121Q5J5C9 76 aa0.67□□□□□ -2.3
VPS26A-206ENST00000489794 ATP5EP2Q5VTU8 51 aa0.67□□□□□ -2.3
VPS26A-206ENST00000489794 DEFB105AQ8NG35 78 aa0.67□□□□□ -2.3
VPS26A-206ENST00000489794 C18orf32Q8TCD1 76 aa0.67□□□□□ -2.3
VPS26A-206ENST00000489794 MRPL34Q9BQ48 92 aaKnown RBP0.67□□□□□ -2.3
VPS26A-206ENST00000489794 PTPN23Q9H3S7 1636 aa0.67□□□□□ -2.3
VPS26A-206ENST00000489794 ABCA8O94911 1581 aa0.66□□□□□ -2.3
VPS26A-206ENST00000489794 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.66□□□□□ -2.3
VPS26A-206ENST00000489794 ANKARQ7Z5J8 1434 aa0.66□□□□□ -2.3
VPS26A-206ENST00000489794 A0A087WXM4 84 aa0.66□□□□□ -2.3
VPS26A-206ENST00000489794 NDUFB1O75438 58 aa0.66□□□□□ -2.3
VPS26A-206ENST00000489794 APLNQ9ULZ1 77 aa0.66□□□□□ -2.3
VPS26A-206ENST00000489794 NAV2Q8IVL1 2488 aa0.65□□□□□ -2.3
VPS26A-206ENST00000489794 DOT1LQ8TEK3 1739 aa0.65□□□□□ -2.31
VPS26A-206ENST00000489794 RPL38P63173 70 aaKnown RBP0.65□□□□□ -2.31
VPS26A-206ENST00000489794 KLK9Q2XQG4 91 aa0.65□□□□□ -2.31
VPS26A-206ENST00000489794 MAGI3Q5TCQ9 1506 aa0.64□□□□□ -2.31
VPS26A-206ENST00000489794 SMIM13P0DJ93 91 aa0.64□□□□□ -2.31
VPS26A-206ENST00000489794 PREX1Q8TCU6 1659 aa0.64□□□□□ -2.31
VPS26A-206ENST00000489794 ARFGEF2Q9Y6D5 1785 aa0.64□□□□□ -2.31
VPS26A-206ENST00000489794 IFI6P09912 130 aa0.63□□□□□ -2.31
VPS26A-206ENST00000489794 TIAM2Q8IVF5 1701 aa0.63□□□□□ -2.31
VPS26A-206ENST00000489794 CLIP1P30622 1438 aa0.63□□□□□ -2.31
VPS26A-206ENST00000489794 SCN11AQ9UI33 1791 aa0.62□□□□□ -2.31
VPS26A-206ENST00000489794 MYO5CQ9NQX4 1742 aa0.62□□□□□ -2.31
VPS26A-206ENST00000489794 U3KQA8 63 aa0.62□□□□□ -2.31
VPS26A-206ENST00000489794 IQGAP3Q86VI3 1631 aa0.61□□□□□ -2.31
VPS26A-206ENST00000489794 UMAD1C9J7I0 102 aa0.61□□□□□ -2.31
VPS26A-206ENST00000489794 CCL22O00626 93 aa0.61□□□□□ -2.31
VPS26A-206ENST00000489794 IFI27P40305 119 aaPredicted RBP0.61□□□□□ -2.31
VPS26A-206ENST00000489794 CFAP43Q8NDM7 1665 aa0.61□□□□□ -2.31
VPS26A-206ENST00000489794 UBR4Q5T4S7 5183 aa0.61□□□□□ -2.31
VPS26A-206ENST00000489794 AHNAKQ09666 5890 aaKnown RBP0.6□□□□□ -2.31
VPS26A-206ENST00000489794 H1FX-AS1Q4G0G2 97 aa0.6□□□□□ -2.31
VPS26A-206ENST00000489794 HEPN1Q6WQI6 88 aa0.6□□□□□ -2.31
VPS26A-206ENST00000489794 NCOR1O75376 2440 aa0.6□□□□□ -2.31
VPS26A-206ENST00000489794 CNOT1A5YKK6 2376 aaKnown RBP0.6□□□□□ -2.31
VPS26A-206ENST00000489794 ANK2Q01484 3957 aa0.59□□□□□ -2.31
VPS26A-206ENST00000489794 SPINK4O60575 86 aa0.59□□□□□ -2.31
VPS26A-206ENST00000489794 NREPQ16612 68 aa0.59□□□□□ -2.31
VPS26A-206ENST00000489794 CCDC88BA6NC98 1476 aa0.59□□□□□ -2.32
VPS26A-206ENST00000489794 LELP1Q5T871 98 aa0.58□□□□□ -2.32
VPS26A-206ENST00000489794 SMCO4Q9NRQ5 59 aa0.58□□□□□ -2.32
VPS26A-206ENST00000489794 UGGT2Q9NYU1 1516 aa0.58□□□□□ -2.32
VPS26A-206ENST00000489794 CACNA1AO00555 2505 aa0.58□□□□□ -2.32
VPS26A-206ENST00000489794 NWD1Q149M9 1564 aa0.57□□□□□ -2.32
VPS26A-206ENST00000489794 TNRC6CQ9HCJ0 1690 aaKnown RBP0.57□□□□□ -2.32
VPS26A-206ENST00000489794 CSPG4Q6UVK1 2322 aa0.57□□□□□ -2.32
VPS26A-206ENST00000489794 CHD6Q8TD26 2715 aa0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms