RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 RAB37Q96AX2 223 aa4.66□□□□□ -1.66
EXOSC3-206ENST00000489414 CHCHD5Q9BSY4 110 aa4.66□□□□□ -1.66
EXOSC3-206ENST00000489414 SPANXB1Q9NS25 103 aaPredicted RBP4.66□□□□□ -1.66
EXOSC3-206ENST00000489414 IGHV3-64A0A075B6Q5 118 aa4.65□□□□□ -1.67
EXOSC3-206ENST00000489414 TRBV6-8A0A0A6YYG3 113 aa4.65□□□□□ -1.67
EXOSC3-206ENST00000489414 IGHV1-58A0A0C4DH39 117 aa4.65□□□□□ -1.67
EXOSC3-206ENST00000489414 H3BUT2 72 aa4.65□□□□□ -1.67
EXOSC3-206ENST00000489414 IGHV3-30-3P0DP02 117 aa4.65□□□□□ -1.67
EXOSC3-206ENST00000489414 FABP2P12104 132 aa4.65□□□□□ -1.67
EXOSC3-206ENST00000489414 SPINK6Q6UWN8 80 aa4.65□□□□□ -1.67
EXOSC3-206ENST00000489414 SH2D6Q7Z4S9 175 aa4.65□□□□□ -1.67
EXOSC3-206ENST00000489414 TRAV13-1A0A0B4J241 112 aa4.64□□□□□ -1.67
EXOSC3-206ENST00000489414 LOC100131303A0A0U1RQF7 123 aa4.64□□□□□ -1.67
EXOSC3-206ENST00000489414 GAGE10A6NGK3 116 aa4.64□□□□□ -1.67
EXOSC3-206ENST00000489414 SPINK8P0C7L1 97 aa4.64□□□□□ -1.67
EXOSC3-206ENST00000489414 RPL24P83731 157 aaKnown RBP4.64□□□□□ -1.67
EXOSC3-206ENST00000489414 CIRBPQ14011 172 aaKnown RBP4.64□□□□□ -1.67
EXOSC3-206ENST00000489414 LYRM7Q5U5X0 104 aa4.64□□□□□ -1.67
EXOSC3-206ENST00000489414 LYPD5Q6UWN5 251 aa4.64□□□□□ -1.67
EXOSC3-206ENST00000489414 NTM-AS1Q6ZSK4 140 aa4.64□□□□□ -1.67
EXOSC3-206ENST00000489414 Q9HAA7 133 aa4.64□□□□□ -1.67
EXOSC3-206ENST00000489414 CDC42SE2Q9NRR3 84 aa4.64□□□□□ -1.67
EXOSC3-206ENST00000489414 NDUFA12Q9UI09 145 aa4.64□□□□□ -1.67
EXOSC3-206ENST00000489414 IGLV5-45A0A087WSX0 123 aa4.63□□□□□ -1.67
EXOSC3-206ENST00000489414 A0A1W2PPM0 123 aa4.63□□□□□ -1.67
EXOSC3-206ENST00000489414 IBA57-AS1B1ANH7 110 aa4.63□□□□□ -1.67
EXOSC3-206ENST00000489414 LINC00694P0DN24 101 aa4.63□□□□□ -1.67
EXOSC3-206ENST00000489414 CRYGAP11844 174 aa4.63□□□□□ -1.67
EXOSC3-206ENST00000489414 TSPEAR-AS2P59090 65 aa4.63□□□□□ -1.67
EXOSC3-206ENST00000489414 GAGE6Q13070 117 aa4.63□□□□□ -1.67
EXOSC3-206ENST00000489414 Q6ZVH6 145 aa4.63□□□□□ -1.67
EXOSC3-206ENST00000489414 FAM19A3Q7Z5A8 133 aa4.63□□□□□ -1.67
EXOSC3-206ENST00000489414 COPS9Q8WXC6 57 aa4.63□□□□□ -1.67
EXOSC3-206ENST00000489414 FAM104AQ969W3 186 aa4.63□□□□□ -1.67
EXOSC3-206ENST00000489414 CDKN2A-AS1Q9UH64 79 aa4.63□□□□□ -1.67
EXOSC3-206ENST00000489414 TRAV8-3A0A0A6YYJ7 113 aa4.62□□□□□ -1.67
EXOSC3-206ENST00000489414 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.62□□□□□ -1.67
EXOSC3-206ENST00000489414 TMEM262E9PQX1 116 aa4.62□□□□□ -1.67
EXOSC3-206ENST00000489414 CNBPP62633 177 aaKnown RBP4.62□□□□□ -1.67
EXOSC3-206ENST00000489414 PRR3P79522 188 aaKnown RBP4.62□□□□□ -1.67
EXOSC3-206ENST00000489414 MRPL23Q16540 153 aaKnown RBP4.62□□□□□ -1.67
EXOSC3-206ENST00000489414 LINC00242Q5T6M2 205 aa4.62□□□□□ -1.67
EXOSC3-206ENST00000489414 SVIPQ8NHG7 77 aa4.62□□□□□ -1.67
EXOSC3-206ENST00000489414 KRTAP4-1Q9BYQ7 146 aa4.62□□□□□ -1.67
EXOSC3-206ENST00000489414 PSORS1C2Q9UIG4 136 aa4.62□□□□□ -1.67
EXOSC3-206ENST00000489414 SPCS1Q9Y6A9 102 aa4.62□□□□□ -1.67
EXOSC3-206ENST00000489414 ICOSQ9Y6W8 199 aa4.62□□□□□ -1.67
EXOSC3-206ENST00000489414 A0A0J9YXY3 114 aa4.61□□□□□ -1.67
EXOSC3-206ENST00000489414 A0A1B0GWB2 263 aa4.61□□□□□ -1.67
EXOSC3-206ENST00000489414 K7EP34 96 aa4.61□□□□□ -1.67
EXOSC3-206ENST00000489414 K7ERJ3 54 aa4.61□□□□□ -1.67
EXOSC3-206ENST00000489414 NDUFA1O15239 70 aa4.61□□□□□ -1.67
EXOSC3-206ENST00000489414 CCL25O15444 150 aa4.61□□□□□ -1.67
EXOSC3-206ENST00000489414 TIMM17BO60830 172 aa4.61□□□□□ -1.67
EXOSC3-206ENST00000489414 APOMO95445 188 aa4.61□□□□□ -1.67
EXOSC3-206ENST00000489414 IGHV3-30P01768 117 aa4.61□□□□□ -1.67
EXOSC3-206ENST00000489414 IGHV3-30-5P0DP03 117 aa4.61□□□□□ -1.67
EXOSC3-206ENST00000489414 HERV-K104P63124 156 aa4.61□□□□□ -1.67
EXOSC3-206ENST00000489414 SS18Q15532 418 aa4.61□□□□□ -1.67
EXOSC3-206ENST00000489414 SFTA2Q6UW10 78 aa4.61□□□□□ -1.67
EXOSC3-206ENST00000489414 IGKV3OR2-268A0A0C4DH90 116 aa4.6□□□□□ -1.67
EXOSC3-206ENST00000489414 IGLV5-39A0A0G2JS06 123 aa4.6□□□□□ -1.67
EXOSC3-206ENST00000489414 A0A1B0GUV1 79 aa4.6□□□□□ -1.67
EXOSC3-206ENST00000489414 PRSS2P07478 247 aa4.6□□□□□ -1.67
EXOSC3-206ENST00000489414 CHTF8P0CG12 524 aa4.6□□□□□ -1.67
EXOSC3-206ENST00000489414 IFITM1P13164 125 aa4.6□□□□□ -1.67
EXOSC3-206ENST00000489414 MIAQ16674 131 aa4.6□□□□□ -1.67
EXOSC3-206ENST00000489414 NAA38Q9BRA0 125 aaKnown RBP4.6□□□□□ -1.67
EXOSC3-206ENST00000489414 SPANXDQ9BXN6 97 aa4.6□□□□□ -1.67
EXOSC3-206ENST00000489414 SPANXCQ9NY87 97 aa4.6□□□□□ -1.67
EXOSC3-206ENST00000489414 PRO1854Q9UHT4 67 aa4.6□□□□□ -1.67
EXOSC3-206ENST00000489414 SMIM1B2RUZ4 78 aa4.59□□□□□ -1.67
EXOSC3-206ENST00000489414 KRTAP4-16G5E9R7 235 aaPredicted RBP4.59□□□□□ -1.67
EXOSC3-206ENST00000489414 COX6A2Q02221 97 aa4.59□□□□□ -1.67
EXOSC3-206ENST00000489414 KRTAP19-2Q3LHN2 52 aa4.59□□□□□ -1.67
EXOSC3-206ENST00000489414 MEIG1Q5JSS6 88 aa4.59□□□□□ -1.67
EXOSC3-206ENST00000489414 MUSTN1Q8IVN3 82 aa4.59□□□□□ -1.67
EXOSC3-206ENST00000489414 IGLV4-60A0A075B6I1 120 aa4.58□□□□□ -1.68
EXOSC3-206ENST00000489414 A0A0B4J2C4 111 aa4.58□□□□□ -1.68
EXOSC3-206ENST00000489414 LOC107984156A0A0G2JMH3 177 aa4.58□□□□□ -1.68
EXOSC3-206ENST00000489414 LINC00959A0A1B0GUT2 108 aa4.58□□□□□ -1.68
EXOSC3-206ENST00000489414 A4D1N5 150 aa4.58□□□□□ -1.68
EXOSC3-206ENST00000489414 RBX1P62877 108 aa4.58□□□□□ -1.68
EXOSC3-206ENST00000489414 Q1RN00 199 aa4.58□□□□□ -1.68
EXOSC3-206ENST00000489414 ARL17AQ8IVW1 177 aa4.58□□□□□ -1.68
EXOSC3-206ENST00000489414 COX7B2Q8TF08 81 aa4.58□□□□□ -1.68
EXOSC3-206ENST00000489414 ERG28Q9UKR5 140 aa4.58□□□□□ -1.68
EXOSC3-206ENST00000489414 TRBV20-1A0A075B6N2 111 aa4.57□□□□□ -1.68
EXOSC3-206ENST00000489414 A0A087WZ39 114 aa4.57□□□□□ -1.68
EXOSC3-206ENST00000489414 ANGP03950 147 aaKnown RBP4.57□□□□□ -1.68
EXOSC3-206ENST00000489414 CFC1P0CG37 223 aa4.57□□□□□ -1.68
EXOSC3-206ENST00000489414 SCGB1C2P0DMR2 95 aa4.57□□□□□ -1.68
EXOSC3-206ENST00000489414 PSMB2P49721 201 aa4.57□□□□□ -1.68
EXOSC3-206ENST00000489414 LINC01561Q8N1V8 128 aa4.57□□□□□ -1.68
EXOSC3-206ENST00000489414 CDIP1Q9H305 208 aa4.57□□□□□ -1.68
EXOSC3-206ENST00000489414 TOMM7Q9P0U1 55 aa4.57□□□□□ -1.68
EXOSC3-206ENST00000489414 IGHV3OR16-9A0A0B4J2B5 98 aa4.56□□□□□ -1.68
EXOSC3-206ENST00000489414 F8W1H4 67 aa4.56□□□□□ -1.68
EXOSC3-206ENST00000489414 TSPAN13O95857 204 aa4.56□□□□□ -1.68
EXOSC3-206ENST00000489414 COX6CP09669 75 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms