RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 DNAH9Q9NYC9 4486 aa-0.99□□□□□ -2.57
CCDC66-221ENST00000487739 KIAA1109Q2LD37 5005 aa-0.99□□□□□ -2.57
CCDC66-221ENST00000487739 COX6CP09669 75 aa-0.99□□□□□ -2.57
CCDC66-221ENST00000487739 PRO1854Q9UHT4 67 aa-0.99□□□□□ -2.57
CCDC66-221ENST00000487739 KNL1Q8NG31 2342 aa-0.99□□□□□ -2.57
CCDC66-221ENST00000487739 LAMA3Q16787 3333 aa-0.99□□□□□ -2.57
CCDC66-221ENST00000487739 CICQ96RK0 1608 aaPredicted RBP-1□□□□□ -2.57
CCDC66-221ENST00000487739 TRAV30A0A087WSZ9 112 aa-1□□□□□ -2.57
CCDC66-221ENST00000487739 A0A1B0GU69 56 aa-1□□□□□ -2.57
CCDC66-221ENST00000487739 DEFA5Q01523 94 aa-1□□□□□ -2.57
CCDC66-221ENST00000487739 C12orf57Q99622 126 aa-1□□□□□ -2.57
CCDC66-221ENST00000487739 MRPL34Q9BQ48 92 aaKnown RBP-1□□□□□ -2.57
CCDC66-221ENST00000487739 WDR87Q6ZQQ6 2873 aa-1□□□□□ -2.57
CCDC66-221ENST00000487739 NAP1L6A6NFF2 107 aa-1.01□□□□□ -2.57
CCDC66-221ENST00000487739 MRC2Q9UBG0 1479 aa-1.01□□□□□ -2.57
CCDC66-221ENST00000487739 NRKQ7Z2Y5 1582 aa-1.01□□□□□ -2.57
CCDC66-221ENST00000487739 KNDC1Q76NI1 1749 aa-1.01□□□□□ -2.57
CCDC66-221ENST00000487739 BCORQ6W2J9 1755 aa-1.01□□□□□ -2.57
CCDC66-221ENST00000487739 ANK3Q12955 4377 aaKnown RBP-1.01□□□□□ -2.57
CCDC66-221ENST00000487739 TRIOO75962 3097 aa-1.02□□□□□ -2.57
CCDC66-221ENST00000487739 A0A087WVE0 104 aa-1.02□□□□□ -2.57
CCDC66-221ENST00000487739 SNCAP37840 140 aa-1.02□□□□□ -2.57
CCDC66-221ENST00000487739 SVBPQ8N300 66 aa-1.02□□□□□ -2.57
CCDC66-221ENST00000487739 KIAA1551Q9HCM1 1747 aa-1.02□□□□□ -2.57
CCDC66-221ENST00000487739 DNAH2Q9P225 4427 aa-1.02□□□□□ -2.57
CCDC66-221ENST00000487739 CDKN2A-AS1Q9UH64 79 aa-1.02□□□□□ -2.57
CCDC66-221ENST00000487739 NBEAQ8NFP9 2946 aa-1.02□□□□□ -2.57
CCDC66-221ENST00000487739 GCN1Q92616 2671 aaKnown RBP-1.02□□□□□ -2.57
CCDC66-221ENST00000487739 SPHKAPQ2M3C7 1700 aa-1.03□□□□□ -2.57
CCDC66-221ENST00000487739 ABCA3Q99758 1704 aa-1.03□□□□□ -2.57
CCDC66-221ENST00000487739 APOBP04114 4563 aaKnown RBP-1.03□□□□□ -2.57
CCDC66-221ENST00000487739 CCDC141Q6ZP82 1450 aa-1.03□□□□□ -2.57
CCDC66-221ENST00000487739 CRYM-AS1A6NIL9 109 aa-1.03□□□□□ -2.57
CCDC66-221ENST00000487739 HSD52Q0P140 79 aa-1.03□□□□□ -2.57
CCDC66-221ENST00000487739 RPL13AP3Q6NVV1 102 aa-1.03□□□□□ -2.57
CCDC66-221ENST00000487739 C6orf201Q7Z4U5 140 aa-1.03□□□□□ -2.57
CCDC66-221ENST00000487739 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-1.03□□□□□ -2.573e-16■■■■■ 60.7
CCDC66-221ENST00000487739 TOPAZ1Q8N9V7 1692 aa-1.04□□□□□ -2.58
CCDC66-221ENST00000487739 ARHGAP5Q13017 1502 aa-1.04□□□□□ -2.58
CCDC66-221ENST00000487739 ANKRD50Q9ULJ7 1429 aa-1.04□□□□□ -2.58
CCDC66-221ENST00000487739 NCOA3Q9Y6Q9 1424 aa-1.04□□□□□ -2.58
CCDC66-221ENST00000487739 TEX15Q9BXT5 2789 aa-1.04□□□□□ -2.58
CCDC66-221ENST00000487739 A0A1B0GV90 55 aa-1.04□□□□□ -2.58
CCDC66-221ENST00000487739 SAA2P0DJI9 122 aaPredicted RBP-1.04□□□□□ -2.58
CCDC66-221ENST00000487739 LINC00846Q9NV44 126 aa-1.04□□□□□ -2.58
CCDC66-221ENST00000487739 HIGD1BQ9P298 99 aa-1.04□□□□□ -2.58
CCDC66-221ENST00000487739 KIF20BQ96Q89 1820 aa-1.04□□□□□ -2.58
CCDC66-221ENST00000487739 LRRC37AA6NMS7 1700 aa-1.04□□□□□ -2.58
CCDC66-221ENST00000487739 C4AP0C0L4 1744 aa-1.05□□□□□ -2.58
CCDC66-221ENST00000487739 C4BP0C0L5 1744 aa-1.05□□□□□ -2.58
CCDC66-221ENST00000487739 C9orf92A6NGG3 77 aa-1.05□□□□□ -2.58
CCDC66-221ENST00000487739 CCL22O00626 93 aa-1.05□□□□□ -2.58
CCDC66-221ENST00000487739 MT1HP80294 61 aa-1.05□□□□□ -2.58
CCDC66-221ENST00000487739 DEFB107AQ8IZN7 70 aa-1.05□□□□□ -2.58
CCDC66-221ENST00000487739 IER3IP1Q9Y5U9 82 aa-1.05□□□□□ -2.58
CCDC66-221ENST00000487739 TARBP1Q13395 1621 aaKnown RBP-1.05□□□□□ -2.58
CCDC66-221ENST00000487739 ACACAQ13085 2346 aa-1.05□□□□□ -2.58
CCDC66-221ENST00000487739 MGAM2Q2M2H8 2515 aa-1.06□□□□□ -2.58
CCDC66-221ENST00000487739 MON2Q7Z3U7 1717 aa-1.06□□□□□ -2.58
CCDC66-221ENST00000487739 DLEU1O43261 78 aa-1.06□□□□□ -2.58
CCDC66-221ENST00000487739 GNG4P50150 75 aa-1.06□□□□□ -2.58
CCDC66-221ENST00000487739 PPP3R1P63098 170 aa-1.06□□□□□ -2.58
CCDC66-221ENST00000487739 DNAH1Q9P2D7 4330 aa-1.06□□□□□ -2.58
CCDC66-221ENST00000487739 SCN11AQ9UI33 1791 aa-1.06□□□□□ -2.58
CCDC66-221ENST00000487739 COL12A1Q99715 3063 aa-1.07□□□□□ -2.58
CCDC66-221ENST00000487739 RNF213Q63HN8 5207 aa-1.07□□□□□ -2.58
CCDC66-221ENST00000487739 A0A0G2JND7 137 aa-1.07□□□□□ -2.58
CCDC66-221ENST00000487739 SPTY2D1-AS1A0A0U1RR47 76 aa-1.07□□□□□ -2.58
CCDC66-221ENST00000487739 ASIPP42127 132 aa-1.07□□□□□ -2.58
CCDC66-221ENST00000487739 CUX1P39880 1505 aa-1.07□□□□□ -2.58
CCDC66-221ENST00000487739 SHPRHQ149N8 1683 aa-1.07□□□□□ -2.58
CCDC66-221ENST00000487739 EDC4Q6P2E9 1401 aaKnown RBP-1.07□□□□□ -2.58
CCDC66-221ENST00000487739 RELNP78509 3460 aa-1.08□□□□□ -2.58
CCDC66-221ENST00000487739 DNAH11Q96DT5 4516 aa-1.08□□□□□ -2.58
CCDC66-221ENST00000487739 NBEAL2Q6ZNJ1 2754 aa-1.08□□□□□ -2.58
CCDC66-221ENST00000487739 C7orf77A4D0Y5 90 aa-1.08□□□□□ -2.58
CCDC66-221ENST00000487739 H0YAA0 97 aa-1.08□□□□□ -2.58
CCDC66-221ENST00000487739 S100A1P23297 94 aa-1.08□□□□□ -2.58
CCDC66-221ENST00000487739 GNGT1P63211 74 aa-1.08□□□□□ -2.58
CCDC66-221ENST00000487739 S4R3F8 94 aa-1.08□□□□□ -2.58
CCDC66-221ENST00000487739 PDE4DIPQ5VU43 2346 aa-1.08□□□□□ -2.58
CCDC66-221ENST00000487739 PZPP20742 1482 aa-1.08□□□□□ -2.58
CCDC66-221ENST00000487739 RYR2Q92736 4967 aa-1.08□□□□□ -2.58
CCDC66-221ENST00000487739 CCDC168Q8NDH2 2452 aa-1.08□□□□□ -2.58
CCDC66-221ENST00000487739 CLIP1P30622 1438 aa-1.08□□□□□ -2.58
CCDC66-221ENST00000487739 EIF4G3O43432 1585 aaKnown RBP-1.08□□□□□ -2.58
CCDC66-221ENST00000487739 C5P01031 1676 aa-1.09□□□□□ -2.58
CCDC66-221ENST00000487739 TRBV7-7A0A0K0K1E9 115 aa-1.09□□□□□ -2.58
CCDC66-221ENST00000487739 H0Y9P7 68 aa-1.09□□□□□ -2.58
CCDC66-221ENST00000487739 CORTO00230 105 aa-1.09□□□□□ -2.58
CCDC66-221ENST00000487739 NDUFA3O95167 84 aa-1.09□□□□□ -2.58
CCDC66-221ENST00000487739 ARMS2P0C7Q2 107 aa-1.09□□□□□ -2.58
CCDC66-221ENST00000487739 DEFB110Q30KQ9 67 aa-1.09□□□□□ -2.58
CCDC66-221ENST00000487739 ALKQ9UM73 1620 aa-1.09□□□□□ -2.58
CCDC66-221ENST00000487739 CMYA5Q8N3K9 4069 aa-1.09□□□□□ -2.58
CCDC66-221ENST00000487739 PKD1L2Q7Z442 2459 aa-1.09□□□□□ -2.58
CCDC66-221ENST00000487739 UBR3Q6ZT12 1888 aa-1.09□□□□□ -2.58
CCDC66-221ENST00000487739 UTP20O75691 2785 aaKnown RBP-1.1□□□□□ -2.59
CCDC66-221ENST00000487739 hADV29S1A0JD25 119 aa-1.1□□□□□ -2.59
CCDC66-221ENST00000487739 H3BQF6 201 aa-1.1□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms