RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 PRYO14603 147 aa7.18□□□□□ -1.26
CCDC171-208ENST00000486641 IGHV4-31P0DP07 118 aa7.18□□□□□ -1.26
CCDC171-208ENST00000486641 BBC3Q96PG8 261 aaPredicted RBP7.17□□□□□ -1.26
CCDC171-208ENST00000486641 OCR1Q9BZK8 76 aa7.17□□□□□ -1.26
CCDC171-208ENST00000486641 JMJD1CQ15652 2540 aa7.17□□□□□ -1.26
CCDC171-208ENST00000486641 IGKV4-1P06312 121 aa7.17□□□□□ -1.26
CCDC171-208ENST00000486641 FUSP35637 526 aaKnown RBP eCLIP7.17□□□□□ -1.26
CCDC171-208ENST00000486641 REG3AQ06141 175 aa7.17□□□□□ -1.26
CCDC171-208ENST00000486641 ESRGQ1W209 222 aa7.17□□□□□ -1.26
CCDC171-208ENST00000486641 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.17□□□□□ -1.26
CCDC171-208ENST00000486641 C19orf73Q9NVV2 129 aa7.17□□□□□ -1.26
CCDC171-208ENST00000486641 UTP20O75691 2785 aaKnown RBP7.17□□□□□ -1.26
CCDC171-208ENST00000486641 USP9YO00507 2555 aaPredicted RBP7.16□□□□□ -1.26
CCDC171-208ENST00000486641 ANGP03950 147 aaKnown RBP7.16□□□□□ -1.26
CCDC171-208ENST00000486641 SEC61GP60059 68 aa7.16□□□□□ -1.26
CCDC171-208ENST00000486641 DIRC1Q969H9 104 aa7.16□□□□□ -1.26
CCDC171-208ENST00000486641 MYO9AB2RTY4 2548 aa7.16□□□□□ -1.26
CCDC171-208ENST00000486641 TLN2Q9Y4G6 2542 aa7.16□□□□□ -1.26
CCDC171-208ENST00000486641 HIGD2AQ9BW72 106 aa7.16□□□□□ -1.26
CCDC171-208ENST00000486641 COX7BP24311 80 aa7.15□□□□□ -1.26
CCDC171-208ENST00000486641 CYSRT1A8MQ03 144 aa7.15□□□□□ -1.27
CCDC171-208ENST00000486641 CMC4P56277 68 aaPredicted RBP7.15□□□□□ -1.27
CCDC171-208ENST00000486641 ZNF73O43830 326 aaPredicted RBP7.14□□□□□ -1.27
CCDC171-208ENST00000486641 DAD1P61803 113 aa7.14□□□□□ -1.27
CCDC171-208ENST00000486641 SPAG11BQ08648 103 aa7.14□□□□□ -1.27
CCDC171-208ENST00000486641 PIEZO1Q92508 2521 aa7.14□□□□□ -1.27
CCDC171-208ENST00000486641 A0A0J9YWU9 116 aa7.13□□□□□ -1.27
CCDC171-208ENST00000486641 IGHV4-30-4P0DP06 118 aa7.13□□□□□ -1.27
CCDC171-208ENST00000486641 TEX15Q9BXT5 2789 aa7.13□□□□□ -1.27
CCDC171-208ENST00000486641 XAGE1AQ9HD64 81 aa7.13□□□□□ -1.27
CCDC171-208ENST00000486641 PRO0255Q9UI72 69 aa7.13□□□□□ -1.27
CCDC171-208ENST00000486641 ELOF1P60002 83 aaKnown RBP7.12□□□□□ -1.27
CCDC171-208ENST00000486641 LINC00612Q8N6U2 182 aa7.12□□□□□ -1.27
CCDC171-208ENST00000486641 USP9XQ93008 2570 aaPredicted RBP7.12□□□□□ -1.27
CCDC171-208ENST00000486641 APCP25054 2843 aa7.11□□□□□ -1.27
CCDC171-208ENST00000486641 NCOR2Q9Y618 2525 aa7.11□□□□□ -1.27
CCDC171-208ENST00000486641 ANKRD17O75179 2603 aaKnown RBP7.1□□□□□ -1.27
CCDC171-208ENST00000486641 LRCOL1A6NCL2 159 aa7.1□□□□□ -1.27
CCDC171-208ENST00000486641 CACNA1AO00555 2505 aa7.1□□□□□ -1.27
CCDC171-208ENST00000486641 KLK12Q9UKR0 248 aa7.1□□□□□ -1.27
CCDC171-208ENST00000486641 PTPN13Q12923 2485 aa7.09□□□□□ -1.27
CCDC171-208ENST00000486641 IGLV1-51P01701 117 aa7.09□□□□□ -1.27
CCDC171-208ENST00000486641 ESM1Q9NQ30 184 aa7.09□□□□□ -1.27
CCDC171-208ENST00000486641 C6orf48Q9UBA6 75 aa7.09□□□□□ -1.27
CCDC171-208ENST00000486641 NF1P21359 2839 aa7.09□□□□□ -1.27
CCDC171-208ENST00000486641 CHD8Q9HCK8 2581 aa7.09□□□□□ -1.27
CCDC171-208ENST00000486641 hDV103S1A0JD37 113 aa7.09□□□□□ -1.28
CCDC171-208ENST00000486641 C3orf84H3BNL1 204 aa7.09□□□□□ -1.28
CCDC171-208ENST00000486641 FAM30AQ9NZY2 134 aa7.09□□□□□ -1.28
CCDC171-208ENST00000486641 CELA1Q9UNI1 258 aa7.09□□□□□ -1.28
CCDC171-208ENST00000486641 POLQO75417 2590 aa7.08□□□□□ -1.28
CCDC171-208ENST00000486641 FN1P02751 2386 aaKnown RBP7.08□□□□□ -1.28
CCDC171-208ENST00000486641 FLNCQ14315 2725 aa7.08□□□□□ -1.28
CCDC171-208ENST00000486641 EPG5Q9HCE0 2579 aa7.08□□□□□ -1.28
CCDC171-208ENST00000486641 HIGD2BQ4VC39 106 aa7.07□□□□□ -1.28
CCDC171-208ENST00000486641 NBEAL2Q6ZNJ1 2754 aa7.07□□□□□ -1.28
CCDC171-208ENST00000486641 CFAP46Q8IYW2 2715 aa7.07□□□□□ -1.28
CCDC171-208ENST00000486641 GVQW2A0A096LPI5 108 aaPredicted RBP7.06□□□□□ -1.28
CCDC171-208ENST00000486641 Q6ZRP5 223 aa7.06□□□□□ -1.28
CCDC171-208ENST00000486641 SMIM29Q86T20 159 aa7.06□□□□□ -1.28
CCDC171-208ENST00000486641 PRR15Q8IV56 129 aa7.06□□□□□ -1.28
CCDC171-208ENST00000486641 LINC00528Q8N1L1 170 aa7.06□□□□□ -1.28
CCDC171-208ENST00000486641 X6R8D5 127 aa7.06□□□□□ -1.28
CCDC171-208ENST00000486641 ZNF469Q96JG9 3925 aaPredicted RBP7.05□□□□□ -1.28
CCDC171-208ENST00000486641 VPREB1P12018 145 aa7.05□□□□□ -1.28
CCDC171-208ENST00000486641 C1orf64Q8NEQ6 169 aa7.05□□□□□ -1.28
CCDC171-208ENST00000486641 Q1T7F1 81 aa7.05□□□□□ -1.28
CCDC171-208ENST00000486641 DNAJC9-AS1A6NH13 148 aa7.04□□□□□ -1.28
CCDC171-208ENST00000486641 DEFB4AO15263 64 aa7.04□□□□□ -1.28
CCDC171-208ENST00000486641 PMAIP1Q13794 54 aa7.04□□□□□ -1.28
CCDC171-208ENST00000486641 LCE6AA0A183 80 aa7.03□□□□□ -1.28
CCDC171-208ENST00000486641 DOPEY1Q5JWR5 2465 aa7.03□□□□□ -1.28
CCDC171-208ENST00000486641 M0R378 163 aa7.02□□□□□ -1.28
CCDC171-208ENST00000486641 DEFB105AQ8NG35 78 aa7.02□□□□□ -1.29
CCDC171-208ENST00000486641 GCN1Q92616 2671 aaKnown RBP7.02□□□□□ -1.29
CCDC171-208ENST00000486641 LRRK2Q5S007 2527 aa7.02□□□□□ -1.29
CCDC171-208ENST00000486641 ZFYVE26Q68DK2 2539 aa7.02□□□□□ -1.29
CCDC171-208ENST00000486641 PSPHP1O15172 72 aa7.01□□□□□ -1.29
CCDC171-208ENST00000486641 Q6ZRU5 148 aa7.01□□□□□ -1.29
CCDC171-208ENST00000486641 PRR34Q9NV39 138 aa7.01□□□□□ -1.29
CCDC171-208ENST00000486641 CENPEQ02224 2701 aa7.01□□□□□ -1.29
CCDC171-208ENST00000486641 ZCCHC13Q8WW36 166 aaKnown RBP7□□□□□ -1.29
CCDC171-208ENST00000486641 SETD2Q9BYW2 2564 aaPredicted RBP7□□□□□ -1.29
CCDC171-208ENST00000486641 PKD1L2Q7Z442 2459 aa7□□□□□ -1.29
CCDC171-208ENST00000486641 NAV2Q8IVL1 2488 aa7□□□□□ -1.29
CCDC171-208ENST00000486641 Q8N377 158 aa7□□□□□ -1.29
CCDC171-208ENST00000486641 LYRM9A8MSI8 78 aa6.99□□□□□ -1.29
CCDC171-208ENST00000486641 KPRPQ5T749 579 aaPredicted RBP6.99□□□□□ -1.29
CCDC171-208ENST00000486641 TRAV22A0A0B4J277 110 aa6.99□□□□□ -1.29
CCDC171-208ENST00000486641 LELP1Q5T871 98 aa6.99□□□□□ -1.29
CCDC171-208ENST00000486641 CAMK2N2Q96S95 79 aa6.99□□□□□ -1.29
CCDC171-208ENST00000486641 IGLV5-48A0A075B6I7 105 aa6.98□□□□□ -1.29
CCDC171-208ENST00000486641 KRTAP10-9P60411 292 aa6.98□□□□□ -1.29
CCDC171-208ENST00000486641 A0A1W2PNM2 257 aa6.98□□□□□ -1.29
CCDC171-208ENST00000486641 PRR4Q16378 134 aa6.98□□□□□ -1.29
CCDC171-208ENST00000486641 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.97□□□□□ -1.29
CCDC171-208ENST00000486641 SONP18583 2426 aaKnown RBP6.97□□□□□ -1.29
CCDC171-208ENST00000486641 ETDCA0A1B0GVM5 59 aa6.96□□□□□ -1.29
CCDC171-208ENST00000486641 ACACBO00763 2458 aa6.96□□□□□ -1.3
CCDC171-208ENST00000486641 DSCR10P59022 87 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms