RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 C14orf144Q96I85 54 aa-0.64□□□□□ -2.51
GCFC2-209ENST00000486016 AP4S1Q9Y587 144 aa-0.64□□□□□ -2.51
GCFC2-209ENST00000486016 KIAA1551Q9HCM1 1747 aa-0.64□□□□□ -2.51
GCFC2-209ENST00000486016 NRXN1Q9ULB1 1477 aa-0.65□□□□□ -2.51
GCFC2-209ENST00000486016 ANKRD36A6QL64 1941 aa-0.65□□□□□ -2.51
GCFC2-209ENST00000486016 TRAV30A0A087WSZ9 112 aa-0.65□□□□□ -2.51
GCFC2-209ENST00000486016 ATOX1O00244 68 aa-0.65□□□□□ -2.51
GCFC2-209ENST00000486016 C9orf62Q8N4C0 152 aa-0.65□□□□□ -2.51
GCFC2-209ENST00000486016 CUX1P39880 1505 aa-0.65□□□□□ -2.51
GCFC2-209ENST00000486016 RAPGEF2Q9Y4G8 1499 aa-0.66□□□□□ -2.51
GCFC2-209ENST00000486016 ABCC2Q92887 1545 aa-0.66□□□□□ -2.52
GCFC2-209ENST00000486016 MON2Q7Z3U7 1717 aa-0.67□□□□□ -2.52
GCFC2-209ENST00000486016 TRBV7-7A0A0K0K1E9 115 aa-0.67□□□□□ -2.52
GCFC2-209ENST00000486016 SPTY2D1-AS1A0A0U1RR47 76 aa-0.67□□□□□ -2.52
GCFC2-209ENST00000486016 CCL22O00626 93 aa-0.67□□□□□ -2.52
GCFC2-209ENST00000486016 LELP1Q5T871 98 aa-0.67□□□□□ -2.52
GCFC2-209ENST00000486016 HEPN1Q6WQI6 88 aa-0.67□□□□□ -2.52
GCFC2-209ENST00000486016 TCEAL7Q9BRU2 100 aa-0.67□□□□□ -2.52
GCFC2-209ENST00000486016 SAMD9Q5K651 1589 aa-0.67□□□□□ -2.52
GCFC2-209ENST00000486016 SETD2Q9BYW2 2564 aaPredicted RBP-0.67□□□□□ -2.52
GCFC2-209ENST00000486016 SVEP1Q4LDE5 3571 aa-0.67□□□□□ -2.52
GCFC2-209ENST00000486016 C5P01031 1676 aa-0.68□□□□□ -2.52
GCFC2-209ENST00000486016 ATP6V1G2-DDX39BF2Z307 99 aa-0.68□□□□□ -2.52
GCFC2-209ENST00000486016 KRTAP19-8Q3LI54 63 aa-0.68□□□□□ -2.52
GCFC2-209ENST00000486016 HMGN3Q15651 99 aa-0.69□□□□□ -2.52
GCFC2-209ENST00000486016 DEFB112Q30KQ8 113 aa-0.69□□□□□ -2.52
GCFC2-209ENST00000486016 COL5A1-AS1Q5SY13 56 aa-0.69□□□□□ -2.52
GCFC2-209ENST00000486016 PSENENQ9NZ42 101 aa-0.69□□□□□ -2.52
GCFC2-209ENST00000486016 CDKN2A-AS1Q9UH64 79 aa-0.69□□□□□ -2.52
GCFC2-209ENST00000486016 PKHD1P08F94 4074 aa-0.69□□□□□ -2.52
GCFC2-209ENST00000486016 FYCO1Q9BQS8 1478 aa-0.69□□□□□ -2.52
GCFC2-209ENST00000486016 CLIP1P30622 1438 aa-0.7□□□□□ -2.52
GCFC2-209ENST00000486016 D6R8Y8 96 aa-0.7□□□□□ -2.52
GCFC2-209ENST00000486016 LINC00032P0C843 101 aa-0.7□□□□□ -2.52
GCFC2-209ENST00000486016 IGLC2P0DOY2 106 aa-0.7□□□□□ -2.52
GCFC2-209ENST00000486016 IGLC3P0DOY3 106 aa-0.7□□□□□ -2.52
GCFC2-209ENST00000486016 SPRR2EP22531 72 aa-0.7□□□□□ -2.52
GCFC2-209ENST00000486016 ETDBQ3ZM63 59 aa-0.7□□□□□ -2.52
GCFC2-209ENST00000486016 MUSTN1Q8IVN3 82 aa-0.7□□□□□ -2.52
GCFC2-209ENST00000486016 TEX14Q8IWB6 1497 aa-0.7□□□□□ -2.52
GCFC2-209ENST00000486016 CNTLNQ9NXG0 1405 aa-0.71□□□□□ -2.52
GCFC2-209ENST00000486016 FLGP20930 4061 aaPredicted RBP-0.71□□□□□ -2.52
GCFC2-209ENST00000486016 F8WEM9 126 aa-0.71□□□□□ -2.52
GCFC2-209ENST00000486016 FAUP35544 74 aaKnown RBP-0.71□□□□□ -2.52
GCFC2-209ENST00000486016 RBP2P50120 134 aa-0.71□□□□□ -2.52
GCFC2-209ENST00000486016 ALKAL2Q6UX46 152 aa-0.71□□□□□ -2.52
GCFC2-209ENST00000486016 HIGD1BQ9P298 99 aa-0.71□□□□□ -2.52
GCFC2-209ENST00000486016 COL14A1Q05707 1796 aaKnown RBP-0.72□□□□□ -2.52
GCFC2-209ENST00000486016 UQCRHLA0A096LP55 91 aa-0.72□□□□□ -2.52
GCFC2-209ENST00000486016 LEPROTL1O95214 131 aa-0.72□□□□□ -2.52
GCFC2-209ENST00000486016 ZNF720Q7Z2F6 126 aa-0.72□□□□□ -2.52
GCFC2-209ENST00000486016 WFDC13Q8IUB5 93 aa-0.72□□□□□ -2.52
GCFC2-209ENST00000486016 DPY30Q9C005 99 aa-0.72□□□□□ -2.52
GCFC2-209ENST00000486016 ACBD7Q8N6N7 88 aa-0.73□□□□□ -2.53
GCFC2-209ENST00000486016 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.73□□□□□ -2.53
GCFC2-209ENST00000486016 PEG3Q9GZU2 1588 aa-0.74□□□□□ -2.53
GCFC2-209ENST00000486016 PTPN23Q9H3S7 1636 aa-0.74□□□□□ -2.53
GCFC2-209ENST00000486016 TGP01266 2768 aa-0.74□□□□□ -2.53
GCFC2-209ENST00000486016 NCMAPQ5T1S8 102 aa-0.74□□□□□ -2.53
GCFC2-209ENST00000486016 KNL1Q8NG31 2342 aa-0.74□□□□□ -2.53
GCFC2-209ENST00000486016 KIF20BQ96Q89 1820 aa-0.74□□□□□ -2.53
GCFC2-209ENST00000486016 CREBBPQ92793 2442 aa-0.74□□□□□ -2.53
GCFC2-209ENST00000486016 ADAMTS12P58397 1594 aa-0.74□□□□□ -2.53
GCFC2-209ENST00000486016 CRYBG1Q9Y4K1 1723 aa-0.75□□□□□ -2.53
GCFC2-209ENST00000486016 BCORQ6W2J9 1755 aa-0.75□□□□□ -2.53
GCFC2-209ENST00000486016 UBE2D4Q9Y2X8 147 aa-0.75□□□□□ -2.53
GCFC2-209ENST00000486016 CLTCQ00610 1675 aaKnown RBP-0.75□□□□□ -2.53
GCFC2-209ENST00000486016 NF1P21359 2839 aa-0.75□□□□□ -2.53
GCFC2-209ENST00000486016 REV3LO60673 3130 aa-0.75□□□□□ -2.53
GCFC2-209ENST00000486016 MAGI2Q86UL8 1455 aa-0.76□□□□□ -2.53
GCFC2-209ENST00000486016 NBASA2RRP1 2371 aa-0.77□□□□□ -2.53
GCFC2-209ENST00000486016 EPRSP07814 1512 aaKnown RBP-0.77□□□□□ -2.53
GCFC2-209ENST00000486016 H0YGG7 62 aa-0.77□□□□□ -2.53
GCFC2-209ENST00000486016 PCLOQ9Y6V0 5065 aa-0.77□□□□□ -2.53
GCFC2-209ENST00000486016 KMT2CQ8NEZ4 4911 aaKnown RBP-0.77□□□□□ -2.53
GCFC2-209ENST00000486016 SPTBN4Q9H254 2564 aa-0.77□□□□□ -2.53
GCFC2-209ENST00000486016 CICQ96RK0 1608 aaPredicted RBP-0.78□□□□□ -2.53
GCFC2-209ENST00000486016 FANCAO15360 1455 aa-0.78□□□□□ -2.53
GCFC2-209ENST00000486016 COX7BP24311 80 aa-0.78□□□□□ -2.53
GCFC2-209ENST00000486016 SONP18583 2426 aaKnown RBP-0.79□□□□□ -2.54
GCFC2-209ENST00000486016 MXRA5Q9NR99 2828 aa-0.79□□□□□ -2.54
GCFC2-209ENST00000486016 M0R143 59 aa-0.79□□□□□ -2.54
GCFC2-209ENST00000486016 NMSQ5H8A3 153 aa-0.79□□□□□ -2.54
GCFC2-209ENST00000486016 RGPD2P0DJD1 1756 aa-0.79□□□□□ -2.54
GCFC2-209ENST00000486016 QSER1Q2KHR3 1735 aa-0.79□□□□□ -2.54
GCFC2-209ENST00000486016 PKD1L3Q7Z443 1732 aa-0.79□□□□□ -2.54
GCFC2-209ENST00000486016 PREX1Q8TCU6 1659 aa-0.8□□□□□ -2.54
GCFC2-209ENST00000486016 HERC1Q15751 4861 aa-0.8□□□□□ -2.54
GCFC2-209ENST00000486016 MYH4Q9Y623 1939 aa-0.8□□□□□ -2.54
GCFC2-209ENST00000486016 UBR3Q6ZT12 1888 aa-0.81□□□□□ -2.54
GCFC2-209ENST00000486016 KRTAP20-2Q3LI61 65 aa-0.81□□□□□ -2.54
GCFC2-209ENST00000486016 ATP10BO94823 1461 aa-0.81□□□□□ -2.54
GCFC2-209ENST00000486016 ABCC10Q5T3U5 1492 aa-0.81□□□□□ -2.54
GCFC2-209ENST00000486016 ALKQ9UM73 1620 aa-0.82□□□□□ -2.54
GCFC2-209ENST00000486016 AKAP13Q12802 2813 aa-0.82□□□□□ -2.54
GCFC2-209ENST00000486016 LRRC7Q96NW7 1537 aa-0.82□□□□□ -2.54
GCFC2-209ENST00000486016 HMGN2P05204 90 aaKnown RBP-0.82□□□□□ -2.54
GCFC2-209ENST00000486016 COX6B2Q6YFQ2 88 aa-0.82□□□□□ -2.54
GCFC2-209ENST00000486016 LAMA5O15230 3695 aa-0.83□□□□□ -2.54
GCFC2-209ENST00000486016 LRRC9Q6ZRR7 1453 aa-0.83□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms