RNA–Protein interactions for RNA: ENST00000484979.5

PCDH17-202, Transcript of protocadherin 17, humanhuman

TSL 1 (best)

Gene PCDH17, Length 4,471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17-202ENST00000484979 LINC00337Q8N6G1 96 aa11.05□□□□□ -0.64
PCDH17-202ENST00000484979 SMCR5Q8TEV8 140 aa11.05□□□□□ -0.64
PCDH17-202ENST00000484979 LIMD2Q9BT23 127 aa11.05□□□□□ -0.64
PCDH17-202ENST00000484979 COL4A2P08572 1712 aa11.05□□□□□ -0.64
PCDH17-202ENST00000484979 LINC01547P58512 204 aaPredicted RBP11.04□□□□□ -0.64
PCDH17-202ENST00000484979 XGP55808 180 aa11.04□□□□□ -0.64
PCDH17-202ENST00000484979 FAM30AQ9NZY2 134 aa11.03□□□□□ -0.64
PCDH17-202ENST00000484979 PTPRBP23467 1997 aa11.03□□□□□ -0.64
PCDH17-202ENST00000484979 KLK9Q2XQG4 91 aa11.02□□□□□ -0.65
PCDH17-202ENST00000484979 TRAV7A0A075B6U4 112 aa11.01□□□□□ -0.65
PCDH17-202ENST00000484979 A8MTW9 85 aa11.01□□□□□ -0.65
PCDH17-202ENST00000484979 Q8NAQ8 132 aa11.01□□□□□ -0.65
PCDH17-202ENST00000484979 WWC2-AS2Q96NR7 200 aa11□□□□□ -0.65
PCDH17-202ENST00000484979 Q6Q795 121 aa11□□□□□ -0.65
PCDH17-202ENST00000484979 Q8N3U1 123 aa11□□□□□ -0.65
PCDH17-202ENST00000484979 NBDYA0A0U1RRE5 68 aa10.99□□□□□ -0.65
PCDH17-202ENST00000484979 LINC00167Q96N53 147 aa10.99□□□□□ -0.65
PCDH17-202ENST00000484979 IGLV5-45A0A087WSX0 123 aa10.98□□□□□ -0.65
PCDH17-202ENST00000484979 C6orf48Q9UBA6 75 aa10.98□□□□□ -0.65
PCDH17-202ENST00000484979 LINC01546A6NGU7 62 aa10.96□□□□□ -0.66
PCDH17-202ENST00000484979 Q9UF83 564 aa10.95□□□□□ -0.66
PCDH17-202ENST00000484979 FAM229AH3BQW9 127 aa10.94□□□□□ -0.66
PCDH17-202ENST00000484979 A0A087WVE0 104 aa10.94□□□□□ -0.66
PCDH17-202ENST00000484979 LINC00588Q9Y4M8 146 aa10.94□□□□□ -0.66
PCDH17-202ENST00000484979 A6NED7 52 aa10.92□□□□□ -0.66
PCDH17-202ENST00000484979 TEP1Q99973 2627 aaKnown RBP10.92□□□□□ -0.66
PCDH17-202ENST00000484979 COL27A1Q8IZC6 1860 aaPredicted RBP10.92□□□□□ -0.66
PCDH17-202ENST00000484979 AKAP13Q12802 2813 aa10.91□□□□□ -0.66
PCDH17-202ENST00000484979 TRBV7-6A0A0J9YX20 115 aa10.9□□□□□ -0.66
PCDH17-202ENST00000484979 KIAA0087Q14695 138 aa10.9□□□□□ -0.66
PCDH17-202ENST00000484979 DEFB116Q30KQ4 102 aa10.9□□□□□ -0.66
PCDH17-202ENST00000484979 C16orf90A8MZG2 172 aa10.9□□□□□ -0.66
PCDH17-202ENST00000484979 CRYGAP11844 174 aa10.89□□□□□ -0.67
PCDH17-202ENST00000484979 LINC00846Q9NV44 126 aa10.89□□□□□ -0.67
PCDH17-202ENST00000484979 RTL8CO15255 209 aa10.88□□□□□ -0.67
PCDH17-202ENST00000484979 Q6ZRP5 223 aa10.88□□□□□ -0.67
PCDH17-202ENST00000484979 DNAH10OSP0CZ25 163 aa10.88□□□□□ -0.67
PCDH17-202ENST00000484979 MOBPQ13875 183 aa10.87□□□□□ -0.67
PCDH17-202ENST00000484979 SPACA4Q8TDM5 124 aa10.87□□□□□ -0.67
PCDH17-202ENST00000484979 A0A096LNT2 108 aa10.86□□□□□ -0.67
PCDH17-202ENST00000484979 HCG22E2RYF7 251 aa10.86□□□□□ -0.67
PCDH17-202ENST00000484979 A0A0C4DFX4 3053 aa10.85□□□□□ -0.67
PCDH17-202ENST00000484979 A0A1B0GW54 56 aa10.85□□□□□ -0.67
PCDH17-202ENST00000484979 H0Y9P7 68 aa10.85□□□□□ -0.67
PCDH17-202ENST00000484979 PCOTHQ58A44 107 aa10.85□□□□□ -0.67
PCDH17-202ENST00000484979 SMIM26A0A096LP01 95 aa10.85□□□□□ -0.67
PCDH17-202ENST00000484979 GVQW2A0A096LPI5 108 aaPredicted RBP10.85□□□□□ -0.67
PCDH17-202ENST00000484979 CCDC179H3BU77 68 aa10.84□□□□□ -0.67
PCDH17-202ENST00000484979 RETNLBQ9BQ08 111 aa10.84□□□□□ -0.67
PCDH17-202ENST00000484979 PCSK5Q92824 1860 aa10.83□□□□□ -0.68
PCDH17-202ENST00000484979 TRBV7-7A0A0K0K1E9 115 aa10.83□□□□□ -0.68
PCDH17-202ENST00000484979 PHF5AQ7RTV0 110 aaKnown RBP10.83□□□□□ -0.68
PCDH17-202ENST00000484979 CXCL6P80162 114 aa10.82□□□□□ -0.68
PCDH17-202ENST00000484979 K7EIL1 84 aa10.82□□□□□ -0.68
PCDH17-202ENST00000484979 Q6ZRX8 168 aa10.82□□□□□ -0.68
PCDH17-202ENST00000484979 SPATA3Q8NHX4 192 aa10.82□□□□□ -0.68
PCDH17-202ENST00000484979 SOSTDC1Q6X4U4 206 aa10.81□□□□□ -0.68
PCDH17-202ENST00000484979 ELOF1P60002 83 aaKnown RBP10.81□□□□□ -0.68
PCDH17-202ENST00000484979 MKI67P46013 3256 aaKnown RBP10.81□□□□□ -0.68
PCDH17-202ENST00000484979 TMEM254Q8TBM7 123 aa10.8□□□□□ -0.68
PCDH17-202ENST00000484979 CSNK1G2-AS1Q8NCQ2 148 aa10.79□□□□□ -0.68
PCDH17-202ENST00000484979 hDV103S1A0JD37 113 aa10.78□□□□□ -0.68
PCDH17-202ENST00000484979 SPINK1P00995 79 aa10.78□□□□□ -0.68
PCDH17-202ENST00000484979 IGKV2D-30A0A075B6S6 120 aa10.78□□□□□ -0.68
PCDH17-202ENST00000484979 IGKV2-30P06310 120 aa10.78□□□□□ -0.68
PCDH17-202ENST00000484979 TYMSOSQ8TAI1 123 aa10.78□□□□□ -0.68
PCDH17-202ENST00000484979 EPM2AB3EWF7 344 aa10.77□□□□□ -0.68
PCDH17-202ENST00000484979 Q8NBF4 154 aa10.77□□□□□ -0.68
PCDH17-202ENST00000484979 C19orf73Q9NVV2 129 aa10.77□□□□□ -0.68
PCDH17-202ENST00000484979 TP53AIP1Q9HCN2 124 aa10.76□□□□□ -0.69
PCDH17-202ENST00000484979 LAMA2P24043 3122 aaKnown RBP10.76□□□□□ -0.69
PCDH17-202ENST00000484979 COL6A5A8TX70 2615 aa10.75□□□□□ -0.69
PCDH17-202ENST00000484979 BCE1O60756 84 aa10.75□□□□□ -0.69
PCDH17-202ENST00000484979 CHTF8P0CG12 524 aa10.75□□□□□ -0.69
PCDH17-202ENST00000484979 C1orf64Q8NEQ6 169 aa10.74□□□□□ -0.69
PCDH17-202ENST00000484979 TEX15Q9BXT5 2789 aa10.73□□□□□ -0.69
PCDH17-202ENST00000484979 LINC00476Q8WZB0 136 aa10.73□□□□□ -0.69
PCDH17-202ENST00000484979 A0A0U1RQV1 116 aa10.72□□□□□ -0.69
PCDH17-202ENST00000484979 PLA2G1BP04054 148 aaKnown RBP10.72□□□□□ -0.69
PCDH17-202ENST00000484979 CHD7Q9P2D1 2997 aa10.71□□□□□ -0.69
PCDH17-202ENST00000484979 KRTAP10-11P60412 298 aa10.71□□□□□ -0.69
PCDH17-202ENST00000484979 VPREB1P12018 145 aa10.7□□□□□ -0.7
PCDH17-202ENST00000484979 FAM218AQ96MZ4 157 aa10.69□□□□□ -0.7
PCDH17-202ENST00000484979 NBEAL1Q6ZS30 2694 aa10.68□□□□□ -0.7
PCDH17-202ENST00000484979 PRR34Q9NV39 138 aa10.68□□□□□ -0.7
PCDH17-202ENST00000484979 SMIM29Q86T20 159 aa10.66□□□□□ -0.7
PCDH17-202ENST00000484979 ST20-AS1Q8NBB2 130 aa10.66□□□□□ -0.7
PCDH17-202ENST00000484979 CHD6Q8TD26 2715 aa10.65□□□□□ -0.7
PCDH17-202ENST00000484979 GIG44P09565 113 aaPredicted RBP10.65□□□□□ -0.7
PCDH17-202ENST00000484979 TM2D3Q9BRN9 247 aa10.64□□□□□ -0.71
PCDH17-202ENST00000484979 LINC00313P59037 77 aa10.64□□□□□ -0.71
PCDH17-202ENST00000484979 LOC110117498A0A087WWA1 95 aa10.64□□□□□ -0.71
PCDH17-202ENST00000484979 IGLV6-57P01721 117 aa10.64□□□□□ -0.71
PCDH17-202ENST00000484979 RPL37AP61513 92 aaKnown RBP10.64□□□□□ -0.71
PCDH17-202ENST00000484979 Q6ZQT0 140 aa10.64□□□□□ -0.71
PCDH17-202ENST00000484979 LINC00612Q8N6U2 182 aa10.64□□□□□ -0.71
PCDH17-202ENST00000484979 LAMA3Q16787 3333 aa10.64□□□□□ -0.71
PCDH17-202ENST00000484979 J3QL48 77 aa10.63□□□□□ -0.71
PCDH17-202ENST00000484979 KRTAP10-3P60369 221 aa10.63□□□□□ -0.71
PCDH17-202ENST00000484979 KRTAP1-3Q8IUG1 177 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms