RNA–Protein interactions for RNA: ENST00000483418.1

NEB-212, Transcript of nebulin, humanhuman

TSL 3

Gene NEB, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-212ENST00000483418 BDP1A6H8Y1 2624 aa0.8□□□□□ -2.28
NEB-212ENST00000483418 ANKRD17O75179 2603 aaKnown RBP0.8□□□□□ -2.28
NEB-212ENST00000483418 CFAP74Q9C0B2 1584 aa0.79□□□□□ -2.28
NEB-212ENST00000483418 CPSF4LA6NMK7 179 aaKnown RBP0.79□□□□□ -2.28
NEB-212ENST00000483418 SPINK1P00995 79 aa0.79□□□□□ -2.28
NEB-212ENST00000483418 PLCE1Q9P212 2302 aa0.79□□□□□ -2.28
NEB-212ENST00000483418 PKD1L3Q7Z443 1732 aa0.78□□□□□ -2.28
NEB-212ENST00000483418 NCOA2Q15596 1464 aa0.78□□□□□ -2.28
NEB-212ENST00000483418 POLQO75417 2590 aa0.78□□□□□ -2.28
NEB-212ENST00000483418 F8P00451 2351 aa0.77□□□□□ -2.29
NEB-212ENST00000483418 RPL38P63173 70 aaKnown RBP0.77□□□□□ -2.29
NEB-212ENST00000483418 MRPL34Q9BQ48 92 aaKnown RBP0.77□□□□□ -2.29
NEB-212ENST00000483418 TPRP12270 2363 aaKnown RBP0.77□□□□□ -2.29
NEB-212ENST00000483418 USF3Q68DE3 2245 aa0.76□□□□□ -2.29
NEB-212ENST00000483418 USP32Q8NFA0 1604 aa0.76□□□□□ -2.29
NEB-212ENST00000483418 A0A087WXM4 84 aa0.76□□□□□ -2.29
NEB-212ENST00000483418 DEFB109BQ30KR1 87 aa0.76□□□□□ -2.29
NEB-212ENST00000483418 AHNAK2Q8IVF2 5795 aa0.76□□□□□ -2.29
NEB-212ENST00000483418 RGPD1P0DJD0 1748 aa0.75□□□□□ -2.29
NEB-212ENST00000483418 CACNA1EQ15878 2313 aa0.75□□□□□ -2.29
NEB-212ENST00000483418 SMIM13P0DJ93 91 aa0.75□□□□□ -2.29
NEB-212ENST00000483418 TNCP24821 2201 aa0.74□□□□□ -2.29
NEB-212ENST00000483418 CLIP1P30622 1438 aa0.74□□□□□ -2.29
NEB-212ENST00000483418 APCP25054 2843 aa0.74□□□□□ -2.29
NEB-212ENST00000483418 IFI6P09912 130 aa0.74□□□□□ -2.29
NEB-212ENST00000483418 DEFB105AQ8NG35 78 aa0.74□□□□□ -2.29
NEB-212ENST00000483418 ANKRD36A6QL64 1941 aa0.74□□□□□ -2.29
NEB-212ENST00000483418 PIEZO1Q92508 2521 aa0.73□□□□□ -2.29
NEB-212ENST00000483418 PPRC1Q5VV67 1664 aaKnown RBP0.73□□□□□ -2.29
NEB-212ENST00000483418 UMAD1C9J7I0 102 aa0.73□□□□□ -2.29
NEB-212ENST00000483418 CCL22O00626 93 aa0.73□□□□□ -2.29
NEB-212ENST00000483418 IFI27P40305 119 aaPredicted RBP0.73□□□□□ -2.29
NEB-212ENST00000483418 FXYD6Q9H0Q3 95 aa0.73□□□□□ -2.29
NEB-212ENST00000483418 SMCO4Q9NRQ5 59 aa0.73□□□□□ -2.29
NEB-212ENST00000483418 PTPN23Q9H3S7 1636 aa0.73□□□□□ -2.29
NEB-212ENST00000483418 CEP170BQ9Y4F5 1589 aaPredicted RBP0.73□□□□□ -2.29
NEB-212ENST00000483418 RGPD2P0DJD1 1756 aa0.73□□□□□ -2.29
NEB-212ENST00000483418 URB1O60287 2271 aaKnown RBP0.72□□□□□ -2.29
NEB-212ENST00000483418 DOPEY2Q9Y3R5 2298 aa0.72□□□□□ -2.29
NEB-212ENST00000483418 PIK3C2BO00750 1634 aa0.72□□□□□ -2.29
NEB-212ENST00000483418 ANK2Q01484 3957 aa0.72□□□□□ -2.29
NEB-212ENST00000483418 APLNQ9ULZ1 77 aa0.72□□□□□ -2.29
NEB-212ENST00000483418 TENM3Q9P273 2699 aa0.72□□□□□ -2.29
NEB-212ENST00000483418 KIF20BQ96Q89 1820 aa0.72□□□□□ -2.29
NEB-212ENST00000483418 MAGI3Q5TCQ9 1506 aa0.71□□□□□ -2.3
NEB-212ENST00000483418 FMN2Q9NZ56 1722 aa0.71□□□□□ -2.3
NEB-212ENST00000483418 ABCA8O94911 1581 aa0.7□□□□□ -2.3
NEB-212ENST00000483418 CELSR2Q9HCU4 2923 aa0.7□□□□□ -2.3
NEB-212ENST00000483418 SPINK4O60575 86 aa0.7□□□□□ -2.3
NEB-212ENST00000483418 U3KQA8 63 aa0.7□□□□□ -2.3
NEB-212ENST00000483418 PTPRZ1P23471 2315 aaPredicted RBP0.69□□□□□ -2.3
NEB-212ENST00000483418 QSER1Q2KHR3 1735 aa0.69□□□□□ -2.3
NEB-212ENST00000483418 PTPRQQ9UMZ3 2332 aa0.69□□□□□ -2.3
NEB-212ENST00000483418 CCDC88BA6NC98 1476 aa0.68□□□□□ -2.3
NEB-212ENST00000483418 PDCD5O14737 125 aa0.68□□□□□ -2.3
NEB-212ENST00000483418 NREPQ16612 68 aa0.68□□□□□ -2.3
NEB-212ENST00000483418 KLK9Q2XQG4 91 aa0.68□□□□□ -2.3
NEB-212ENST00000483418 ZNF831Q5JPB2 1677 aa0.68□□□□□ -2.3
NEB-212ENST00000483418 UBR3Q6ZT12 1888 aa0.67□□□□□ -2.3
NEB-212ENST00000483418 DEFA5Q01523 94 aa0.67□□□□□ -2.3
NEB-212ENST00000483418 H1FX-AS1Q4G0G2 97 aa0.67□□□□□ -2.3
NEB-212ENST00000483418 CHD9Q3L8U1 2897 aa0.66□□□□□ -2.3
NEB-212ENST00000483418 SPTBN1Q01082 2364 aaKnown RBP0.66□□□□□ -2.3
NEB-212ENST00000483418 LCE6AA0A183 80 aa0.66□□□□□ -2.3
NEB-212ENST00000483418 KRTAP21-1Q3LI58 79 aa0.66□□□□□ -2.3
NEB-212ENST00000483418 PIEZO2Q9H5I5 2752 aa0.66□□□□□ -2.3
NEB-212ENST00000483418 HEPN1Q6WQI6 88 aa0.65□□□□□ -2.31
NEB-212ENST00000483418 TSC2P49815 1807 aa0.65□□□□□ -2.31
NEB-212ENST00000483418 CD163L1Q9NR16 1453 aa0.65□□□□□ -2.31
NEB-212ENST00000483418 UGGT2Q9NYU1 1516 aa0.64□□□□□ -2.31
NEB-212ENST00000483418 POLR1AO95602 1720 aaPredicted RBP0.64□□□□□ -2.31
NEB-212ENST00000483418 AKAP6Q13023 2319 aa0.64□□□□□ -2.31
NEB-212ENST00000483418 HMGA1P17096 107 aaKnown RBP0.64□□□□□ -2.31
NEB-212ENST00000483418 COX6B2Q6YFQ2 88 aa0.64□□□□□ -2.31
NEB-212ENST00000483418 CDKN2A-AS1Q9UH64 79 aa0.64□□□□□ -2.31
NEB-212ENST00000483418 LTN1O94822 1766 aa0.64□□□□□ -2.31
NEB-212ENST00000483418 PKDREJQ9NTG1 2253 aa0.63□□□□□ -2.31
NEB-212ENST00000483418 RGPD8O14715 1765 aaPredicted RBP0.63□□□□□ -2.31
NEB-212ENST00000483418 RGPD5Q99666 1765 aa0.63□□□□□ -2.31
NEB-212ENST00000483418 ZNF292O60281 2723 aa0.63□□□□□ -2.31
NEB-212ENST00000483418 CSMD3Q7Z407 3707 aa0.63□□□□□ -2.31
NEB-212ENST00000483418 COL14A1Q05707 1796 aaKnown RBP0.62□□□□□ -2.31
NEB-212ENST00000483418 PREX1Q8TCU6 1659 aa0.62□□□□□ -2.31
NEB-212ENST00000483418 LELP1Q5T871 98 aa0.62□□□□□ -2.31
NEB-212ENST00000483418 DUOX2Q9NRD8 1548 aa0.62□□□□□ -2.31
NEB-212ENST00000483418 ANKRD50Q9ULJ7 1429 aa0.62□□□□□ -2.31
NEB-212ENST00000483418 H3BVH4 76 aa0.61□□□□□ -2.31
NEB-212ENST00000483418 NDUFA4O00483 81 aa0.61□□□□□ -2.31
NEB-212ENST00000483418 DOT1LQ8TEK3 1739 aa0.61□□□□□ -2.31
NEB-212ENST00000483418 LRRIQ1Q96JM4 1722 aa0.61□□□□□ -2.31
NEB-212ENST00000483418 BCORQ6W2J9 1755 aa0.6□□□□□ -2.31
NEB-212ENST00000483418 NWD1Q149M9 1564 aa0.6□□□□□ -2.31
NEB-212ENST00000483418 ARFGEF2Q9Y6D5 1785 aa0.6□□□□□ -2.31
NEB-212ENST00000483418 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.59□□□□□ -2.32
NEB-212ENST00000483418 IQGAP3Q86VI3 1631 aa0.58□□□□□ -2.32
NEB-212ENST00000483418 NDUFA3O95167 84 aa0.57□□□□□ -2.32
NEB-212ENST00000483418 WFDC13Q8IUB5 93 aa0.57□□□□□ -2.32
NEB-212ENST00000483418 MYO5CQ9NQX4 1742 aa0.57□□□□□ -2.32
NEB-212ENST00000483418 GVINP1Q7Z2Y8 2422 aa0.57□□□□□ -2.32
NEB-212ENST00000483418 LMTK2Q8IWU2 1503 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms