RNA–Protein interactions for RNA: ENST00000483418.1

NEB-212, Transcript of nebulin, humanhuman

TSL 3

Gene NEB, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-212ENST00000483418 AEBP2Q6ZN18 517 aaPredicted RBP24.21■■□□□ 1.47
NEB-212ENST00000483418 CHIC1Q5VXU3 224 aa22.96■■□□□ 1.27
NEB-212ENST00000483418 SENP3Q9H4L4 574 aaPredicted RBP20.47■□□□□ 0.87
NEB-212ENST00000483418 PHF23Q9BUL5 403 aaPredicted RBP20.25■□□□□ 0.83
NEB-212ENST00000483418 FOXD1Q16676 465 aa19.17■□□□□ 0.66
NEB-212ENST00000483418 PLPPR3Q6T4P5 718 aa18.47■□□□□ 0.55
NEB-212ENST00000483418 PPP6R1Q9UPN7 881 aa18.02■□□□□ 0.48
NEB-212ENST00000483418 ADRA2BP18089 450 aa17.89■□□□□ 0.45
NEB-212ENST00000483418 PIAS4Q8N2W9 510 aaPredicted RBP17.82■□□□□ 0.44
NEB-212ENST00000483418 MSH5O43196 834 aa17.79■□□□□ 0.44
NEB-212ENST00000483418 POTEDQ86YR6 584 aa17.36■□□□□ 0.37
NEB-212ENST00000483418 MAPK8IP2Q13387 824 aaPredicted RBP16.43■□□□□ 0.22
NEB-212ENST00000483418 DMRT2Q9Y5R5 561 aa16.31■□□□□ 0.2
NEB-212ENST00000483418 PPP4R3CPQ6ZMV5 832 aa16.29■□□□□ 0.2
NEB-212ENST00000483418 SCAF1Q9H7N4 1312 aaKnown RBP16.19■□□□□ 0.18
NEB-212ENST00000483418 CNKSR2Q8WXI2 1034 aa15.84■□□□□ 0.13
NEB-212ENST00000483418 HOXD11P31277 338 aaPredicted RBP15.76■□□□□ 0.11
NEB-212ENST00000483418 NCBP3Q53F19 620 aaKnown RBP15.74■□□□□ 0.11
NEB-212ENST00000483418 KCNA4P22459 653 aa15.73■□□□□ 0.11
NEB-212ENST00000483418 RNF216Q9NWF9 866 aaPredicted RBP15.6■□□□□ 0.09
NEB-212ENST00000483418 NPM3O75607 178 aaKnown RBP15.59■□□□□ 0.09
NEB-212ENST00000483418 DCAF8L1A6NGE4 600 aa15.42■□□□□ 0.06
NEB-212ENST00000483418 RNF39Q9H2S5 420 aa15.29■□□□□ 0.04
NEB-212ENST00000483418 DNAJC5BQ9UF47 199 aa15.19■□□□□ 0.02
NEB-212ENST00000483418 CACNB1Q02641 598 aaPredicted RBP15.18■□□□□ 0.02
NEB-212ENST00000483418 C1QBPQ07021 282 aaKnown RBP14.99□□□□□ -0.01
NEB-212ENST00000483418 SLC4A1APQ9BWU0 796 aaKnown RBP14.91□□□□□ -0.02
NEB-212ENST00000483418 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.84□□□□□ -0.03
NEB-212ENST00000483418 SLC4A2P04920 1241 aa14.79□□□□□ -0.04
NEB-212ENST00000483418 U3KPZ7 1027 aaPredicted RBP14.71□□□□□ -0.05
NEB-212ENST00000483418 ZBTB22O15209 634 aa14.5□□□□□ -0.09
NEB-212ENST00000483418 FOXD4L1Q9NU39 408 aa14.49□□□□□ -0.09
NEB-212ENST00000483418 SPINK5Q9NQ38 1064 aaPredicted RBP14.45□□□□□ -0.1
NEB-212ENST00000483418 MYCNP04198 464 aaPredicted RBP14.37□□□□□ -0.11
NEB-212ENST00000483418 DSG3P32926 999 aa14.32□□□□□ -0.12
NEB-212ENST00000483418 EHMT2Q96KQ7 1210 aa14.31□□□□□ -0.12
NEB-212ENST00000483418 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.27□□□□□ -0.13
NEB-212ENST00000483418 CAPN15O75808 1086 aa14.27□□□□□ -0.13
NEB-212ENST00000483418 HNRNPUL2Q1KMD3 747 aaKnown RBP14.27□□□□□ -0.13
NEB-212ENST00000483418 SAMD1Q6SPF0 538 aaPredicted RBP14.24□□□□□ -0.13
NEB-212ENST00000483418 CSRNP3Q8WYN3 585 aa14.23□□□□□ -0.13
NEB-212ENST00000483418 APLP2Q06481 763 aa14.14□□□□□ -0.15
NEB-212ENST00000483418 TRHP20396 242 aaPredicted RBP14.1□□□□□ -0.15
NEB-212ENST00000483418 ATF5Q9Y2D1 282 aaPredicted RBP14.08□□□□□ -0.16
NEB-212ENST00000483418 ZNF219Q9P2Y4 722 aaPredicted RBP14.06□□□□□ -0.16
NEB-212ENST00000483418 ABCB7O75027 752 aa14.02□□□□□ -0.17
NEB-212ENST00000483418 ATXN8OSP0DMR3 200 aa13.95□□□□□ -0.18
NEB-212ENST00000483418 POLA2Q14181 598 aa13.82□□□□□ -0.2
NEB-212ENST00000483418 POTEHQ6S545 545 aa13.56□□□□□ -0.24
NEB-212ENST00000483418 RBM42Q9BTD8 480 aaKnown RBP13.53□□□□□ -0.24
NEB-212ENST00000483418 ZBTB12Q9Y330 459 aaPredicted RBP13.51□□□□□ -0.25
NEB-212ENST00000483418 MKRN4PQ13434 485 aaPredicted RBP13.44□□□□□ -0.26
NEB-212ENST00000483418 FBLN2P98095 1184 aa13.4□□□□□ -0.26
NEB-212ENST00000483418 OSCARQ8IYS5 282 aa13.38□□□□□ -0.27
NEB-212ENST00000483418 CHRDL2Q6WN34 429 aa13.29□□□□□ -0.28
NEB-212ENST00000483418 AKT1S1Q96B36 256 aa13.29□□□□□ -0.28
NEB-212ENST00000483418 REM2Q8IYK8 340 aaPredicted RBP13.2□□□□□ -0.3
NEB-212ENST00000483418 SPDYE2BA6NHP3 402 aa13.16□□□□□ -0.3
NEB-212ENST00000483418 SPDYE6P0CI01 402 aa13.16□□□□□ -0.3
NEB-212ENST00000483418 SPDYE2Q495Y8 402 aa13.16□□□□□ -0.3
NEB-212ENST00000483418 ZNF692Q9BU19 519 aaPredicted RBP13.1□□□□□ -0.31
NEB-212ENST00000483418 PITPNM1O00562 1244 aa13.08□□□□□ -0.32
NEB-212ENST00000483418 SSUH2Q9Y2M2 353 aa13.07□□□□□ -0.32
NEB-212ENST00000483418 PIP4P2Q8N4L2 257 aa13.02□□□□□ -0.33
NEB-212ENST00000483418 SPDYE4A6NLX3 237 aa13.01□□□□□ -0.33
NEB-212ENST00000483418 FXR2P51116 673 aaKnown RBP eCLIP12.97□□□□□ -0.33
NEB-212ENST00000483418 PABPN1Q86U42 306 aaKnown RBP eCLIP12.94□□□□□ -0.34
NEB-212ENST00000483418 FKBP8Q14318 412 aa12.86□□□□□ -0.35
NEB-212ENST00000483418 SPDYE1Q8NFV5 336 aaPredicted RBP12.82□□□□□ -0.36
NEB-212ENST00000483418 CLEC11AQ9Y240 323 aa12.81□□□□□ -0.36
NEB-212ENST00000483418 PROM2Q8N271 834 aa12.76□□□□□ -0.37
NEB-212ENST00000483418 SP7Q8TDD2 431 aaPredicted RBP12.74□□□□□ -0.37
NEB-212ENST00000483418 EVX2Q03828 476 aa12.7□□□□□ -0.38
NEB-212ENST00000483418 PRKAR2AP13861 404 aaKnown RBP12.67□□□□□ -0.38
NEB-212ENST00000483418 PRR29P0C7W0 189 aa12.64□□□□□ -0.39
NEB-212ENST00000483418 HAX1O00165 279 aa12.63□□□□□ -0.39
NEB-212ENST00000483418 STAG3Q9UJ98 1225 aa12.61□□□□□ -0.39
NEB-212ENST00000483418 CHADLQ6NUI6 762 aa12.58□□□□□ -0.4
NEB-212ENST00000483418 C19orf67A6NJJ6 358 aa12.56□□□□□ -0.4
NEB-212ENST00000483418 CREBZFQ9NS37 354 aa12.47□□□□□ -0.41
NEB-212ENST00000483418 FARP1Q9Y4F1 1045 aaPredicted RBP12.4□□□□□ -0.42
NEB-212ENST00000483418 FBXO3Q9UK99 471 aa12.37□□□□□ -0.43
NEB-212ENST00000483418 MIER1Q8N108 512 aa12.34□□□□□ -0.43
NEB-212ENST00000483418 MNX1P50219 401 aaPredicted RBP12.33□□□□□ -0.44
NEB-212ENST00000483418 GABBR2O75899 941 aa12.31□□□□□ -0.44
NEB-212ENST00000483418 PLCD3Q8N3E9 789 aa12.3□□□□□ -0.44
NEB-212ENST00000483418 VASPP50552 380 aaPredicted RBP12.28□□□□□ -0.44
NEB-212ENST00000483418 CD44P16070 742 aaKnown RBP12.27□□□□□ -0.45
NEB-212ENST00000483418 PLEKHG5O94827 1062 aa12.23□□□□□ -0.45
NEB-212ENST00000483418 NPM1P06748 294 aaKnown RBP eCLIP12.19□□□□□ -0.46
NEB-212ENST00000483418 POTEIP0CG38 1075 aa12.17□□□□□ -0.46
NEB-212ENST00000483418 ZNF579Q8NAF0 562 aaKnown RBP12.16□□□□□ -0.46
NEB-212ENST00000483418 IFNLR1Q8IU57 520 aaPredicted RBP12.12□□□□□ -0.47
NEB-212ENST00000483418 ZBTB47Q9UFB7 747 aaPredicted RBP12.11□□□□□ -0.47
NEB-212ENST00000483418 KLHL34Q8N239 644 aa12.09□□□□□ -0.47
NEB-212ENST00000483418 ZRANB1Q9UGI0 708 aa12.09□□□□□ -0.47
NEB-212ENST00000483418 RASEFQ8IZ41 740 aa12.08□□□□□ -0.48
NEB-212ENST00000483418 NUBP1P53384 320 aa12.07□□□□□ -0.48
NEB-212ENST00000483418 CLCN6P51797 869 aa12.05□□□□□ -0.48
NEB-212ENST00000483418 TSPYL2Q9H2G4 693 aaPredicted RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms