RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 RALGAPBQ86X10 1494 aa0.9□□□□□ -2.27
LAPTM4A-202ENST00000483117 ARFGEF2Q9Y6D5 1785 aa0.9□□□□□ -2.27
LAPTM4A-202ENST00000483117 USP32Q8NFA0 1604 aa0.89□□□□□ -2.27
LAPTM4A-202ENST00000483117 MADDQ8WXG6 1647 aa0.89□□□□□ -2.27
LAPTM4A-202ENST00000483117 EIF2AK4Q9P2K8 1649 aaKnown RBP0.89□□□□□ -2.27
LAPTM4A-202ENST00000483117 NHSQ6T4R5 1651 aa0.89□□□□□ -2.27
LAPTM4A-202ENST00000483117 CFAP43Q8NDM7 1665 aa0.89□□□□□ -2.27
LAPTM4A-202ENST00000483117 CDC42BPGQ6DT37 1551 aa0.89□□□□□ -2.27
LAPTM4A-202ENST00000483117 SPTY2D1-AS1A0A0U1RR47 76 aa0.89□□□□□ -2.27
LAPTM4A-202ENST00000483117 IFI6P09912 130 aa0.89□□□□□ -2.27
LAPTM4A-202ENST00000483117 NREPQ16612 68 aa0.89□□□□□ -2.27
LAPTM4A-202ENST00000483117 SMIM5Q71RC9 77 aa0.89□□□□□ -2.27
LAPTM4A-202ENST00000483117 DEFB123Q8N688 67 aa0.89□□□□□ -2.27
LAPTM4A-202ENST00000483117 GNG13Q9P2W3 67 aa0.89□□□□□ -2.27
LAPTM4A-202ENST00000483117 ANKRD36A6QL64 1941 aa0.89□□□□□ -2.27
LAPTM4A-202ENST00000483117 PLXNB2O15031 1838 aa0.89□□□□□ -2.27
LAPTM4A-202ENST00000483117 SLIT1O75093 1534 aa0.89□□□□□ -2.27
LAPTM4A-202ENST00000483117 UNC79Q9P2D8 2635 aa0.88□□□□□ -2.27
LAPTM4A-202ENST00000483117 DNAJC13O75165 2243 aa0.88□□□□□ -2.27
LAPTM4A-202ENST00000483117 CRIPTQ9P021 101 aa0.88□□□□□ -2.27
LAPTM4A-202ENST00000483117 QSER1Q2KHR3 1735 aa0.88□□□□□ -2.27
LAPTM4A-202ENST00000483117 ABCA9Q8IUA7 1624 aa0.88□□□□□ -2.27
LAPTM4A-202ENST00000483117 THOC2Q8NI27 1593 aaKnown RBP0.87□□□□□ -2.27
LAPTM4A-202ENST00000483117 MUC16Q8WXI7 14507 aa0.87□□□□□ -2.27
LAPTM4A-202ENST00000483117 LAMC1P11047 1609 aa0.87□□□□□ -2.27
LAPTM4A-202ENST00000483117 A0A0D9SG42 100 aa0.87□□□□□ -2.27
LAPTM4A-202ENST00000483117 I3L2K1 104 aa0.87□□□□□ -2.27
LAPTM4A-202ENST00000483117 KRTAP10-4P60372 401 aaPredicted RBP0.87□□□□□ -2.27
LAPTM4A-202ENST00000483117 EEA1Q15075 1411 aa0.87□□□□□ -2.27
LAPTM4A-202ENST00000483117 CACNA1CQ13936 2221 aa0.87□□□□□ -2.27
LAPTM4A-202ENST00000483117 POLR1AO95602 1720 aaPredicted RBP0.86□□□□□ -2.27
LAPTM4A-202ENST00000483117 ITSN1Q15811 1721 aa0.86□□□□□ -2.27
LAPTM4A-202ENST00000483117 CPSF4LA6NMK7 179 aaKnown RBP0.86□□□□□ -2.27
LAPTM4A-202ENST00000483117 I3L3M4 83 aa0.86□□□□□ -2.27
LAPTM4A-202ENST00000483117 SFTA3P0C7M3 94 aa0.86□□□□□ -2.27
LAPTM4A-202ENST00000483117 HILPDAQ9Y5L2 63 aa0.86□□□□□ -2.27
LAPTM4A-202ENST00000483117 KNTC1P50748 2209 aa0.85□□□□□ -2.27
LAPTM4A-202ENST00000483117 ZDBF2Q9HCK1 2354 aa0.85□□□□□ -2.27
LAPTM4A-202ENST00000483117 CCL22O00626 93 aa0.85□□□□□ -2.27
LAPTM4A-202ENST00000483117 C3orf79P0CE67 100 aa0.85□□□□□ -2.27
LAPTM4A-202ENST00000483117 TIAM2Q8IVF5 1701 aa0.85□□□□□ -2.27
LAPTM4A-202ENST00000483117 Q8IZM0 81 aa0.85□□□□□ -2.27
LAPTM4A-202ENST00000483117 PRO0255Q9UI72 69 aa0.85□□□□□ -2.27
LAPTM4A-202ENST00000483117 NAV3Q8IVL0 2385 aa0.85□□□□□ -2.27
LAPTM4A-202ENST00000483117 BCORQ6W2J9 1755 aa0.85□□□□□ -2.27
LAPTM4A-202ENST00000483117 PREX2Q70Z35 1606 aa0.85□□□□□ -2.27
LAPTM4A-202ENST00000483117 WIZO95785 1651 aa0.84□□□□□ -2.27
LAPTM4A-202ENST00000483117 UBR3Q6ZT12 1888 aa0.84□□□□□ -2.27
LAPTM4A-202ENST00000483117 NWD1Q149M9 1564 aa0.84□□□□□ -2.27
LAPTM4A-202ENST00000483117 FXYD6-FXYD2A0A087WZ82 144 aa0.84□□□□□ -2.27
LAPTM4A-202ENST00000483117 K7EQZ3 153 aa0.84□□□□□ -2.27
LAPTM4A-202ENST00000483117 NDUFA4O00483 81 aa0.84□□□□□ -2.27
LAPTM4A-202ENST00000483117 COX6B2Q6YFQ2 88 aa0.84□□□□□ -2.27
LAPTM4A-202ENST00000483117 FAM103A1Q9BTL3 118 aaKnown RBP0.84□□□□□ -2.27
LAPTM4A-202ENST00000483117 MYO7AQ13402 2215 aa0.84□□□□□ -2.28
LAPTM4A-202ENST00000483117 PARP4Q9UKK3 1724 aaKnown RBP0.84□□□□□ -2.28
LAPTM4A-202ENST00000483117 DIP2AQ14689 1571 aa0.83□□□□□ -2.28
LAPTM4A-202ENST00000483117 MAST1Q9Y2H9 1570 aa0.83□□□□□ -2.28
LAPTM4A-202ENST00000483117 JMJD1CQ15652 2540 aa0.83□□□□□ -2.28
LAPTM4A-202ENST00000483117 HELZ2Q9BYK8 2649 aaKnown RBP0.83□□□□□ -2.28
LAPTM4A-202ENST00000483117 MRPL33O75394 65 aaKnown RBP0.83□□□□□ -2.28
LAPTM4A-202ENST00000483117 COX6B1P14854 86 aa0.83□□□□□ -2.28
LAPTM4A-202ENST00000483117 Q5VSD8 79 aa0.83□□□□□ -2.28
LAPTM4A-202ENST00000483117 UBL5Q9BZL1 73 aa0.83□□□□□ -2.28
LAPTM4A-202ENST00000483117 ZNF831Q5JPB2 1677 aa0.83□□□□□ -2.28
LAPTM4A-202ENST00000483117 ABCA10Q8WWZ4 1543 aa0.83□□□□□ -2.28
LAPTM4A-202ENST00000483117 CADP27708 2225 aa0.83□□□□□ -2.28
LAPTM4A-202ENST00000483117 PREX1Q8TCU6 1659 aa0.82□□□□□ -2.28
LAPTM4A-202ENST00000483117 FAM208BQ5VWN6 2430 aa0.82□□□□□ -2.28
LAPTM4A-202ENST00000483117 DEFB114Q30KQ6 69 aa0.82□□□□□ -2.28
LAPTM4A-202ENST00000483117 KRTAP5-10Q6L8G5 202 aa0.82□□□□□ -2.28
LAPTM4A-202ENST00000483117 ASXL3Q9C0F0 2248 aa0.82□□□□□ -2.28
LAPTM4A-202ENST00000483117 COL14A1Q05707 1796 aaKnown RBP0.82□□□□□ -2.28
LAPTM4A-202ENST00000483117 CACNA1AO00555 2505 aa0.82□□□□□ -2.28
LAPTM4A-202ENST00000483117 PLXNC1O60486 1568 aa0.82□□□□□ -2.28
LAPTM4A-202ENST00000483117 ROS1P08922 2347 aa0.82□□□□□ -2.28
LAPTM4A-202ENST00000483117 MRPL34Q9BQ48 92 aaKnown RBP0.81□□□□□ -2.28
LAPTM4A-202ENST00000483117 BIVM-ERCC5R4GMW8 1640 aa0.81□□□□□ -2.28
LAPTM4A-202ENST00000483117 COL6A6A6NMZ7 2263 aa0.81□□□□□ -2.28
LAPTM4A-202ENST00000483117 RICTORQ6R327 1708 aa0.81□□□□□ -2.28
LAPTM4A-202ENST00000483117 DOT1LQ8TEK3 1739 aa0.81□□□□□ -2.28
LAPTM4A-202ENST00000483117 CEP350Q5VT06 3117 aa0.8□□□□□ -2.28
LAPTM4A-202ENST00000483117 PKD1L2Q7Z442 2459 aa0.8□□□□□ -2.28
LAPTM4A-202ENST00000483117 ABCA6Q8N139 1617 aa0.8□□□□□ -2.28
LAPTM4A-202ENST00000483117 LINC01549A6NIU2 74 aa0.8□□□□□ -2.28
LAPTM4A-202ENST00000483117 ENHOQ6UWT2 76 aa0.8□□□□□ -2.28
LAPTM4A-202ENST00000483117 KCNQ1DNQ9H478 68 aa0.8□□□□□ -2.28
LAPTM4A-202ENST00000483117 AHCTF1Q8WYP5 2266 aa0.8□□□□□ -2.28
LAPTM4A-202ENST00000483117 ABCC6O95255 1503 aa0.79□□□□□ -2.28
LAPTM4A-202ENST00000483117 DEFB131BA0A096LNP1 70 aa0.79□□□□□ -2.28
LAPTM4A-202ENST00000483117 ANKRD17O75179 2603 aaKnown RBP0.79□□□□□ -2.28
LAPTM4A-202ENST00000483117 PRXQ9BXM0 1461 aa0.79□□□□□ -2.28
LAPTM4A-202ENST00000483117 NESP48681 1621 aa0.78□□□□□ -2.28
LAPTM4A-202ENST00000483117 ALS2Q96Q42 1657 aa0.78□□□□□ -2.28
LAPTM4A-202ENST00000483117 SERF2P84101 59 aa0.78□□□□□ -2.28
LAPTM4A-202ENST00000483117 TSC2P49815 1807 aa0.78□□□□□ -2.29
LAPTM4A-202ENST00000483117 K7EMI3 77 aa0.77□□□□□ -2.29
LAPTM4A-202ENST00000483117 PRB3Q04118 309 aaPredicted RBP0.77□□□□□ -2.29
LAPTM4A-202ENST00000483117 SYCP2Q9BX26 1530 aa0.77□□□□□ -2.29
LAPTM4A-202ENST00000483117 NRAPQ86VF7 1730 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms