RNA–Protein interactions for RNA: ENST00000479988.1

CPS1-207, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best)

Gene CPS1, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-207ENST00000479988 PRR26Q8N8Z3 221 aa4.12□□□□□ -1.75
CPS1-207ENST00000479988 REG3GQ6UW15 175 aa4.12□□□□□ -1.75
CPS1-207ENST00000479988 A0A0U1RQV1 116 aa4.11□□□□□ -1.75
CPS1-207ENST00000479988 H3BQ85 93 aa4.11□□□□□ -1.75
CPS1-207ENST00000479988 NCR3O14931 201 aa4.11□□□□□ -1.75
CPS1-207ENST00000479988 TRACP01848 142 aa4.11□□□□□ -1.75
CPS1-207ENST00000479988 ASH1LQ9NR48 2969 aaKnown RBP4.11□□□□□ -1.75
CPS1-207ENST00000479988 PLAC8L1A1L4L8 177 aa4.11□□□□□ -1.75
CPS1-207ENST00000479988 LCE6AA0A183 80 aa4.11□□□□□ -1.75
CPS1-207ENST00000479988 LINC00694P0DN24 101 aa4.11□□□□□ -1.75
CPS1-207ENST00000479988 LOC400499M0QZD8 3231 aa4.11□□□□□ -1.75
CPS1-207ENST00000479988 ATMQ13315 3056 aa4.11□□□□□ -1.75
CPS1-207ENST00000479988 KALRNO60229 2985 aa4.11□□□□□ -1.75
CPS1-207ENST00000479988 LST1O00453 97 aa4.1□□□□□ -1.75
CPS1-207ENST00000479988 C1orf137Q5JT78 98 aa4.1□□□□□ -1.75
CPS1-207ENST00000479988 NTM-AS1Q6ZSK4 140 aa4.1□□□□□ -1.75
CPS1-207ENST00000479988 Q8IZM0 81 aa4.1□□□□□ -1.75
CPS1-207ENST00000479988 APCP25054 2843 aa4.1□□□□□ -1.75
CPS1-207ENST00000479988 BAALC-AS2P0C853 105 aa4.1□□□□□ -1.75
CPS1-207ENST00000479988 DAND5Q8N907 189 aa4.1□□□□□ -1.75
CPS1-207ENST00000479988 APLNQ9ULZ1 77 aa4.1□□□□□ -1.75
CPS1-207ENST00000479988 COX17Q14061 63 aa4.1□□□□□ -1.75
CPS1-207ENST00000479988 CSNK1G2-AS1Q8NCQ2 148 aa4.1□□□□□ -1.75
CPS1-207ENST00000479988 C2orf48Q96LS8 159 aa4.1□□□□□ -1.75
CPS1-207ENST00000479988 DNAH10OSP0CZ25 163 aa4.1□□□□□ -1.75
CPS1-207ENST00000479988 IGLV4-60A0A075B6I1 120 aa4.09□□□□□ -1.76
CPS1-207ENST00000479988 ADAMTSL4-AS1Q5T5F5 129 aa4.09□□□□□ -1.76
CPS1-207ENST00000479988 STAB2Q8WWQ8 2551 aa4.08□□□□□ -1.76
CPS1-207ENST00000479988 A0A096LNI7 61 aa4.08□□□□□ -1.76
CPS1-207ENST00000479988 IGHV3OR16-9A0A0B4J2B5 98 aa4.08□□□□□ -1.76
CPS1-207ENST00000479988 A0A1B0GX51 115 aa4.08□□□□□ -1.76
CPS1-207ENST00000479988 COX7BP24311 80 aa4.08□□□□□ -1.76
CPS1-207ENST00000479988 FUSP35637 526 aaKnown RBP eCLIP4.08□□□□□ -1.76
CPS1-207ENST00000479988 LINC00612Q8N6U2 182 aa4.08□□□□□ -1.76
CPS1-207ENST00000479988 GIG44P09565 113 aaPredicted RBP4.08□□□□□ -1.76
CPS1-207ENST00000479988 ORMDL1Q9P0S3 153 aa4.08□□□□□ -1.76
CPS1-207ENST00000479988 IGKV2-28A0A075B6P5 120 aa4.07□□□□□ -1.76
CPS1-207ENST00000479988 EPM2AB3EWF7 344 aa4.07□□□□□ -1.76
CPS1-207ENST00000479988 M0R378 163 aa4.07□□□□□ -1.76
CPS1-207ENST00000479988 IGKV2D-28P01615 120 aa4.07□□□□□ -1.76
CPS1-207ENST00000479988 CLEC2BQ92478 149 aa4.07□□□□□ -1.76
CPS1-207ENST00000479988 PRO0461Q9UI25 63 aa4.07□□□□□ -1.76
CPS1-207ENST00000479988 MYO15AQ9UKN7 3530 aa4.07□□□□□ -1.76
CPS1-207ENST00000479988 TACC2O95359 2948 aa4.07□□□□□ -1.76
CPS1-207ENST00000479988 JMJD7-PLA2G4BH0Y9G9 81 aa4.07□□□□□ -1.76
CPS1-207ENST00000479988 RPL37AP61513 92 aaKnown RBP4.07□□□□□ -1.76
CPS1-207ENST00000479988 NDUFB1O75438 58 aa4.06□□□□□ -1.76
CPS1-207ENST00000479988 UNQ6190/PRO20217Q6UXQ8 127 aa4.06□□□□□ -1.76
CPS1-207ENST00000479988 DSCR8Q96T75 97 aa4.06□□□□□ -1.76
CPS1-207ENST00000479988 C9orf116Q5BN46 136 aaPredicted RBP4.06□□□□□ -1.76
CPS1-207ENST00000479988 LITAFQ99732 161 aa4.06□□□□□ -1.76
CPS1-207ENST00000479988 NDUFC2-KCTD14E9PQ53 114 aa4.06□□□□□ -1.76
CPS1-207ENST00000479988 OXTP01178 125 aa4.06□□□□□ -1.76
CPS1-207ENST00000479988 GAGE2AQ6NT46 116 aa4.06□□□□□ -1.76
CPS1-207ENST00000479988 UTP20O75691 2785 aaKnown RBP4.06□□□□□ -1.76
CPS1-207ENST00000479988 A0A087WTM6 91 aa4.05□□□□□ -1.76
CPS1-207ENST00000479988 Q6ZRP5 223 aa4.05□□□□□ -1.76
CPS1-207ENST00000479988 RPL37AP8A6NKH3 93 aa4.05□□□□□ -1.76
CPS1-207ENST00000479988 BRK1Q8WUW1 75 aa4.05□□□□□ -1.76
CPS1-207ENST00000479988 TMEM256-PLSCR3K7ERE1 68 aa4.05□□□□□ -1.76
CPS1-207ENST00000479988 UPK3BQ9BT76 320 aa4.05□□□□□ -1.76
CPS1-207ENST00000479988 HRNRQ86YZ3 2850 aaPredicted RBP4.04□□□□□ -1.76
CPS1-207ENST00000479988 LRBAP50851 2863 aa4.04□□□□□ -1.76
CPS1-207ENST00000479988 MUC3AQ02505 3323 aa4.04□□□□□ -1.76
CPS1-207ENST00000479988 PDE6GP18545 87 aa4.04□□□□□ -1.76
CPS1-207ENST00000479988 LINC00643Q86TS7 51 aa4.04□□□□□ -1.76
CPS1-207ENST00000479988 RPS28P62857 69 aaKnown RBP4.04□□□□□ -1.76
CPS1-207ENST00000479988 TEX49A0A1B0GTD5 131 aa4.03□□□□□ -1.76
CPS1-207ENST00000479988 LINC00337Q8N6G1 96 aa4.03□□□□□ -1.76
CPS1-207ENST00000479988 DHRS4-AS1Q9P1J3 65 aa4.03□□□□□ -1.76
CPS1-207ENST00000479988 PLA2G2DQ9UNK4 145 aa4.03□□□□□ -1.76
CPS1-207ENST00000479988 CCDC179H3BU77 68 aa4.03□□□□□ -1.76
CPS1-207ENST00000479988 Q6ZRU5 148 aa4.03□□□□□ -1.76
CPS1-207ENST00000479988 IMUPQ9GZP8 106 aa4.03□□□□□ -1.76
CPS1-207ENST00000479988 SMCPP49901 116 aaPredicted RBP4.03□□□□□ -1.76
CPS1-207ENST00000479988 SMIM11BQ8TCY0 68 aa4.03□□□□□ -1.76
CPS1-207ENST00000479988 Q6Q795 121 aa4.02□□□□□ -1.77
CPS1-207ENST00000479988 TRAV23DV6A0A075B6W5 121 aa4.02□□□□□ -1.77
CPS1-207ENST00000479988 LINC01600Q96MT4 127 aa4.02□□□□□ -1.77
CPS1-207ENST00000479988 UBL5Q9BZL1 73 aa4.02□□□□□ -1.77
CPS1-207ENST00000479988 SMR3BP02814 79 aaPredicted RBP4.02□□□□□ -1.77
CPS1-207ENST00000479988 FAM104AQ969W3 186 aa4.02□□□□□ -1.77
CPS1-207ENST00000479988 WDFY3Q8IZQ1 3526 aa4.02□□□□□ -1.77
CPS1-207ENST00000479988 IGLV9-49A0A0B4J1Y8 123 aa4.02□□□□□ -1.77
CPS1-207ENST00000479988 NDUFS5O43920 106 aa4.01□□□□□ -1.77
CPS1-207ENST00000479988 Q8N814 137 aa4.01□□□□□ -1.77
CPS1-207ENST00000479988 hADV29S1A0JD25 119 aa4.01□□□□□ -1.77
CPS1-207ENST00000479988 SOSTDC1Q6X4U4 206 aa4□□□□□ -1.77
CPS1-207ENST00000479988 CIRBP-AS1Q8TBR5 109 aa4□□□□□ -1.77
CPS1-207ENST00000479988 MT-ATP8P03928 68 aa4□□□□□ -1.77
CPS1-207ENST00000479988 CRYGAP11844 174 aa4□□□□□ -1.77
CPS1-207ENST00000479988 ZZEF1O43149 2961 aa4□□□□□ -1.77
CPS1-207ENST00000479988 FAM236AA0A1B0GUQ0 79 aa4□□□□□ -1.77
CPS1-207ENST00000479988 FAM236BA0A1B0GV22 79 aa4□□□□□ -1.77
CPS1-207ENST00000479988 RBM3P98179 157 aaKnown RBP3.99□□□□□ -1.77
CPS1-207ENST00000479988 SPINK6Q6UWN8 80 aa3.99□□□□□ -1.77
CPS1-207ENST00000479988 C6orf99Q4VX62 202 aa3.99□□□□□ -1.77
CPS1-207ENST00000479988 Q6ZVQ6 151 aa3.99□□□□□ -1.77
CPS1-207ENST00000479988 DMDP11532 3685 aa3.99□□□□□ -1.77
CPS1-207ENST00000479988 NIPBLQ6KC79 2804 aaeCLIP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms