RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 SEC61GP60059 68 aa10.01□□□□□ -0.81
COL20A1-206ENST00000479501 EGFEM1PQ0D2K5 195 aa10.01□□□□□ -0.81
COL20A1-206ENST00000479501 IL17DQ8TAD2 202 aa10.01□□□□□ -0.81
COL20A1-206ENST00000479501 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.01□□□□□ -0.81
COL20A1-206ENST00000479501 FRYQ5TBA9 3013 aa10□□□□□ -0.81
COL20A1-206ENST00000479501 HELZ2Q9BYK8 2649 aaKnown RBP10□□□□□ -0.81
COL20A1-206ENST00000479501 A8MTW9 85 aa10□□□□□ -0.81
COL20A1-206ENST00000479501 PRYO14603 147 aa10□□□□□ -0.81
COL20A1-206ENST00000479501 LYPD5Q6UWN5 251 aa10□□□□□ -0.81
COL20A1-206ENST00000479501 SBSPONQ8IVN8 264 aa10□□□□□ -0.81
COL20A1-206ENST00000479501 RPL37AP8A6NKH3 93 aa9.99□□□□□ -0.81
COL20A1-206ENST00000479501 CRYGAP11844 174 aa9.99□□□□□ -0.81
COL20A1-206ENST00000479501 PMAIP1Q13794 54 aa9.99□□□□□ -0.81
COL20A1-206ENST00000479501 Q6ZVQ6 151 aa9.99□□□□□ -0.81
COL20A1-206ENST00000479501 LINC01561Q8N1V8 128 aa9.99□□□□□ -0.81
COL20A1-206ENST00000479501 C6orf223Q8N319 242 aa9.99□□□□□ -0.81
COL20A1-206ENST00000479501 TMEM254Q8TBM7 123 aa9.99□□□□□ -0.81
COL20A1-206ENST00000479501 X6R8D5 127 aa9.98□□□□□ -0.81
COL20A1-206ENST00000479501 Q8N9L7 120 aa9.97□□□□□ -0.81
COL20A1-206ENST00000479501 LINC00208Q96KT6 92 aa9.97□□□□□ -0.81
COL20A1-206ENST00000479501 ATRQ13535 2644 aa9.96□□□□□ -0.82
COL20A1-206ENST00000479501 LINC01547P58512 204 aaPredicted RBP9.96□□□□□ -0.82
COL20A1-206ENST00000479501 C4orf48Q5BLP8 95 aa9.96□□□□□ -0.82
COL20A1-206ENST00000479501 CASC2Q6XLA1 102 aa9.96□□□□□ -0.82
COL20A1-206ENST00000479501 C1orf137Q5JT78 98 aa9.95□□□□□ -0.82
COL20A1-206ENST00000479501 LINC00575Q6W349 94 aa9.95□□□□□ -0.82
COL20A1-206ENST00000479501 NBEAQ8NFP9 2946 aa9.94□□□□□ -0.82
COL20A1-206ENST00000479501 RPS28P62857 69 aaKnown RBP9.94□□□□□ -0.82
COL20A1-206ENST00000479501 TRBV7-6A0A0J9YX20 115 aa9.93□□□□□ -0.82
COL20A1-206ENST00000479501 PSPHP1O15172 72 aa9.93□□□□□ -0.82
COL20A1-206ENST00000479501 PRO0628Q9UI54 55 aa9.93□□□□□ -0.82
COL20A1-206ENST00000479501 MGAM2Q2M2H8 2515 aa9.91□□□□□ -0.82
COL20A1-206ENST00000479501 COL6A3P12111 3177 aa9.91□□□□□ -0.82
COL20A1-206ENST00000479501 ZNF575Q86XF7 245 aa9.9□□□□□ -0.82
COL20A1-206ENST00000479501 FRYLO94915 3013 aa9.9□□□□□ -0.82
COL20A1-206ENST00000479501 SPEGQ15772 3267 aa9.9□□□□□ -0.82
COL20A1-206ENST00000479501 FAM218AQ96MZ4 157 aa9.9□□□□□ -0.82
COL20A1-206ENST00000479501 PRR15LQ9BU68 103 aa9.9□□□□□ -0.82
COL20A1-206ENST00000479501 SPINK6Q6UWN8 80 aa9.89□□□□□ -0.83
COL20A1-206ENST00000479501 C2orf48Q96LS8 159 aa9.89□□□□□ -0.83
COL20A1-206ENST00000479501 ESRGQ1W209 222 aa9.89□□□□□ -0.83
COL20A1-206ENST00000479501 C4orf26Q17RF5 130 aa9.88□□□□□ -0.83
COL20A1-206ENST00000479501 LITAFQ99732 161 aa9.88□□□□□ -0.83
COL20A1-206ENST00000479501 CXCL6P80162 114 aa9.87□□□□□ -0.83
COL20A1-206ENST00000479501 CSNK1G2-AS1Q8NCQ2 148 aa9.87□□□□□ -0.83
COL20A1-206ENST00000479501 REV3LO60673 3130 aa9.87□□□□□ -0.83
COL20A1-206ENST00000479501 Q6ZRU5 148 aa9.87□□□□□ -0.83
COL20A1-206ENST00000479501 BOD1L1Q8NFC6 3051 aa9.86□□□□□ -0.83
COL20A1-206ENST00000479501 M0R2N4 97 aa9.86□□□□□ -0.83
COL20A1-206ENST00000479501 KRTAP1-3Q8IUG1 177 aa9.85□□□□□ -0.83
COL20A1-206ENST00000479501 Q8NAQ8 132 aa9.85□□□□□ -0.83
COL20A1-206ENST00000479501 GIG44P09565 113 aaPredicted RBP9.84□□□□□ -0.83
COL20A1-206ENST00000479501 F8WDY8 70 aa9.84□□□□□ -0.83
COL20A1-206ENST00000479501 C19orf73Q9NVV2 129 aa9.84□□□□□ -0.83
COL20A1-206ENST00000479501 EYSQ5T1H1 3165 aa9.83□□□□□ -0.84
COL20A1-206ENST00000479501 IGSF10Q6WRI0 2623 aa9.82□□□□□ -0.84
COL20A1-206ENST00000479501 KRTAP24-1Q3LI83 254 aa9.82□□□□□ -0.84
COL20A1-206ENST00000479501 C10orf25Q5T742 122 aa9.81□□□□□ -0.84
COL20A1-206ENST00000479501 ADGRG4Q8IZF6 3080 aa9.81□□□□□ -0.84
COL20A1-206ENST00000479501 BCE1O60756 84 aa9.81□□□□□ -0.84
COL20A1-206ENST00000479501 LINC01556Q5JQF7 62 aa9.81□□□□□ -0.84
COL20A1-206ENST00000479501 SPATA3Q8NHX4 192 aa9.81□□□□□ -0.84
COL20A1-206ENST00000479501 A0A087WSZ3 146 aa9.81□□□□□ -0.84
COL20A1-206ENST00000479501 K7ERS5 55 aa9.81□□□□□ -0.84
COL20A1-206ENST00000479501 MAST4O15021 2626 aa9.81□□□□□ -0.84
COL20A1-206ENST00000479501 IGLV9-49A0A0B4J1Y8 123 aa9.8□□□□□ -0.84
COL20A1-206ENST00000479501 H3BNG1 76 aa9.8□□□□□ -0.84
COL20A1-206ENST00000479501 FREM2Q5SZK8 3169 aa9.8□□□□□ -0.84
COL20A1-206ENST00000479501 NHLRC4P0CG21 123 aaPredicted RBP9.79□□□□□ -0.84
COL20A1-206ENST00000479501 C6orf48Q9UBA6 75 aa9.79□□□□□ -0.84
COL20A1-206ENST00000479501 PLAC8L1A1L4L8 177 aa9.79□□□□□ -0.84
COL20A1-206ENST00000479501 DEFB116Q30KQ4 102 aa9.79□□□□□ -0.84
COL20A1-206ENST00000479501 CHD6Q8TD26 2715 aa9.78□□□□□ -0.84
COL20A1-206ENST00000479501 EIF4EBP3O60516 100 aaPredicted RBP9.78□□□□□ -0.84
COL20A1-206ENST00000479501 PCOTHQ58A44 107 aa9.77□□□□□ -0.84
COL20A1-206ENST00000479501 LINC00474Q9P2X8 69 aa9.77□□□□□ -0.85
COL20A1-206ENST00000479501 H0Y9P7 68 aa9.76□□□□□ -0.85
COL20A1-206ENST00000479501 ATMQ13315 3056 aa9.76□□□□□ -0.85
COL20A1-206ENST00000479501 NUPR2A6NF83 97 aa9.76□□□□□ -0.85
COL20A1-206ENST00000479501 REG3GQ6UW15 175 aa9.76□□□□□ -0.85
COL20A1-206ENST00000479501 DMXL2Q8TDJ6 3036 aa9.76□□□□□ -0.85
COL20A1-206ENST00000479501 HCG22E2RYF7 251 aa9.76□□□□□ -0.85
COL20A1-206ENST00000479501 KRTAP1-1Q07627 177 aa9.75□□□□□ -0.85
COL20A1-206ENST00000479501 SMCR5Q8TEV8 140 aa9.75□□□□□ -0.85
COL20A1-206ENST00000479501 KRTAP10-3P60369 221 aa9.75□□□□□ -0.85
COL20A1-206ENST00000479501 FLNCQ14315 2725 aa9.74□□□□□ -0.85
COL20A1-206ENST00000479501 ZNF706Q9Y5V0 76 aaPredicted RBP9.74□□□□□ -0.85
COL20A1-206ENST00000479501 TNRC18O15417 2968 aaPredicted RBP9.74□□□□□ -0.85
COL20A1-206ENST00000479501 hDV103S1A0JD37 113 aa9.74□□□□□ -0.85
COL20A1-206ENST00000479501 SMIM29Q86T20 159 aa9.74□□□□□ -0.85
COL20A1-206ENST00000479501 SPTBN5Q9NRC6 3674 aaKnown RBP9.73□□□□□ -0.85
COL20A1-206ENST00000479501 Q6ZQT0 140 aa9.72□□□□□ -0.85
COL20A1-206ENST00000479501 Q9BRP9 147 aa9.72□□□□□ -0.85
COL20A1-206ENST00000479501 KIAA0087Q14695 138 aa9.71□□□□□ -0.86
COL20A1-206ENST00000479501 TM2D3Q9BRN9 247 aa9.71□□□□□ -0.86
COL20A1-206ENST00000479501 LINC00612Q8N6U2 182 aa9.7□□□□□ -0.86
COL20A1-206ENST00000479501 LY6G6CO95867 125 aa9.7□□□□□ -0.86
COL20A1-206ENST00000479501 C7orf33Q8WU49 177 aa9.7□□□□□ -0.86
COL20A1-206ENST00000479501 IGHV6-1A0A0B4J1U7 121 aa9.7□□□□□ -0.86
COL20A1-206ENST00000479501 C22orf24Q9Y442 160 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms