RNA–Protein interactions for RNA: ENST00000478563.1

CDK13-204, Transcript of cyclin dependent kinase 13, humanhuman

TSL 4

Gene CDK13, Length 700 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-204ENST00000478563 ARFGEF2Q9Y6D5 1785 aa1.37□□□□□ -2.19
CDK13-204ENST00000478563 EFCAB5A4FU69 1503 aa1.37□□□□□ -2.19
CDK13-204ENST00000478563 TOP2AP11388 1531 aaKnown RBP1.37□□□□□ -2.19
CDK13-204ENST00000478563 ARHGEF12Q9NZN5 1544 aa1.37□□□□□ -2.19
CDK13-204ENST00000478563 H3BVH4 76 aa1.37□□□□□ -2.19
CDK13-204ENST00000478563 Q6JHZ5 121 aa1.37□□□□□ -2.19
CDK13-204ENST00000478563 CACNA1HO95180 2353 aa1.37□□□□□ -2.19
CDK13-204ENST00000478563 ABCA8O94911 1581 aa1.37□□□□□ -2.19
CDK13-204ENST00000478563 DIP2CQ9Y2E4 1556 aa1.37□□□□□ -2.19
CDK13-204ENST00000478563 KALRNO60229 2985 aa1.37□□□□□ -2.19
CDK13-204ENST00000478563 NKTRP30414 1462 aaKnown RBP1.37□□□□□ -2.19
CDK13-204ENST00000478563 RGPD2P0DJD1 1756 aa1.36□□□□□ -2.19
CDK13-204ENST00000478563 CENPFP49454 3210 aa1.36□□□□□ -2.19
CDK13-204ENST00000478563 FAM208BQ5VWN6 2430 aa1.36□□□□□ -2.19
CDK13-204ENST00000478563 A0A1B0GWA3 101 aa1.36□□□□□ -2.19
CDK13-204ENST00000478563 NUP188Q5SRE5 1749 aa1.36□□□□□ -2.19
CDK13-204ENST00000478563 TTC28Q96AY4 2481 aa1.36□□□□□ -2.19
CDK13-204ENST00000478563 HECTD1Q9ULT8 2610 aa1.36□□□□□ -2.19
CDK13-204ENST00000478563 KDM3BQ7LBC6 1761 aa1.36□□□□□ -2.19
CDK13-204ENST00000478563 LRRC9Q6ZRR7 1453 aa1.36□□□□□ -2.19
CDK13-204ENST00000478563 ABCA12Q86UK0 2595 aa1.36□□□□□ -2.19
CDK13-204ENST00000478563 PRUNE2Q8WUY3 3088 aa1.36□□□□□ -2.19
CDK13-204ENST00000478563 CLTCQ00610 1675 aaKnown RBP1.35□□□□□ -2.19
CDK13-204ENST00000478563 SCN7AQ01118 1682 aa1.35□□□□□ -2.19
CDK13-204ENST00000478563 DNAJC13O75165 2243 aa1.35□□□□□ -2.19
CDK13-204ENST00000478563 SAMD9Q5K651 1589 aa1.35□□□□□ -2.19
CDK13-204ENST00000478563 ANKRD36A6QL64 1941 aa1.35□□□□□ -2.19
CDK13-204ENST00000478563 IQCF6A8MYZ5 107 aa1.35□□□□□ -2.19
CDK13-204ENST00000478563 C3orf79P0CE67 100 aa1.35□□□□□ -2.19
CDK13-204ENST00000478563 SAA2P0DJI9 122 aaPredicted RBP1.35□□□□□ -2.19
CDK13-204ENST00000478563 COX8AP10176 69 aa1.35□□□□□ -2.19
CDK13-204ENST00000478563 COX6A2Q02221 97 aa1.35□□□□□ -2.19
CDK13-204ENST00000478563 KRTAP19-3Q7Z4W3 81 aa1.35□□□□□ -2.19
CDK13-204ENST00000478563 AHNAK2Q8IVF2 5795 aa1.35□□□□□ -2.19
CDK13-204ENST00000478563 ATP10BO94823 1461 aa1.35□□□□□ -2.19
CDK13-204ENST00000478563 NRXN1Q9ULB1 1477 aa1.35□□□□□ -2.19
CDK13-204ENST00000478563 CROCC2H7BZ55 1655 aa1.35□□□□□ -2.19
CDK13-204ENST00000478563 COL4A6Q14031 1691 aa1.35□□□□□ -2.19
CDK13-204ENST00000478563 DCHS1Q96JQ0 3298 aa1.35□□□□□ -2.19
CDK13-204ENST00000478563 ITSN1Q15811 1721 aa1.35□□□□□ -2.19
CDK13-204ENST00000478563 LAMC1P11047 1609 aa1.34□□□□□ -2.19
CDK13-204ENST00000478563 ABCA9Q8IUA7 1624 aa1.34□□□□□ -2.19
CDK13-204ENST00000478563 PTPN23Q9H3S7 1636 aa1.34□□□□□ -2.19
CDK13-204ENST00000478563 PLXNB2O15031 1838 aa1.34□□□□□ -2.19
CDK13-204ENST00000478563 CACNA1CQ13936 2221 aa1.34□□□□□ -2.19
CDK13-204ENST00000478563 BPTFQ12830 3046 aa1.34□□□□□ -2.19
CDK13-204ENST00000478563 A0A0D9SFI3 127 aa1.34□□□□□ -2.19
CDK13-204ENST00000478563 SNRPGP15A8MWD9 76 aa1.34□□□□□ -2.19
CDK13-204ENST00000478563 F8WEM9 126 aa1.34□□□□□ -2.19
CDK13-204ENST00000478563 BCE1O60756 84 aa1.34□□□□□ -2.19
CDK13-204ENST00000478563 PSMG4Q5JS54 123 aa1.34□□□□□ -2.19
CDK13-204ENST00000478563 SPRR4Q96PI1 79 aa1.34□□□□□ -2.19
CDK13-204ENST00000478563 UBR3Q6ZT12 1888 aa1.34□□□□□ -2.19
CDK13-204ENST00000478563 USP34Q70CQ2 3546 aa1.34□□□□□ -2.2
CDK13-204ENST00000478563 HTTP42858 3142 aa1.34□□□□□ -2.2
CDK13-204ENST00000478563 ABCC1P33527 1531 aa1.34□□□□□ -2.2
CDK13-204ENST00000478563 ABCC2Q92887 1545 aa1.34□□□□□ -2.2
CDK13-204ENST00000478563 TULP4Q9NRJ4 1543 aa1.34□□□□□ -2.2
CDK13-204ENST00000478563 PLXNC1O60486 1568 aa1.34□□□□□ -2.2
CDK13-204ENST00000478563 MROH2BQ7Z745 1585 aa1.34□□□□□ -2.2
CDK13-204ENST00000478563 TSC2P49815 1807 aa1.33□□□□□ -2.2
CDK13-204ENST00000478563 SPTBN4Q9H254 2564 aa1.33□□□□□ -2.2
CDK13-204ENST00000478563 TPRP12270 2363 aaKnown RBP1.33□□□□□ -2.2
CDK13-204ENST00000478563 UBR1Q8IWV7 1749 aa1.33□□□□□ -2.2
CDK13-204ENST00000478563 XRN1Q8IZH2 1706 aaKnown RBP1.33□□□□□ -2.2
CDK13-204ENST00000478563 MYMXA0A1B0GTQ4 84 aa1.33□□□□□ -2.2
CDK13-204ENST00000478563 CEBPZOSA8MTT3 80 aa1.33□□□□□ -2.2
CDK13-204ENST00000478563 H7BZZ5 65 aa1.33□□□□□ -2.2
CDK13-204ENST00000478563 LEPROTL1O95214 131 aa1.33□□□□□ -2.2
CDK13-204ENST00000478563 HMGN2P05204 90 aaKnown RBP1.33□□□□□ -2.2
CDK13-204ENST00000478563 PSENENQ9NZ42 101 aa1.33□□□□□ -2.2
CDK13-204ENST00000478563 PLAC8Q9NZF1 115 aa1.33□□□□□ -2.2
CDK13-204ENST00000478563 FBN2P35556 2912 aa1.33□□□□□ -2.2
CDK13-204ENST00000478563 SETD2Q9BYW2 2564 aaPredicted RBP1.33□□□□□ -2.2
CDK13-204ENST00000478563 REV3LO60673 3130 aa1.33□□□□□ -2.2
CDK13-204ENST00000478563 C2CD3Q4AC94 2353 aa1.33□□□□□ -2.2
CDK13-204ENST00000478563 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.32□□□□□ -2.2
CDK13-204ENST00000478563 SYCP2Q9BX26 1530 aa1.32□□□□□ -2.2
CDK13-204ENST00000478563 PRH1P02810 166 aa1.32□□□□□ -2.2
CDK13-204ENST00000478563 PLGLAQ15195 96 aa1.32□□□□□ -2.2
CDK13-204ENST00000478563 DEFB107AQ8IZN7 70 aa1.32□□□□□ -2.2
CDK13-204ENST00000478563 SPEGQ15772 3267 aa1.32□□□□□ -2.2
CDK13-204ENST00000478563 CFAP74Q9C0B2 1584 aa1.32□□□□□ -2.2
CDK13-204ENST00000478563 CLTCL1P53675 1640 aa1.32□□□□□ -2.2
CDK13-204ENST00000478563 ABCA6Q8N139 1617 aa1.32□□□□□ -2.2
CDK13-204ENST00000478563 USP32Q8NFA0 1604 aa1.32□□□□□ -2.2
CDK13-204ENST00000478563 CELSR3Q9NYQ7 3312 aa1.32□□□□□ -2.2
CDK13-204ENST00000478563 NEXMIFQ5QGS0 1516 aa1.31□□□□□ -2.2
CDK13-204ENST00000478563 ABCC8Q09428 1581 aa1.31□□□□□ -2.2
CDK13-204ENST00000478563 TIAM1Q13009 1591 aa1.31□□□□□ -2.2
CDK13-204ENST00000478563 CEP170BQ9Y4F5 1589 aaPredicted RBP1.31□□□□□ -2.2
CDK13-204ENST00000478563 DNHD1Q96M86 4753 aa1.31□□□□□ -2.2
CDK13-204ENST00000478563 MYO3AQ8NEV4 1616 aa1.31□□□□□ -2.2
CDK13-204ENST00000478563 TRBV25-1A0A075B6N4 114 aa1.31□□□□□ -2.2
CDK13-204ENST00000478563 D6R8Y8 96 aa1.31□□□□□ -2.2
CDK13-204ENST00000478563 IFI27P40305 119 aaPredicted RBP1.31□□□□□ -2.2
CDK13-204ENST00000478563 DEFB121Q5J5C9 76 aa1.31□□□□□ -2.2
CDK13-204ENST00000478563 MUSTN1Q8IVN3 82 aa1.31□□□□□ -2.2
CDK13-204ENST00000478563 TOMM5Q8N4H5 51 aa1.31□□□□□ -2.2
CDK13-204ENST00000478563 LINC01600Q96MT4 127 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms