RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 IGLV9-49A0A0B4J1Y8 123 aa9.83□□□□□ -0.84
NPHP4-208ENST00000478423 IGSF10Q6WRI0 2623 aa9.83□□□□□ -0.84
NPHP4-208ENST00000478423 SBSPONQ8IVN8 264 aa9.83□□□□□ -0.84
NPHP4-208ENST00000478423 LINC01556Q5JQF7 62 aa9.82□□□□□ -0.84
NPHP4-208ENST00000478423 J3KT08 172 aa9.82□□□□□ -0.84
NPHP4-208ENST00000478423 HRCT1Q6UXD1 115 aa9.82□□□□□ -0.84
NPHP4-208ENST00000478423 WFDC13Q8IUB5 93 aa9.82□□□□□ -0.84
NPHP4-208ENST00000478423 Q8NAQ8 132 aa9.82□□□□□ -0.84
NPHP4-208ENST00000478423 ZNF706Q9Y5V0 76 aaPredicted RBP9.82□□□□□ -0.84
NPHP4-208ENST00000478423 REG3GQ6UW15 175 aa9.82□□□□□ -0.84
NPHP4-208ENST00000478423 Q8N3U1 123 aa9.82□□□□□ -0.84
NPHP4-208ENST00000478423 CHKB-CPT1BH3BT56 60 aa9.81□□□□□ -0.84
NPHP4-208ENST00000478423 BOD1L1Q8NFC6 3051 aa9.81□□□□□ -0.84
NPHP4-208ENST00000478423 C1orf137Q5JT78 98 aa9.81□□□□□ -0.84
NPHP4-208ENST00000478423 F8WDY8 70 aa9.8□□□□□ -0.84
NPHP4-208ENST00000478423 UNC79Q9P2D8 2635 aa9.8□□□□□ -0.84
NPHP4-208ENST00000478423 NOTCH1P46531 2555 aa9.8□□□□□ -0.84
NPHP4-208ENST00000478423 C5orf47Q569G3 176 aa9.8□□□□□ -0.84
NPHP4-208ENST00000478423 MRPL55Q7Z7F7 128 aaKnown RBP9.8□□□□□ -0.84
NPHP4-208ENST00000478423 C3orf22Q8N5N4 141 aa9.8□□□□□ -0.84
NPHP4-208ENST00000478423 SERP2Q8N6R1 65 aa9.8□□□□□ -0.84
NPHP4-208ENST00000478423 Q6JHZ5 121 aa9.79□□□□□ -0.84
NPHP4-208ENST00000478423 LINC00575Q6W349 94 aa9.79□□□□□ -0.84
NPHP4-208ENST00000478423 SOSTDC1Q6X4U4 206 aa9.79□□□□□ -0.84
NPHP4-208ENST00000478423 NHLRC4P0CG21 123 aaPredicted RBP9.78□□□□□ -0.84
NPHP4-208ENST00000478423 FAM19A3Q7Z5A8 133 aa9.78□□□□□ -0.84
NPHP4-208ENST00000478423 C10orf25Q5T742 122 aa9.77□□□□□ -0.85
NPHP4-208ENST00000478423 CFAP47Q6ZTR5 3102 aa9.77□□□□□ -0.85
NPHP4-208ENST00000478423 H3BNG1 76 aa9.77□□□□□ -0.85
NPHP4-208ENST00000478423 A0A087WVE0 104 aa9.76□□□□□ -0.85
NPHP4-208ENST00000478423 IGLV5-52A0A0A0MRZ9 124 aa9.76□□□□□ -0.85
NPHP4-208ENST00000478423 C6orf48Q9UBA6 75 aa9.76□□□□□ -0.85
NPHP4-208ENST00000478423 FLNCQ14315 2725 aa9.75□□□□□ -0.85
NPHP4-208ENST00000478423 CSNK1G2-AS1Q8NCQ2 148 aa9.75□□□□□ -0.85
NPHP4-208ENST00000478423 SNURFQ9Y675 71 aa9.74□□□□□ -0.85
NPHP4-208ENST00000478423 UBR5O95071 2799 aaPredicted RBP9.74□□□□□ -0.85
NPHP4-208ENST00000478423 C1orf134Q5TEV5 83 aa9.74□□□□□ -0.85
NPHP4-208ENST00000478423 PRYO14603 147 aa9.73□□□□□ -0.85
NPHP4-208ENST00000478423 C22orf24Q9Y442 160 aa9.73□□□□□ -0.85
NPHP4-208ENST00000478423 COX7CP15954 63 aa9.73□□□□□ -0.85
NPHP4-208ENST00000478423 Q6Q795 121 aa9.73□□□□□ -0.85
NPHP4-208ENST00000478423 KRTAP1-3Q8IUG1 177 aa9.73□□□□□ -0.85
NPHP4-208ENST00000478423 FAM236DA0A1B0GTK5 79 aa9.72□□□□□ -0.85
NPHP4-208ENST00000478423 FAM236CP0DP71 79 aa9.72□□□□□ -0.85
NPHP4-208ENST00000478423 PRLHP81277 87 aa9.72□□□□□ -0.85
NPHP4-208ENST00000478423 CCDC179H3BU77 68 aa9.72□□□□□ -0.85
NPHP4-208ENST00000478423 GCN1Q92616 2671 aaKnown RBP9.72□□□□□ -0.85
NPHP4-208ENST00000478423 MDFIQ99750 246 aa9.71□□□□□ -0.85
NPHP4-208ENST00000478423 LINC00846Q9NV44 126 aa9.71□□□□□ -0.85
NPHP4-208ENST00000478423 C19orf73Q9NVV2 129 aa9.71□□□□□ -0.85
NPHP4-208ENST00000478423 SMCPP49901 116 aaPredicted RBP9.71□□□□□ -0.86
NPHP4-208ENST00000478423 GIG44P09565 113 aaPredicted RBP9.7□□□□□ -0.86
NPHP4-208ENST00000478423 Q9BRP9 147 aa9.7□□□□□ -0.86
NPHP4-208ENST00000478423 A0A087WSZ3 146 aa9.69□□□□□ -0.86
NPHP4-208ENST00000478423 FAM218AQ96MZ4 157 aa9.68□□□□□ -0.86
NPHP4-208ENST00000478423 KRTAP10-3P60369 221 aa9.67□□□□□ -0.86
NPHP4-208ENST00000478423 PRR4Q16378 134 aa9.67□□□□□ -0.86
NPHP4-208ENST00000478423 LINC00167Q96N53 147 aa9.67□□□□□ -0.86
NPHP4-208ENST00000478423 LINC00588Q9Y4M8 146 aa9.67□□□□□ -0.86
NPHP4-208ENST00000478423 NBEAL1Q6ZS30 2694 aa9.67□□□□□ -0.86
NPHP4-208ENST00000478423 USP34Q70CQ2 3546 aa9.66□□□□□ -0.86
NPHP4-208ENST00000478423 PRO0461Q9UI25 63 aa9.66□□□□□ -0.86
NPHP4-208ENST00000478423 CIRBP-AS1Q8TBR5 109 aa9.66□□□□□ -0.86
NPHP4-208ENST00000478423 ATMQ13315 3056 aa9.66□□□□□ -0.86
NPHP4-208ENST00000478423 Q6ZVQ6 151 aa9.66□□□□□ -0.86
NPHP4-208ENST00000478423 KRTAP1-1Q07627 177 aa9.66□□□□□ -0.86
NPHP4-208ENST00000478423 LITAFQ99732 161 aa9.66□□□□□ -0.86
NPHP4-208ENST00000478423 FAM30AQ9NZY2 134 aa9.65□□□□□ -0.86
NPHP4-208ENST00000478423 CDIP1Q9H305 208 aa9.65□□□□□ -0.87
NPHP4-208ENST00000478423 NDUFC1O43677 76 aa9.64□□□□□ -0.87
NPHP4-208ENST00000478423 SMCR5Q8TEV8 140 aa9.64□□□□□ -0.87
NPHP4-208ENST00000478423 ADGRG4Q8IZF6 3080 aa9.64□□□□□ -0.87
NPHP4-208ENST00000478423 CASC2Q6XLA1 102 aa9.64□□□□□ -0.87
NPHP4-208ENST00000478423 KALRNO60229 2985 aa9.64□□□□□ -0.87
NPHP4-208ENST00000478423 MPLKIPQ8TAP9 179 aa9.62□□□□□ -0.87
NPHP4-208ENST00000478423 DEFB116Q30KQ4 102 aa9.62□□□□□ -0.87
NPHP4-208ENST00000478423 TACC2O95359 2948 aa9.62□□□□□ -0.87
NPHP4-208ENST00000478423 SPTBN5Q9NRC6 3674 aaKnown RBP9.62□□□□□ -0.87
NPHP4-208ENST00000478423 TRAV7A0A075B6U4 112 aa9.62□□□□□ -0.87
NPHP4-208ENST00000478423 KIAA0087Q14695 138 aa9.62□□□□□ -0.87
NPHP4-208ENST00000478423 COL12A1Q99715 3063 aa9.61□□□□□ -0.87
NPHP4-208ENST00000478423 LINC01547P58512 204 aaPredicted RBP9.61□□□□□ -0.87
NPHP4-208ENST00000478423 KRTAP10-11P60412 298 aa9.6□□□□□ -0.87
NPHP4-208ENST00000478423 EIF4EBP3O60516 100 aaPredicted RBP9.6□□□□□ -0.87
NPHP4-208ENST00000478423 DNAH10OSP0CZ25 163 aa9.58□□□□□ -0.88
NPHP4-208ENST00000478423 SPATA3Q8NHX4 192 aa9.58□□□□□ -0.88
NPHP4-208ENST00000478423 LINC00208Q96KT6 92 aa9.58□□□□□ -0.88
NPHP4-208ENST00000478423 DMXL2Q8TDJ6 3036 aa9.58□□□□□ -0.88
NPHP4-208ENST00000478423 NBDYA0A0U1RRE5 68 aa9.57□□□□□ -0.88
NPHP4-208ENST00000478423 K7EIL1 84 aa9.57□□□□□ -0.88
NPHP4-208ENST00000478423 GVQW2A0A096LPI5 108 aaPredicted RBP9.57□□□□□ -0.88
NPHP4-208ENST00000478423 NBEAL2Q6ZNJ1 2754 aa9.57□□□□□ -0.88
NPHP4-208ENST00000478423 IGHV6-1A0A0B4J1U7 121 aa9.56□□□□□ -0.88
NPHP4-208ENST00000478423 Q8N9L7 120 aa9.56□□□□□ -0.88
NPHP4-208ENST00000478423 ELOF1P60002 83 aaKnown RBP9.56□□□□□ -0.88
NPHP4-208ENST00000478423 Q6ZRP5 223 aa9.56□□□□□ -0.88
NPHP4-208ENST00000478423 REV3LO60673 3130 aa9.56□□□□□ -0.88
NPHP4-208ENST00000478423 LINC00612Q8N6U2 182 aa9.55□□□□□ -0.88
NPHP4-208ENST00000478423 BRK1Q8WUW1 75 aa9.54□□□□□ -0.88
NPHP4-208ENST00000478423 SEC61GP60059 68 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms