RNA–Protein interactions for RNA: ENST00000476791.1

SPTLC3-205, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 1 (best)

Gene SPTLC3, Length 2,480 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-205ENST00000476791 IGLV3-1P01715 115 aa3.67□□□□□ -1.82
SPTLC3-205ENST00000476791 CCL3L1P16619 93 aa3.67□□□□□ -1.82
SPTLC3-205ENST00000476791 ZDBF2Q9HCK1 2354 aa3.67□□□□□ -1.82
SPTLC3-205ENST00000476791 TECTAO75443 2155 aa3.67□□□□□ -1.82
SPTLC3-205ENST00000476791 RPL39LQ96EH5 51 aaKnown RBP3.67□□□□□ -1.82
SPTLC3-205ENST00000476791 RTTNQ86VV8 2226 aa3.66□□□□□ -1.82
SPTLC3-205ENST00000476791 TRGV2A0A075B6R0 118 aa3.66□□□□□ -1.82
SPTLC3-205ENST00000476791 Q5W150 140 aa3.66□□□□□ -1.82
SPTLC3-205ENST00000476791 LINC00472Q9H8W2 130 aa3.66□□□□□ -1.82
SPTLC3-205ENST00000476791 A0A087WTM6 91 aa3.65□□□□□ -1.82
SPTLC3-205ENST00000476791 ETDCA0A1B0GVM5 59 aa3.65□□□□□ -1.82
SPTLC3-205ENST00000476791 FAM208BQ5VWN6 2430 aa3.65□□□□□ -1.82
SPTLC3-205ENST00000476791 GIG44P09565 113 aaPredicted RBP3.64□□□□□ -1.83
SPTLC3-205ENST00000476791 DEFB104AQ8WTQ1 72 aa3.64□□□□□ -1.83
SPTLC3-205ENST00000476791 KRTAP1-1Q07627 177 aa3.64□□□□□ -1.83
SPTLC3-205ENST00000476791 ASCC3Q8N3C0 2202 aaKnown RBP3.64□□□□□ -1.83
SPTLC3-205ENST00000476791 HTTP42858 3142 aa3.64□□□□□ -1.83
SPTLC3-205ENST00000476791 IGKV2-28A0A075B6P5 120 aa3.63□□□□□ -1.83
SPTLC3-205ENST00000476791 IGKV2D-28P01615 120 aa3.63□□□□□ -1.83
SPTLC3-205ENST00000476791 SPINT4Q6UDR6 99 aa3.63□□□□□ -1.83
SPTLC3-205ENST00000476791 DMAC1Q96GE9 116 aa3.63□□□□□ -1.83
SPTLC3-205ENST00000476791 FAM186AA6NE01 2351 aa3.63□□□□□ -1.83
SPTLC3-205ENST00000476791 IGLV7-46A0A075B6I9 117 aa3.63□□□□□ -1.83
SPTLC3-205ENST00000476791 NDUFA1O15239 70 aa3.63□□□□□ -1.83
SPTLC3-205ENST00000476791 SPTBN5Q9NRC6 3674 aaKnown RBP3.63□□□□□ -1.83
SPTLC3-205ENST00000476791 IGLV11-55A0A075B6I3 123 aa3.62□□□□□ -1.83
SPTLC3-205ENST00000476791 KCNQ1DNQ9H478 68 aa3.62□□□□□ -1.83
SPTLC3-205ENST00000476791 RANBP2P49792 3224 aaKnown RBP3.62□□□□□ -1.83
SPTLC3-205ENST00000476791 ASXL3Q9C0F0 2248 aa3.61□□□□□ -1.83
SPTLC3-205ENST00000476791 LINC00158P58513 81 aa3.61□□□□□ -1.83
SPTLC3-205ENST00000476791 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.61□□□□□ -1.839e-8■■□□□ 12
SPTLC3-205ENST00000476791 IGHV3-64DA0A0J9YX35 117 aa3.61□□□□□ -1.83
SPTLC3-205ENST00000476791 DEFB126Q9BYW3 111 aa3.61□□□□□ -1.83
SPTLC3-205ENST00000476791 CENPFP49454 3210 aa3.6□□□□□ -1.83
SPTLC3-205ENST00000476791 UQCR11O14957 56 aa3.6□□□□□ -1.83
SPTLC3-205ENST00000476791 CACNA1HO95180 2353 aa3.59□□□□□ -1.83
SPTLC3-205ENST00000476791 PDE6HQ13956 83 aa3.59□□□□□ -1.83
SPTLC3-205ENST00000476791 ATRXP46100 2492 aa3.59□□□□□ -1.84
SPTLC3-205ENST00000476791 ICE1Q9Y2F5 2266 aa3.58□□□□□ -1.84
SPTLC3-205ENST00000476791 CHD7Q9P2D1 2997 aa3.58□□□□□ -1.84
SPTLC3-205ENST00000476791 STATHP02808 62 aa3.58□□□□□ -1.84
SPTLC3-205ENST00000476791 DEFB114Q30KQ6 69 aa3.58□□□□□ -1.84
SPTLC3-205ENST00000476791 USP34Q70CQ2 3546 aa3.58□□□□□ -1.84
SPTLC3-205ENST00000476791 J3QKU1 62 aa3.58□□□□□ -1.84
SPTLC3-205ENST00000476791 POLR2KP53803 58 aaKnown RBP3.58□□□□□ -1.84
SPTLC3-205ENST00000476791 LINC00315P59091 139 aa3.58□□□□□ -1.84
SPTLC3-205ENST00000476791 CHD8Q9HCK8 2581 aa3.57□□□□□ -1.84
SPTLC3-205ENST00000476791 CACNA1GO43497 2377 aa3.57□□□□□ -1.84
SPTLC3-205ENST00000476791 A0A096LNT2 108 aa3.57□□□□□ -1.84
SPTLC3-205ENST00000476791 COX7BP24311 80 aa3.57□□□□□ -1.84
SPTLC3-205ENST00000476791 GVINP1Q7Z2Y8 2422 aa3.57□□□□□ -1.84
SPTLC3-205ENST00000476791 IGKV2-40A0A087WW87 121 aaPredicted RBP3.56□□□□□ -1.84
SPTLC3-205ENST00000476791 IGKV2D-40P01614 121 aaPredicted RBP3.56□□□□□ -1.84
SPTLC3-205ENST00000476791 PLA2G2AP14555 144 aa3.56□□□□□ -1.84
SPTLC3-205ENST00000476791 LYZP61626 148 aa3.56□□□□□ -1.84
SPTLC3-205ENST00000476791 GPR179Q6PRD1 2367 aa3.56□□□□□ -1.84
SPTLC3-205ENST00000476791 ACACBO00763 2458 aa3.56□□□□□ -1.84
SPTLC3-205ENST00000476791 EPG5Q9HCE0 2579 aa3.56□□□□□ -1.84
SPTLC3-205ENST00000476791 NBDYA0A0U1RRE5 68 aa3.56□□□□□ -1.84
SPTLC3-205ENST00000476791 Q96NJ1 140 aa3.56□□□□□ -1.84
SPTLC3-205ENST00000476791 LINC00304Q8N9R0 145 aa3.55□□□□□ -1.84
SPTLC3-205ENST00000476791 ZNRD1Q9P1U0 126 aa3.55□□□□□ -1.84
SPTLC3-205ENST00000476791 DEFB103AP81534 67 aa3.55□□□□□ -1.84
SPTLC3-205ENST00000476791 Q8N377 158 aa3.55□□□□□ -1.84
SPTLC3-205ENST00000476791 C16orf74Q96GX8 76 aa3.55□□□□□ -1.84
SPTLC3-205ENST00000476791 CNOT1A5YKK6 2376 aaKnown RBP3.55□□□□□ -1.84
SPTLC3-205ENST00000476791 TRGV1A0A0A0MS02 117 aa3.54□□□□□ -1.84
SPTLC3-205ENST00000476791 A0A1B0GU69 56 aa3.54□□□□□ -1.84
SPTLC3-205ENST00000476791 PRCDQ00LT1 54 aa3.54□□□□□ -1.84
SPTLC3-205ENST00000476791 MRGPRG-AS1Q2M3A8 158 aa3.54□□□□□ -1.84
SPTLC3-205ENST00000476791 A0A0J9YWU9 116 aa3.54□□□□□ -1.84
SPTLC3-205ENST00000476791 USP24Q9UPU5 2620 aa3.54□□□□□ -1.84
SPTLC3-205ENST00000476791 OTOGLQ3ZCN5 2332 aa3.54□□□□□ -1.84
SPTLC3-205ENST00000476791 PTPRZ1P23471 2315 aaPredicted RBP3.53□□□□□ -1.84
SPTLC3-205ENST00000476791 SPTBN4Q9H254 2564 aa3.53□□□□□ -1.84
SPTLC3-205ENST00000476791 CRIPTQ9P021 101 aa3.53□□□□□ -1.84
SPTLC3-205ENST00000476791 RNF5Q99942 180 aa3.52□□□□□ -1.85
SPTLC3-205ENST00000476791 CDKN2A-AS1Q9UH64 79 aa3.52□□□□□ -1.85
SPTLC3-205ENST00000476791 BRWD1Q9NSI6 2320 aa3.52□□□□□ -1.85
SPTLC3-205ENST00000476791 A0A1B0GU33 70 aa3.51□□□□□ -1.85
SPTLC3-205ENST00000476791 HRES1P13985 223 aa3.51□□□□□ -1.85
SPTLC3-205ENST00000476791 KRTAP10-11P60412 298 aa3.51□□□□□ -1.85
SPTLC3-205ENST00000476791 CHD6Q8TD26 2715 aa3.51□□□□□ -1.85
SPTLC3-205ENST00000476791 UNC80Q8N2C7 3258 aa3.51□□□□□ -1.85
SPTLC3-205ENST00000476791 PATE1Q8WXA2 126 aa3.5□□□□□ -1.85
SPTLC3-205ENST00000476791 RIF1Q5UIP0 2472 aaKnown RBP3.5□□□□□ -1.85
SPTLC3-205ENST00000476791 COL6A6A6NMZ7 2263 aa3.5□□□□□ -1.85
SPTLC3-205ENST00000476791 MAP1BP46821 2468 aaKnown RBP3.5□□□□□ -1.85
SPTLC3-205ENST00000476791 NCOR2Q9Y618 2525 aa3.49□□□□□ -1.85
SPTLC3-205ENST00000476791 ASH1LQ9NR48 2969 aaKnown RBP3.49□□□□□ -1.85
SPTLC3-205ENST00000476791 ZNF292O60281 2723 aa3.49□□□□□ -1.85
SPTLC3-205ENST00000476791 FAM168BA1KXE4 195 aa3.49□□□□□ -1.85
SPTLC3-205ENST00000476791 DEFB108AA8MXU0 73 aa3.49□□□□□ -1.85
SPTLC3-205ENST00000476791 LINC00575Q6W349 94 aa3.49□□□□□ -1.85
SPTLC3-205ENST00000476791 Q6ZQY7 126 aa3.49□□□□□ -1.85
SPTLC3-205ENST00000476791 TPRP12270 2363 aaKnown RBP3.49□□□□□ -1.85
SPTLC3-205ENST00000476791 MKI67P46013 3256 aaKnown RBP3.49□□□□□ -1.85
SPTLC3-205ENST00000476791 I3L2K1 104 aa3.48□□□□□ -1.85
SPTLC3-205ENST00000476791 TRANK1O15050 2925 aa3.48□□□□□ -1.85
SPTLC3-205ENST00000476791 RPL39P5Q59GN2 51 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 122.1 ms