RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 ATP6V0E2Q8NHE4 81 aa2.88□□□□□ -1.95
VPS13D-206ENST00000476045 PPDPFLQ8WWR9 84 aa2.88□□□□□ -1.95
VPS13D-206ENST00000476045 GEMIN7Q9H840 131 aaKnown RBP2.88□□□□□ -1.95
VPS13D-206ENST00000476045 NDUFA12Q9UI09 145 aa2.88□□□□□ -1.95
VPS13D-206ENST00000476045 UBE2D4Q9Y2X8 147 aa2.88□□□□□ -1.95
VPS13D-206ENST00000476045 PYGO1Q9Y3Y4 419 aa2.88□□□□□ -1.95
VPS13D-206ENST00000476045 LINC00588Q9Y4M8 146 aa2.88□□□□□ -1.95
VPS13D-206ENST00000476045 TRBV20-1A0A075B6N2 111 aa2.87□□□□□ -1.95
VPS13D-206ENST00000476045 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.87□□□□□ -1.95
VPS13D-206ENST00000476045 A0A0B4J2C4 111 aa2.87□□□□□ -1.95
VPS13D-206ENST00000476045 IGHV1-58A0A0C4DH39 117 aa2.87□□□□□ -1.95
VPS13D-206ENST00000476045 A0A0U1RRA0 63 aa2.87□□□□□ -1.95
VPS13D-206ENST00000476045 A0A1B0GUV1 79 aa2.87□□□□□ -1.95
VPS13D-206ENST00000476045 TINCRA0A1B0GVN0 87 aa2.87□□□□□ -1.95
VPS13D-206ENST00000476045 SLC25A20O43772 301 aa2.87□□□□□ -1.95
VPS13D-206ENST00000476045 CIDEAO60543 219 aa2.87□□□□□ -1.95
VPS13D-206ENST00000476045 MT-ATP8P03928 68 aa2.87□□□□□ -1.95
VPS13D-206ENST00000476045 SCGB1A1P11684 91 aa2.87□□□□□ -1.95
VPS13D-206ENST00000476045 MRPS36P82909 103 aaKnown RBP2.87□□□□□ -1.95
VPS13D-206ENST00000476045 GAGE5Q13069 117 aa2.87□□□□□ -1.95
VPS13D-206ENST00000476045 ADAMTSL4-AS1Q5T5F5 129 aa2.87□□□□□ -1.95
VPS13D-206ENST00000476045 Q6ZTI0 123 aa2.87□□□□□ -1.95
VPS13D-206ENST00000476045 TEN1Q86WV5 123 aa2.87□□□□□ -1.95
VPS13D-206ENST00000476045 DAND5Q8N907 189 aa2.87□□□□□ -1.95
VPS13D-206ENST00000476045 DNAJC30Q96LL9 226 aa2.87□□□□□ -1.95
VPS13D-206ENST00000476045 LITAFQ99732 161 aa2.87□□□□□ -1.95
VPS13D-206ENST00000476045 SPANXA1Q9NS26 97 aa2.87□□□□□ -1.95
VPS13D-206ENST00000476045 PRO0255Q9UI72 69 aa2.87□□□□□ -1.95
VPS13D-206ENST00000476045 A0A096LPF7 62 aa2.86□□□□□ -1.95
VPS13D-206ENST00000476045 LINC00694P0DN24 101 aa2.86□□□□□ -1.95
VPS13D-206ENST00000476045 RPL13AP40429 203 aaKnown RBP2.86□□□□□ -1.95
VPS13D-206ENST00000476045 COX6A2Q02221 97 aa2.86□□□□□ -1.95
VPS13D-206ENST00000476045 ATXN8Q156A1 80 aa2.86□□□□□ -1.95
VPS13D-206ENST00000476045 MRPL23Q16540 153 aaKnown RBP2.86□□□□□ -1.95
VPS13D-206ENST00000476045 MIAQ16674 131 aa2.86□□□□□ -1.95
VPS13D-206ENST00000476045 LINC01620Q4KN68 170 aa2.86□□□□□ -1.95
VPS13D-206ENST00000476045 CLEC2BQ92478 149 aa2.86□□□□□ -1.95
VPS13D-206ENST00000476045 ZNF625Q96I27 306 aaPredicted RBP2.86□□□□□ -1.95
VPS13D-206ENST00000476045 TMEM101Q96IK0 257 aa2.86□□□□□ -1.95
VPS13D-206ENST00000476045 VSIG2Q96IQ7 327 aa2.86□□□□□ -1.95
VPS13D-206ENST00000476045 CDKN2A-AS1Q9UH64 79 aa2.86□□□□□ -1.95
VPS13D-206ENST00000476045 VPS13BQ7Z7G8 4022 aa2.86□□□□□ -1.95
VPS13D-206ENST00000476045 FLG2Q5D862 2391 aaPredicted RBP2.86□□□□□ -1.95
VPS13D-206ENST00000476045 SRRM2Q9UQ35 2752 aaKnown RBP2.85□□□□□ -1.95
VPS13D-206ENST00000476045 TRAV13-1A0A0B4J241 112 aa2.85□□□□□ -1.95
VPS13D-206ENST00000476045 TRAV4A0A0B4J268 109 aa2.85□□□□□ -1.95
VPS13D-206ENST00000476045 TRGV4A0A0C4DH28 118 aa2.85□□□□□ -1.95
VPS13D-206ENST00000476045 IGKV3OR2-268A0A0C4DH90 116 aa2.85□□□□□ -1.95
VPS13D-206ENST00000476045 TRBV10-2A0A0K0K1G8 114 aa2.85□□□□□ -1.95
VPS13D-206ENST00000476045 LOC100131303A0A0U1RQF7 123 aa2.85□□□□□ -1.95
VPS13D-206ENST00000476045 CRYBA4P53673 196 aa2.85□□□□□ -1.95
VPS13D-206ENST00000476045 XGP55808 180 aa2.85□□□□□ -1.95
VPS13D-206ENST00000476045 CKS1BP61024 79 aa2.85□□□□□ -1.95
VPS13D-206ENST00000476045 RPL36AP83881 106 aaKnown RBP2.85□□□□□ -1.95
VPS13D-206ENST00000476045 SPANXDQ9BXN6 97 aa2.85□□□□□ -1.95
VPS13D-206ENST00000476045 SPANXCQ9NY87 97 aa2.85□□□□□ -1.95
VPS13D-206ENST00000476045 MYCBP2O75592 4640 aa2.85□□□□□ -1.95
VPS13D-206ENST00000476045 IGLV5-52A0A0A0MRZ9 124 aa2.84□□□□□ -1.95
VPS13D-206ENST00000476045 TRAV8-4A0A0B4J246 113 aa2.84□□□□□ -1.95
VPS13D-206ENST00000476045 TRBV30A0A0K0K1B3 111 aa2.84□□□□□ -1.95
VPS13D-206ENST00000476045 K7EQD1 137 aa2.84□□□□□ -1.95
VPS13D-206ENST00000476045 NDUFA1O15239 70 aa2.84□□□□□ -1.95
VPS13D-206ENST00000476045 TIMM17BO60830 172 aa2.84□□□□□ -1.95
VPS13D-206ENST00000476045 DNAH10OSP0CZ25 163 aa2.84□□□□□ -1.95
VPS13D-206ENST00000476045 GAGE6Q13070 117 aa2.84□□□□□ -1.95
VPS13D-206ENST00000476045 ESRGQ1W209 222 aa2.84□□□□□ -1.95
VPS13D-206ENST00000476045 MEIG1Q5JSS6 88 aa2.84□□□□□ -1.95
VPS13D-206ENST00000476045 LINC00242Q5T6M2 205 aa2.84□□□□□ -1.95
VPS13D-206ENST00000476045 C2orf82Q6UX34 121 aa2.84□□□□□ -1.95
VPS13D-206ENST00000476045 Q6ZRN7 208 aaPredicted RBP2.84□□□□□ -1.95
VPS13D-206ENST00000476045 NTM-AS1Q6ZSK4 140 aa2.84□□□□□ -1.95
VPS13D-206ENST00000476045 IGLV5-45A0A087WSX0 123 aa2.83□□□□□ -1.96
VPS13D-206ENST00000476045 A0A1B0GV72 72 aa2.83□□□□□ -1.96
VPS13D-206ENST00000476045 SMIM1B2RUZ4 78 aa2.83□□□□□ -1.96
VPS13D-206ENST00000476045 H7C423 109 aa2.83□□□□□ -1.96
VPS13D-206ENST00000476045 UBE2L6O14933 153 aa2.83□□□□□ -1.96
VPS13D-206ENST00000476045 COX6CP09669 75 aa2.83□□□□□ -1.96
VPS13D-206ENST00000476045 IFITM1P13164 125 aa2.83□□□□□ -1.96
VPS13D-206ENST00000476045 HERVK_113P63121 156 aa2.83□□□□□ -1.96
VPS13D-206ENST00000476045 CIRBPQ14011 172 aaKnown RBP2.83□□□□□ -1.96
VPS13D-206ENST00000476045 LINC01556Q5JQF7 62 aa2.83□□□□□ -1.96
VPS13D-206ENST00000476045 SOSTDC1Q6X4U4 206 aa2.83□□□□□ -1.96
VPS13D-206ENST00000476045 LINC00308Q8TCZ7 52 aa2.83□□□□□ -1.96
VPS13D-206ENST00000476045 UBE2WQ96B02 151 aa2.83□□□□□ -1.96
VPS13D-206ENST00000476045 TMEM243Q9BU79 118 aa2.83□□□□□ -1.96
VPS13D-206ENST00000476045 HERC1Q15751 4861 aa2.83□□□□□ -1.96
VPS13D-206ENST00000476045 FAT1Q14517 4588 aa2.82□□□□□ -1.96
VPS13D-206ENST00000476045 IGLV5-37A0A075B6J1 123 aa2.82□□□□□ -1.96
VPS13D-206ENST00000476045 TRBV10-1A0A0K0K1A3 114 aa2.82□□□□□ -1.96
VPS13D-206ENST00000476045 TEX49A0A1B0GTD5 131 aa2.82□□□□□ -1.96
VPS13D-206ENST00000476045 TRBV6-4A0A1B0GX49 114 aa2.82□□□□□ -1.96
VPS13D-206ENST00000476045 TMEM262E9PQX1 116 aa2.82□□□□□ -1.96
VPS13D-206ENST00000476045 F8WDY8 70 aa2.82□□□□□ -1.96
VPS13D-206ENST00000476045 M0QXV9 152 aa2.82□□□□□ -1.96
VPS13D-206ENST00000476045 PSCAO43653 123 aa2.82□□□□□ -1.96
VPS13D-206ENST00000476045 LYPD5Q6UWN5 251 aa2.82□□□□□ -1.96
VPS13D-206ENST00000476045 DAZ4Q86SG3 579 aaKnown RBP2.82□□□□□ -1.96
VPS13D-206ENST00000476045 DAZ3Q9NR90 486 aaKnown RBP2.82□□□□□ -1.96
VPS13D-206ENST00000476045 CDC42SE2Q9NRR3 84 aa2.82□□□□□ -1.96
VPS13D-206ENST00000476045 TOMM7Q9P0U1 55 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms