RNA–Protein interactions for RNA: ENST00000474412.1

VPS50-211, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-211ENST00000474412 IGLV7-43P04211 117 aa4.18□□□□□ -1.74
VPS50-211ENST00000474412 SPINK8P0C7L1 97 aa4.18□□□□□ -1.74
VPS50-211ENST00000474412 KRTAP10-8P60410 259 aa4.18□□□□□ -1.74
VPS50-211ENST00000474412 Q8IZM0 81 aa4.18□□□□□ -1.74
VPS50-211ENST00000474412 PACRGQ96M98 296 aaPredicted RBP4.18□□□□□ -1.74
VPS50-211ENST00000474412 SCGB3A1Q96QR1 104 aa4.18□□□□□ -1.74
VPS50-211ENST00000474412 GNB1LQ9BYB4 327 aa4.18□□□□□ -1.74
VPS50-211ENST00000474412 UBR4Q5T4S7 5183 aa4.18□□□□□ -1.74
VPS50-211ENST00000474412 F8WDY8 70 aa4.17□□□□□ -1.74
VPS50-211ENST00000474412 KRTAP1-4P0C5Y4 121 aa4.17□□□□□ -1.74
VPS50-211ENST00000474412 S100PP25815 95 aa4.17□□□□□ -1.74
VPS50-211ENST00000474412 HERVK_113P63121 156 aa4.17□□□□□ -1.74
VPS50-211ENST00000474412 UBE2BP63146 152 aa4.17□□□□□ -1.74
VPS50-211ENST00000474412 RHEBQ15382 184 aa4.17□□□□□ -1.74
VPS50-211ENST00000474412 REG3GQ6UW15 175 aa4.17□□□□□ -1.74
VPS50-211ENST00000474412 ERASQ7Z444 233 aa4.17□□□□□ -1.74
VPS50-211ENST00000474412 LINC01561Q8N1V8 128 aa4.17□□□□□ -1.74
VPS50-211ENST00000474412 C18orf32Q8TCD1 76 aa4.17□□□□□ -1.74
VPS50-211ENST00000474412 GEMIN7Q9H840 131 aaKnown RBP4.17□□□□□ -1.74
VPS50-211ENST00000474412 LRP2P98164 4655 aa4.16□□□□□ -1.74
VPS50-211ENST00000474412 SCO1O75880 301 aa4.16□□□□□ -1.74
VPS50-211ENST00000474412 CKS1BP61024 79 aa4.16□□□□□ -1.74
VPS50-211ENST00000474412 FABP9Q0Z7S8 132 aa4.16□□□□□ -1.74
VPS50-211ENST00000474412 FA2HQ7L5A8 372 aa4.16□□□□□ -1.74
VPS50-211ENST00000474412 LPAP08519 4548 aa4.15□□□□□ -1.75
VPS50-211ENST00000474412 TINCRA0A1B0GVN0 87 aa4.15□□□□□ -1.75
VPS50-211ENST00000474412 F8VRH5 84 aa4.15□□□□□ -1.75
VPS50-211ENST00000474412 H0Y9J4 135 aa4.15□□□□□ -1.75
VPS50-211ENST00000474412 APOC3P02656 99 aa4.15□□□□□ -1.75
VPS50-211ENST00000474412 ZNF22P17026 224 aaPredicted RBP4.15□□□□□ -1.75
VPS50-211ENST00000474412 C6orf226Q5I0X4 101 aa4.15□□□□□ -1.75
VPS50-211ENST00000474412 COX7B2Q8TF08 81 aa4.15□□□□□ -1.75
VPS50-211ENST00000474412 YPEL4Q96NS1 127 aa4.15□□□□□ -1.75
VPS50-211ENST00000474412 CST9LQ9H4G1 147 aa4.15□□□□□ -1.75
VPS50-211ENST00000474412 SMCO4Q9NRQ5 59 aa4.15□□□□□ -1.75
VPS50-211ENST00000474412 C11orf86A6NJI1 115 aa4.14□□□□□ -1.75
VPS50-211ENST00000474412 IGLC3P0DOY3 106 aa4.14□□□□□ -1.75
VPS50-211ENST00000474412 PMVKQ15126 192 aa4.14□□□□□ -1.75
VPS50-211ENST00000474412 Q8NDZ9 215 aa4.14□□□□□ -1.75
VPS50-211ENST00000474412 C22orf24Q9Y442 160 aa4.14□□□□□ -1.75
VPS50-211ENST00000474412 TRAPPC1Q9Y5R8 145 aa4.14□□□□□ -1.75
VPS50-211ENST00000474412 HBDP02042 147 aa4.13□□□□□ -1.75
VPS50-211ENST00000474412 CXCL5P42830 114 aa4.13□□□□□ -1.75
VPS50-211ENST00000474412 RAB5BP61020 215 aa4.13□□□□□ -1.75
VPS50-211ENST00000474412 SEC11AP67812 179 aa4.13□□□□□ -1.75
VPS50-211ENST00000474412 COX19Q49B96 90 aa4.13□□□□□ -1.75
VPS50-211ENST00000474412 PDZD11Q5EBL8 140 aa4.13□□□□□ -1.75
VPS50-211ENST00000474412 CBLN2Q8IUK8 224 aa4.13□□□□□ -1.75
VPS50-211ENST00000474412 Q8NBF4 154 aa4.13□□□□□ -1.75
VPS50-211ENST00000474412 DIRC1Q969H9 104 aa4.13□□□□□ -1.75
VPS50-211ENST00000474412 RPL37AP8A6NKH3 93 aa4.12□□□□□ -1.75
VPS50-211ENST00000474412 NDUFA6P56556 154 aa4.12□□□□□ -1.75
VPS50-211ENST00000474412 MRPL55Q7Z7F7 128 aaKnown RBP4.12□□□□□ -1.75
VPS50-211ENST00000474412 ZNF625Q96I27 306 aaPredicted RBP4.12□□□□□ -1.75
VPS50-211ENST00000474412 SNAPINO95295 136 aa4.11□□□□□ -1.75
VPS50-211ENST00000474412 LINC00614P0C842 121 aa4.11□□□□□ -1.75
VPS50-211ENST00000474412 G0S2P27469 103 aa4.11□□□□□ -1.75
VPS50-211ENST00000474412 PFN2P35080 140 aa4.11□□□□□ -1.75
VPS50-211ENST00000474412 LINC00167Q96N53 147 aa4.11□□□□□ -1.75
VPS50-211ENST00000474412 IGKV2-28A0A075B6P5 120 aa4.1□□□□□ -1.75
VPS50-211ENST00000474412 IGKV2D-28P01615 120 aa4.1□□□□□ -1.75
VPS50-211ENST00000474412 SVBPQ8N300 66 aa4.1□□□□□ -1.75
VPS50-211ENST00000474412 Q8N377 158 aa4.1□□□□□ -1.75
VPS50-211ENST00000474412 LINC01549A6NIU2 74 aa4.09□□□□□ -1.75
VPS50-211ENST00000474412 H3BRM9 83 aa4.09□□□□□ -1.75
VPS50-211ENST00000474412 NUPR1O60356 82 aa4.09□□□□□ -1.75
VPS50-211ENST00000474412 ZNF861PO60384 105 aa4.09□□□□□ -1.75
VPS50-211ENST00000474412 PRLHP81277 87 aa4.09□□□□□ -1.75
VPS50-211ENST00000474412 TMEM170BQ5T4T1 132 aa4.09□□□□□ -1.75
VPS50-211ENST00000474412 KRTAP5-1Q6L8H4 278 aa4.09□□□□□ -1.75
VPS50-211ENST00000474412 BAGE3Q86Y29 109 aa4.09□□□□□ -1.75
VPS50-211ENST00000474412 KRTAP13-1Q8IUC0 172 aa4.09□□□□□ -1.75
VPS50-211ENST00000474412 FAM19A2Q8N3H0 131 aa4.09□□□□□ -1.75
VPS50-211ENST00000474412 SND1-IT1Q9HBX3 110 aa4.09□□□□□ -1.75
VPS50-211ENST00000474412 ANAPC11Q9NYG5 84 aa4.09□□□□□ -1.75
VPS50-211ENST00000474412 TP73-AS1Q9UF72 201 aa4.09□□□□□ -1.75
VPS50-211ENST00000474412 ERG28Q9UKR5 140 aa4.09□□□□□ -1.75
VPS50-211ENST00000474412 IGLV1-50A0A075B6I6 118 aa4.08□□□□□ -1.76
VPS50-211ENST00000474412 A0A0U1RRA0 63 aa4.08□□□□□ -1.76
VPS50-211ENST00000474412 TMEM238C9JI98 176 aa4.08□□□□□ -1.76
VPS50-211ENST00000474412 BCE1O60756 84 aa4.08□□□□□ -1.76
VPS50-211ENST00000474412 ATP5LO75964 103 aa4.08□□□□□ -1.76
VPS50-211ENST00000474412 NDUFA5Q16718 116 aa4.08□□□□□ -1.76
VPS50-211ENST00000474412 CHTOPQ9Y3Y2 248 aaKnown RBP4.08□□□□□ -1.76
VPS50-211ENST00000474412 TMEM223A0PJW6 202 aa4.07□□□□□ -1.76
VPS50-211ENST00000474412 H0Y8G0 127 aa4.07□□□□□ -1.76
VPS50-211ENST00000474412 TSPEAR-AS2P59090 65 aa4.07□□□□□ -1.76
VPS50-211ENST00000474412 KRTAP13-2Q52LG2 175 aa4.07□□□□□ -1.76
VPS50-211ENST00000474412 LBHQ53QV2 105 aaPredicted RBP4.07□□□□□ -1.76
VPS50-211ENST00000474412 NKAPP1Q8N9T2 125 aa4.07□□□□□ -1.76
VPS50-211ENST00000474412 IFI27L1Q96BM0 104 aa4.07□□□□□ -1.76
VPS50-211ENST00000474412 TRGC2P03986 189 aa4.06□□□□□ -1.76
VPS50-211ENST00000474412 SLC7A5P1Q8MH63 180 aa4.06□□□□□ -1.76
VPS50-211ENST00000474412 TRAV12-1A0A0B4J245 112 aa4.05□□□□□ -1.76
VPS50-211ENST00000474412 M0R378 163 aa4.05□□□□□ -1.76
VPS50-211ENST00000474412 HSBP1O75506 76 aa4.05□□□□□ -1.76
VPS50-211ENST00000474412 SERF1AO75920 110 aa4.05□□□□□ -1.76
VPS50-211ENST00000474412 RPL28P46779 137 aaKnown RBP4.05□□□□□ -1.76
VPS50-211ENST00000474412 CHCHD1Q96BP2 118 aaKnown RBP4.05□□□□□ -1.76
VPS50-211ENST00000474412 TMEM126AQ9H061 195 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms