RNA–Protein interactions for RNA: ENST00000472844.1

NUP35-208, Transcript of nucleoporin 35, human

TSL 3

Gene NUP35, Length 514 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP35-208	ENST00000472844		Q8N9P0	234 aa	Predicted RBP	4.16	□□□□□ -1.74
NUP35-208	ENST00000472844	HILPDA	Q9Y5L2	63 aa		4.16	□□□□□ -1.74
NUP35-208	ENST00000472844	LHFPL6	Q9Y693	200 aa		4.16	□□□□□ -1.74
NUP35-208	ENST00000472844	IGHV3OR16-8	A0A075B7F1	116 aa		4.15	□□□□□ -1.75
NUP35-208	ENST00000472844	FXYD6-FXYD2	A0A087WZ82	144 aa		4.15	□□□□□ -1.75
NUP35-208	ENST00000472844	C10orf142	B7Z368	130 aa		4.15	□□□□□ -1.75
NUP35-208	ENST00000472844	PSCA	O43653	123 aa		4.15	□□□□□ -1.75
NUP35-208	ENST00000472844	PLGLA	Q15195	96 aa		4.15	□□□□□ -1.75
NUP35-208	ENST00000472844	KRTAP15-1	Q3LI76	137 aa		4.15	□□□□□ -1.75
NUP35-208	ENST00000472844	HIGD2A	Q9BW72	106 aa		4.15	□□□□□ -1.75
NUP35-208	ENST00000472844	FXYD6	Q9H0Q3	95 aa		4.15	□□□□□ -1.75
NUP35-208	ENST00000472844	TMSB15B	A0A087X1C1	80 aa		4.14	□□□□□ -1.75
NUP35-208	ENST00000472844		A0A1W2PNM2	257 aa		4.14	□□□□□ -1.75
NUP35-208	ENST00000472844	CEBPZOS	A8MTT3	80 aa		4.14	□□□□□ -1.75
NUP35-208	ENST00000472844	UBE2D1	P51668	147 aa		4.14	□□□□□ -1.75
NUP35-208	ENST00000472844	KRTAP24-1	Q3LI83	254 aa		4.14	□□□□□ -1.75
NUP35-208	ENST00000472844	KRTAP26-1	Q6PEX3	210 aa		4.14	□□□□□ -1.75
NUP35-208	ENST00000472844	BAGE3	Q86Y29	109 aa		4.14	□□□□□ -1.75
NUP35-208	ENST00000472844	BAGE2	Q86Y30	109 aa		4.14	□□□□□ -1.75
NUP35-208	ENST00000472844	LINC00167	Q96N53	147 aa		4.14	□□□□□ -1.75
NUP35-208	ENST00000472844	ARL2-SNX15	V9GYD0	113 aa		4.14	□□□□□ -1.75
NUP35-208	ENST00000472844	USF3	Q68DE3	2245 aa		4.13	□□□□□ -1.75
NUP35-208	ENST00000472844	FAM223B	A6NKX1	122 aa		4.13	□□□□□ -1.75
NUP35-208	ENST00000472844	PYDC2	Q56P42	97 aa		4.13	□□□□□ -1.75
NUP35-208	ENST00000472844	LYPD1	Q8N2G4	141 aa		4.13	□□□□□ -1.75
NUP35-208	ENST00000472844	HEATR5B	Q9P2D3	2071 aa		4.13	□□□□□ -1.75
NUP35-208	ENST00000472844	HEATR1	Q9H583	2144 aa	Known RBP	4.12	□□□□□ -1.75
NUP35-208	ENST00000472844	IGHV3-33	P01772	117 aa		4.12	□□□□□ -1.75
NUP35-208	ENST00000472844	KPRP	Q5T749	579 aa	Predicted RBP	4.12	□□□□□ -1.75
NUP35-208	ENST00000472844		Q6JHZ5	121 aa		4.12	□□□□□ -1.75
NUP35-208	ENST00000472844	CDC42SE2	Q9NRR3	84 aa		4.12	□□□□□ -1.75
NUP35-208	ENST00000472844	TMEM14B	Q9NUH8	114 aa		4.12	□□□□□ -1.75
NUP35-208	ENST00000472844	SACS	Q9NZJ4	4579 aa		4.12	□□□□□ -1.75
NUP35-208	ENST00000472844	HRNR	Q86YZ3	2850 aa	Predicted RBP	4.12	□□□□□ -1.75
NUP35-208	ENST00000472844	ARHGAP32	A7KAX9	2087 aa		4.11	□□□□□ -1.75
NUP35-208	ENST00000472844	IGLV3-32	A0A0A0MS00	114 aa		4.11	□□□□□ -1.75
NUP35-208	ENST00000472844	ELOF1	P60002	83 aa	Known RBP	4.11	□□□□□ -1.75
NUP35-208	ENST00000472844	CSAG1	Q6PB30	78 aa		4.11	□□□□□ -1.75
NUP35-208	ENST00000472844	DMAC1	Q96GE9	116 aa		4.11	□□□□□ -1.75
NUP35-208	ENST00000472844	GNG13	Q9P2W3	67 aa		4.11	□□□□□ -1.75
NUP35-208	ENST00000472844	DOCK10	Q96BY6	2186 aa		4.11	□□□□□ -1.75
NUP35-208	ENST00000472844	ABCA1	O95477	2261 aa		4.11	□□□□□ -1.75
NUP35-208	ENST00000472844	IGKV2D-30	A0A075B6S6	120 aa		4.1	□□□□□ -1.75
NUP35-208	ENST00000472844	C2orf70	A6NJV1	201 aa		4.1	□□□□□ -1.75
NUP35-208	ENST00000472844	HCRT	O43612	131 aa		4.1	□□□□□ -1.75
NUP35-208	ENST00000472844	C1orf137	Q5JT78	98 aa		4.1	□□□□□ -1.75
NUP35-208	ENST00000472844	C9orf163	Q8N9P6	203 aa		4.1	□□□□□ -1.75
NUP35-208	ENST00000472844	FDCSP	Q8NFU4	85 aa		4.1	□□□□□ -1.75
NUP35-208	ENST00000472844	PSENEN	Q9NZ42	101 aa		4.1	□□□□□ -1.75
NUP35-208	ENST00000472844	HERC2	O95714	4834 aa		4.1	□□□□□ -1.75
NUP35-208	ENST00000472844	LOC101927531	A0A1B0GV80	90 aa		4.09	□□□□□ -1.75
NUP35-208	ENST00000472844	RTL8C	O15255	209 aa		4.09	□□□□□ -1.75
NUP35-208	ENST00000472844	HMGA2	P52926	109 aa		4.09	□□□□□ -1.75
NUP35-208	ENST00000472844	SPINT4	Q6UDR6	99 aa		4.09	□□□□□ -1.75
NUP35-208	ENST00000472844	NDUFA4L2	Q9NRX3	87 aa		4.09	□□□□□ -1.75
NUP35-208	ENST00000472844	TRBV6-7	A0A0A0MS04	114 aa		4.08	□□□□□ -1.76
NUP35-208	ENST00000472844	SPTY2D1-AS1	A0A0U1RR47	76 aa		4.08	□□□□□ -1.76
NUP35-208	ENST00000472844	HIGD1C	A8MV81	97 aa		4.08	□□□□□ -1.76
NUP35-208	ENST00000472844	SAA2	P0DJI9	122 aa	Predicted RBP	4.08	□□□□□ -1.76
NUP35-208	ENST00000472844	IFI27	P40305	119 aa	Predicted RBP	4.08	□□□□□ -1.76
NUP35-208	ENST00000472844	C4orf3	Q8WVX3	66 aa		4.08	□□□□□ -1.76
NUP35-208	ENST00000472844	MRPL36	Q9P0J6	103 aa	Known RBP	4.08	□□□□□ -1.76
NUP35-208	ENST00000472844	LENEP	Q9Y5L5	61 aa		4.08	□□□□□ -1.76
NUP35-208	ENST00000472844	TRBV6-8	A0A0A6YYG3	113 aa		4.07	□□□□□ -1.76
NUP35-208	ENST00000472844		H3BVH4	76 aa		4.07	□□□□□ -1.76
NUP35-208	ENST00000472844	HMGN4	O00479	90 aa		4.07	□□□□□ -1.76
NUP35-208	ENST00000472844	PDE6H	Q13956	83 aa		4.07	□□□□□ -1.76
NUP35-208	ENST00000472844	ATP5EP2	Q5VTU8	51 aa		4.07	□□□□□ -1.76
NUP35-208	ENST00000472844		Q9BRP9	147 aa		4.07	□□□□□ -1.76
NUP35-208	ENST00000472844	FAM103A1	Q9BTL3	118 aa	Known RBP	4.07	□□□□□ -1.76
NUP35-208	ENST00000472844	PSORS1C2	Q9UIG4	136 aa		4.07	□□□□□ -1.76
NUP35-208	ENST00000472844	ANKRD36	A6QL64	1941 aa		4.06	□□□□□ -1.76
NUP35-208	ENST00000472844	NUPR2	A6NF83	97 aa		4.06	□□□□□ -1.76
NUP35-208	ENST00000472844		A8MU10	97 aa		4.06	□□□□□ -1.76
NUP35-208	ENST00000472844	LEPROTL1	O95214	131 aa		4.06	□□□□□ -1.76
NUP35-208	ENST00000472844	PRR14L	Q5THK1	2151 aa		4.06	□□□□□ -1.76
NUP35-208	ENST00000472844	UBR4	Q5T4S7	5183 aa		4.05	□□□□□ -1.76
NUP35-208	ENST00000472844	LINC00612	Q8N6U2	182 aa		4.05	□□□□□ -1.76
NUP35-208	ENST00000472844	PROK2	Q9HC23	129 aa		4.05	□□□□□ -1.76
NUP35-208	ENST00000472844	ORMDL1	Q9P0S3	153 aa		4.05	□□□□□ -1.76
NUP35-208	ENST00000472844	TP53TG3	Q9ULZ0	132 aa		4.05	□□□□□ -1.76
NUP35-208	ENST00000472844	CR1	P17927	2039 aa		4.05	□□□□□ -1.76
NUP35-208	ENST00000472844	TENM1	Q9UKZ4	2725 aa		4.05	□□□□□ -1.76
NUP35-208	ENST00000472844	DYNC2H1	Q8NCM8	4307 aa	Known RBP	4.04	□□□□□ -1.76
NUP35-208	ENST00000472844	SPTB	P11277	2137 aa		4.04	□□□□□ -1.76
NUP35-208	ENST00000472844	ARMS2	P0C7Q2	107 aa		4.04	□□□□□ -1.76
NUP35-208	ENST00000472844	SPINT3	P49223	89 aa		4.04	□□□□□ -1.76
NUP35-208	ENST00000472844	CNBP	P62633	177 aa	Known RBP	4.04	□□□□□ -1.76
NUP35-208	ENST00000472844		R4GN34	69 aa		4.04	□□□□□ -1.76
NUP35-208	ENST00000472844	SSBP1	Q04837	148 aa	Known RBP	4.03	□□□□□ -1.76
NUP35-208	ENST00000472844	PRO2289	Q9P1D8	64 aa		4.03	□□□□□ -1.76
NUP35-208	ENST00000472844	UBE2D4	Q9Y2X8	147 aa		4.03	□□□□□ -1.76
NUP35-208	ENST00000472844	CAD	P27708	2225 aa		4.02	□□□□□ -1.77
NUP35-208	ENST00000472844	FREM1	Q5H8C1	2179 aa		4.02	□□□□□ -1.77
NUP35-208	ENST00000472844		D6R8Y8	96 aa		4.02	□□□□□ -1.77
NUP35-208	ENST00000472844	PPP1R17	O96001	155 aa		4.02	□□□□□ -1.77
NUP35-208	ENST00000472844	SLPI	P03973	132 aa		4.02	□□□□□ -1.77
NUP35-208	ENST00000472844	SPAG11B	Q08648	103 aa		4.02	□□□□□ -1.77
NUP35-208	ENST00000472844	SPAG11A	Q6PDA7	123 aa		4.02	□□□□□ -1.77
NUP35-208	ENST00000472844		Q6ZTI0	123 aa		4.02	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms