RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 PAPPA-AS1Q5QFB9 102 aa4.69□□□□□ -1.66
USP48-207ENST00000471752 UQCC3Q6UW78 93 aa4.69□□□□□ -1.66
USP48-207ENST00000471752 FA2HQ7L5A8 372 aa4.69□□□□□ -1.66
USP48-207ENST00000471752 C18orf32Q8TCD1 76 aa4.69□□□□□ -1.66
USP48-207ENST00000471752 SND1-IT1Q9HBX3 110 aa4.69□□□□□ -1.66
USP48-207ENST00000471752 RPS10P5Q9NQ39 176 aa4.69□□□□□ -1.66
USP48-207ENST00000471752 A0A0U1RRA0 63 aa4.68□□□□□ -1.66
USP48-207ENST00000471752 CRYGAP11844 174 aa4.68□□□□□ -1.66
USP48-207ENST00000471752 RPL13AP40429 203 aaKnown RBP4.68□□□□□ -1.66
USP48-207ENST00000471752 CXCL5P42830 114 aa4.68□□□□□ -1.66
USP48-207ENST00000471752 RPL28P46779 137 aaKnown RBP4.68□□□□□ -1.66
USP48-207ENST00000471752 KRTAP5-3Q6L8H2 238 aa4.68□□□□□ -1.66
USP48-207ENST00000471752 C3orf22Q8N5N4 141 aa4.68□□□□□ -1.66
USP48-207ENST00000471752 TYMSOSQ8TAI1 123 aa4.68□□□□□ -1.66
USP48-207ENST00000471752 M0R378 163 aa4.67□□□□□ -1.66
USP48-207ENST00000471752 LINC00614P0C842 121 aa4.66□□□□□ -1.66
USP48-207ENST00000471752 S100PP25815 95 aa4.66□□□□□ -1.66
USP48-207ENST00000471752 G0S2P27469 103 aa4.66□□□□□ -1.66
USP48-207ENST00000471752 UBE2AP49459 152 aa4.66□□□□□ -1.66
USP48-207ENST00000471752 BAGE3Q86Y29 109 aa4.66□□□□□ -1.66
USP48-207ENST00000471752 NKAPP1Q8N9T2 125 aa4.66□□□□□ -1.66
USP48-207ENST00000471752 PLEKHB2Q96CS7 222 aa4.66□□□□□ -1.66
USP48-207ENST00000471752 KRTAP4-11Q9BYQ6 195 aa4.66□□□□□ -1.66
USP48-207ENST00000471752 TMEM126AQ9H061 195 aa4.66□□□□□ -1.66
USP48-207ENST00000471752 SMCO4Q9NRQ5 59 aa4.66□□□□□ -1.66
USP48-207ENST00000471752 ERG28Q9UKR5 140 aa4.66□□□□□ -1.66
USP48-207ENST00000471752 TRAPPC1Q9Y5R8 145 aa4.66□□□□□ -1.66
USP48-207ENST00000471752 H3BS24 57 aa4.65□□□□□ -1.67
USP48-207ENST00000471752 ATP5LO75964 103 aa4.65□□□□□ -1.67
USP48-207ENST00000471752 FAM19A1Q7Z5A9 133 aa4.65□□□□□ -1.67
USP48-207ENST00000471752 YPEL4Q96NS1 127 aa4.65□□□□□ -1.67
USP48-207ENST00000471752 H3BRM9 83 aa4.64□□□□□ -1.67
USP48-207ENST00000471752 HBDP02042 147 aa4.64□□□□□ -1.67
USP48-207ENST00000471752 TMEM170BQ5T4T1 132 aa4.64□□□□□ -1.67
USP48-207ENST00000471752 KRTAP9-8Q9BYQ0 159 aa4.64□□□□□ -1.67
USP48-207ENST00000471752 KRTAP9-7A8MTY7 169 aa4.63□□□□□ -1.67
USP48-207ENST00000471752 APOC3P02656 99 aa4.63□□□□□ -1.67
USP48-207ENST00000471752 SMIM13P0DJ93 91 aa4.63□□□□□ -1.67
USP48-207ENST00000471752 LINC00304Q8N9R0 145 aa4.63□□□□□ -1.67
USP48-207ENST00000471752 TMEM223A0PJW6 202 aa4.62□□□□□ -1.67
USP48-207ENST00000471752 LINC00158P58513 81 aa4.62□□□□□ -1.67
USP48-207ENST00000471752 RHEBQ15382 184 aa4.62□□□□□ -1.67
USP48-207ENST00000471752 FAM229BQ4G0N7 80 aa4.62□□□□□ -1.67
USP48-207ENST00000471752 CBLN2Q8IUK8 224 aa4.62□□□□□ -1.67
USP48-207ENST00000471752 FAM19A2Q8N3H0 131 aa4.62□□□□□ -1.67
USP48-207ENST00000471752 DAND5Q8N907 189 aa4.62□□□□□ -1.67
USP48-207ENST00000471752 HIGD2AQ9BW72 106 aa4.62□□□□□ -1.67
USP48-207ENST00000471752 CHTOPQ9Y3Y2 248 aaKnown RBP4.62□□□□□ -1.67
USP48-207ENST00000471752 LINC00310P59036 64 aa4.61□□□□□ -1.67
USP48-207ENST00000471752 TSPEAR-AS2P59090 65 aa4.61□□□□□ -1.67
USP48-207ENST00000471752 COX19Q49B96 90 aa4.61□□□□□ -1.67
USP48-207ENST00000471752 KRTAP4-1Q9BYQ7 146 aa4.61□□□□□ -1.67
USP48-207ENST00000471752 PPDPFQ9H3Y8 114 aa4.61□□□□□ -1.67
USP48-207ENST00000471752 IGLV7-46A0A075B6I9 117 aa4.6□□□□□ -1.67
USP48-207ENST00000471752 IGKV2D-26A0A0A0MRZ7 120 aa4.6□□□□□ -1.67
USP48-207ENST00000471752 LINC01549A6NIU2 74 aa4.6□□□□□ -1.67
USP48-207ENST00000471752 NCR3O14931 201 aa4.6□□□□□ -1.67
USP48-207ENST00000471752 ERC2-IT1O76042 136 aa4.6□□□□□ -1.67
USP48-207ENST00000471752 SPRR4Q96PI1 79 aa4.6□□□□□ -1.67
USP48-207ENST00000471752 KRTAP4-16G5E9R7 235 aaPredicted RBP4.59□□□□□ -1.67
USP48-207ENST00000471752 RPL24P83731 157 aaKnown RBP4.59□□□□□ -1.67
USP48-207ENST00000471752 COX17Q14061 63 aa4.59□□□□□ -1.67
USP48-207ENST00000471752 LCE5AQ5TCM9 118 aa4.59□□□□□ -1.67
USP48-207ENST00000471752 MIR7-3HGQ8N6C7 128 aa4.59□□□□□ -1.67
USP48-207ENST00000471752 SMCR5Q8TEV8 140 aa4.59□□□□□ -1.67
USP48-207ENST00000471752 TRBV10-3A0A0K0K1G6 114 aa4.58□□□□□ -1.68
USP48-207ENST00000471752 BOD1L2Q8IYS8 172 aa4.58□□□□□ -1.68
USP48-207ENST00000471752 IFI27L1Q96BM0 104 aa4.58□□□□□ -1.68
USP48-207ENST00000471752 PMCHL2Q9BQD1 86 aa4.58□□□□□ -1.68
USP48-207ENST00000471752 TRAV12-1A0A0B4J245 112 aa4.57□□□□□ -1.68
USP48-207ENST00000471752 H0Y8G0 127 aa4.57□□□□□ -1.68
USP48-207ENST00000471752 SPRR1AP35321 89 aa4.56□□□□□ -1.68
USP48-207ENST00000471752 Q8NBF4 154 aa4.56□□□□□ -1.68
USP48-207ENST00000471752 CDIP1Q9H305 208 aa4.56□□□□□ -1.68
USP48-207ENST00000471752 NDUFA12Q9UI09 145 aa4.56□□□□□ -1.68
USP48-207ENST00000471752 SNAPINO95295 136 aa4.55□□□□□ -1.68
USP48-207ENST00000471752 TRGC2P03986 189 aa4.55□□□□□ -1.68
USP48-207ENST00000471752 TPRXLQ17RH7 258 aa4.55□□□□□ -1.68
USP48-207ENST00000471752 MEIG1Q5JSS6 88 aa4.55□□□□□ -1.68
USP48-207ENST00000471752 CHCHD1Q96BP2 118 aaKnown RBP4.55□□□□□ -1.68
USP48-207ENST00000471752 Q9BRP9 147 aa4.55□□□□□ -1.68
USP48-207ENST00000471752 KCNQ1DNQ9H478 68 aa4.55□□□□□ -1.68
USP48-207ENST00000471752 B5MCH6 92 aa4.54□□□□□ -1.68
USP48-207ENST00000471752 SERF1AO75920 110 aa4.54□□□□□ -1.68
USP48-207ENST00000471752 KRTAP13-3Q3SY46 172 aa4.54□□□□□ -1.68
USP48-207ENST00000471752 ADAMTSL4-AS1Q5T5F5 129 aa4.54□□□□□ -1.68
USP48-207ENST00000471752 GAGE2AQ6NT46 116 aa4.54□□□□□ -1.68
USP48-207ENST00000471752 SOSTDC1Q6X4U4 206 aa4.54□□□□□ -1.68
USP48-207ENST00000471752 SLC7A5P1Q8MH63 180 aa4.54□□□□□ -1.68
USP48-207ENST00000471752 SVBPQ8N300 66 aa4.54□□□□□ -1.68
USP48-207ENST00000471752 PRYO14603 147 aa4.53□□□□□ -1.68
USP48-207ENST00000471752 FABP4P15090 132 aa4.53□□□□□ -1.68
USP48-207ENST00000471752 NPC2P61916 151 aa4.53□□□□□ -1.68
USP48-207ENST00000471752 LINC00337Q8N6G1 96 aa4.53□□□□□ -1.68
USP48-207ENST00000471752 IGLV9-49A0A0B4J1Y8 123 aa4.52□□□□□ -1.69
USP48-207ENST00000471752 LEPROTO15243 131 aa4.52□□□□□ -1.69
USP48-207ENST00000471752 ATP6V1G1O75348 118 aa4.52□□□□□ -1.69
USP48-207ENST00000471752 LINC00483Q53H64 154 aa4.52□□□□□ -1.69
USP48-207ENST00000471752 ST20-AS1Q8NBB2 130 aa4.52□□□□□ -1.69
USP48-207ENST00000471752 LOC107984156A0A0G2JMH3 177 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms