RNA–Protein interactions for RNA: ENST00000471697.1

SCN3A-207, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-207ENST00000471697 TTTY12Q9BZ98 90 aa1.89□□□□□ -2.11
SCN3A-207ENST00000471697 KCNQ1DNQ9H478 68 aa1.89□□□□□ -2.11
SCN3A-207ENST00000471697 PDE4DIPQ5VU43 2346 aa1.89□□□□□ -2.11
SCN3A-207ENST00000471697 NDUFA4O00483 81 aa1.88□□□□□ -2.11
SCN3A-207ENST00000471697 MRPL33O75394 65 aaKnown RBP1.88□□□□□ -2.11
SCN3A-207ENST00000471697 IGKV3-15P01624 115 aa1.88□□□□□ -2.11
SCN3A-207ENST00000471697 HRES1P13985 223 aa1.88□□□□□ -2.11
SCN3A-207ENST00000471697 Q6ZTI0 123 aa1.88□□□□□ -2.11
SCN3A-207ENST00000471697 SZT2Q5T011 3432 aa1.88□□□□□ -2.11
SCN3A-207ENST00000471697 SDK1Q7Z5N4 2213 aa1.88□□□□□ -2.11
SCN3A-207ENST00000471697 COL4A2P08572 1712 aa1.88□□□□□ -2.11
SCN3A-207ENST00000471697 CACNA1CQ13936 2221 aa1.87□□□□□ -2.11
SCN3A-207ENST00000471697 TNRC6CQ9HCJ0 1690 aaKnown RBP1.87□□□□□ -2.11
SCN3A-207ENST00000471697 IGKV3-7A0A075B6H7 116 aa1.87□□□□□ -2.11
SCN3A-207ENST00000471697 TRGV2A0A075B6R0 118 aa1.87□□□□□ -2.11
SCN3A-207ENST00000471697 SSC5DA1L4H1 1573 aa1.87□□□□□ -2.11
SCN3A-207ENST00000471697 DEFB112Q30KQ8 113 aa1.87□□□□□ -2.11
SCN3A-207ENST00000471697 CCL26Q9Y258 94 aa1.87□□□□□ -2.11
SCN3A-207ENST00000471697 BRWD1Q9NSI6 2320 aa1.86□□□□□ -2.11
SCN3A-207ENST00000471697 NDUFA1O15239 70 aa1.86□□□□□ -2.11
SCN3A-207ENST00000471697 RNASE3P12724 160 aaKnown RBP1.86□□□□□ -2.11
SCN3A-207ENST00000471697 DSCR10P59022 87 aa1.86□□□□□ -2.11
SCN3A-207ENST00000471697 DEFB132Q7Z7B7 95 aa1.86□□□□□ -2.11
SCN3A-207ENST00000471697 KRTAP11-1Q8IUC1 163 aa1.86□□□□□ -2.11
SCN3A-207ENST00000471697 Q8N9L7 120 aa1.86□□□□□ -2.11
SCN3A-207ENST00000471697 LINC00308Q8TCZ7 52 aa1.86□□□□□ -2.11
SCN3A-207ENST00000471697 PATE1Q8WXA2 126 aa1.86□□□□□ -2.11
SCN3A-207ENST00000471697 TTTY10Q9BZA0 68 aa1.86□□□□□ -2.11
SCN3A-207ENST00000471697 CACNA1GO43497 2377 aa1.86□□□□□ -2.11
SCN3A-207ENST00000471697 GOLGB1Q14789 3259 aaKnown RBP1.85□□□□□ -2.11
SCN3A-207ENST00000471697 ZFHX2Q9C0A1 2572 aaPredicted RBP1.85□□□□□ -2.11
SCN3A-207ENST00000471697 MED13LQ71F56 2210 aa1.85□□□□□ -2.11
SCN3A-207ENST00000471697 NCR3O14931 201 aa1.85□□□□□ -2.11
SCN3A-207ENST00000471697 SPINK7P58062 85 aa1.85□□□□□ -2.11
SCN3A-207ENST00000471697 KRTAP12-2P59991 146 aa1.85□□□□□ -2.11
SCN3A-207ENST00000471697 COA5Q86WW8 74 aa1.85□□□□□ -2.11
SCN3A-207ENST00000471697 BAHCC1Q9P281 2608 aa1.85□□□□□ -2.11
SCN3A-207ENST00000471697 COL6A3P12111 3177 aa1.84□□□□□ -2.11
SCN3A-207ENST00000471697 SPTBN5Q9NRC6 3674 aaKnown RBP1.84□□□□□ -2.11
SCN3A-207ENST00000471697 IGLV3-1P01715 115 aa1.84□□□□□ -2.11
SCN3A-207ENST00000471697 IGKV4-1P06312 121 aa1.84□□□□□ -2.11
SCN3A-207ENST00000471697 TPRXLQ17RH7 258 aa1.84□□□□□ -2.11
SCN3A-207ENST00000471697 DEFB134Q4QY38 66 aa1.84□□□□□ -2.11
SCN3A-207ENST00000471697 KNTC1P50748 2209 aa1.84□□□□□ -2.11
SCN3A-207ENST00000471697 GPR179Q6PRD1 2367 aa1.84□□□□□ -2.12
SCN3A-207ENST00000471697 CADP27708 2225 aa1.83□□□□□ -2.12
SCN3A-207ENST00000471697 SORL1Q92673 2214 aa1.83□□□□□ -2.12
SCN3A-207ENST00000471697 BPTFQ12830 3046 aa1.83□□□□□ -2.12
SCN3A-207ENST00000471697 IGLV4-60A0A075B6I1 120 aa1.83□□□□□ -2.12
SCN3A-207ENST00000471697 DEFB131BA0A096LNP1 70 aa1.83□□□□□ -2.12
SCN3A-207ENST00000471697 IGKV3OR2-268A0A0C4DH90 116 aa1.83□□□□□ -2.12
SCN3A-207ENST00000471697 COX7BP24311 80 aa1.83□□□□□ -2.12
SCN3A-207ENST00000471697 SPINK14Q6IE38 97 aa1.83□□□□□ -2.12
SCN3A-207ENST00000471697 SPACA4Q8TDM5 124 aa1.83□□□□□ -2.12
SCN3A-207ENST00000471697 F5P12259 2224 aa1.83□□□□□ -2.12
SCN3A-207ENST00000471697 ZFHX3Q15911 3703 aa1.82□□□□□ -2.12
SCN3A-207ENST00000471697 IGKV2-40A0A087WW87 121 aaPredicted RBP1.82□□□□□ -2.12
SCN3A-207ENST00000471697 TRGV1A0A0A0MS02 117 aa1.82□□□□□ -2.12
SCN3A-207ENST00000471697 A0A0G2JQZ4 141 aa1.82□□□□□ -2.12
SCN3A-207ENST00000471697 LINC00959A0A1B0GUT2 108 aa1.82□□□□□ -2.12
SCN3A-207ENST00000471697 IGKV2-29A2NJV5 120 aaPredicted RBP1.82□□□□□ -2.12
SCN3A-207ENST00000471697 IGKV2D-40P01614 121 aaPredicted RBP1.82□□□□□ -2.12
SCN3A-207ENST00000471697 DEFB106AQ8N104 65 aa1.82□□□□□ -2.12
SCN3A-207ENST00000471697 ZFHX4Q86UP3 3567 aa1.82□□□□□ -2.12
SCN3A-207ENST00000471697 IGKV2D-24A0A075B6R9 120 aa1.81□□□□□ -2.12
SCN3A-207ENST00000471697 KRTAP1-4P0C5Y4 121 aa1.81□□□□□ -2.12
SCN3A-207ENST00000471697 CRIP1P50238 77 aa1.81□□□□□ -2.12
SCN3A-207ENST00000471697 POLR2KP53803 58 aaKnown RBP1.81□□□□□ -2.12
SCN3A-207ENST00000471697 SMIM11BQ8TCY0 68 aa1.81□□□□□ -2.12
SCN3A-207ENST00000471697 VCANP13611 3396 aa1.81□□□□□ -2.12
SCN3A-207ENST00000471697 RTTNQ86VV8 2226 aa1.81□□□□□ -2.12
SCN3A-207ENST00000471697 URB1O60287 2271 aaKnown RBP1.8□□□□□ -2.12
SCN3A-207ENST00000471697 KMT2BQ9UMN6 2715 aaPredicted RBP1.8□□□□□ -2.12
SCN3A-207ENST00000471697 A0A1B0GU69 56 aa1.8□□□□□ -2.12
SCN3A-207ENST00000471697 TRBV6-4A0A1B0GX49 114 aa1.8□□□□□ -2.12
SCN3A-207ENST00000471697 A0A1W2PNN7 141 aa1.8□□□□□ -2.12
SCN3A-207ENST00000471697 H3BSH0 61 aa1.8□□□□□ -2.12
SCN3A-207ENST00000471697 LINC00158P58513 81 aa1.8□□□□□ -2.12
SCN3A-207ENST00000471697 ANAPC11Q9NYG5 84 aa1.8□□□□□ -2.12
SCN3A-207ENST00000471697 USF3Q68DE3 2245 aa1.8□□□□□ -2.12
SCN3A-207ENST00000471697 PRCDQ00LT1 54 aa1.79□□□□□ -2.12
SCN3A-207ENST00000471697 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.78□□□□□ -2.12
SCN3A-207ENST00000471697 KRTAP13-2Q52LG2 175 aa1.78□□□□□ -2.12
SCN3A-207ENST00000471697 C10orf55Q5SWW7 151 aa1.78□□□□□ -2.12
SCN3A-207ENST00000471697 LINC00472Q9H8W2 130 aa1.78□□□□□ -2.12
SCN3A-207ENST00000471697 AHCTF1Q8WYP5 2266 aa1.78□□□□□ -2.13
SCN3A-207ENST00000471697 ASXL3Q9C0F0 2248 aa1.78□□□□□ -2.13
SCN3A-207ENST00000471697 UNC80Q8N2C7 3258 aa1.78□□□□□ -2.13
SCN3A-207ENST00000471697 COL4A4P53420 1690 aaPredicted RBP1.77□□□□□ -2.13
SCN3A-207ENST00000471697 A0A087WTM6 91 aa1.77□□□□□ -2.13
SCN3A-207ENST00000471697 CCL22O00626 93 aa1.77□□□□□ -2.13
SCN3A-207ENST00000471697 ACYP2P14621 99 aa1.77□□□□□ -2.13
SCN3A-207ENST00000471697 PIGYQ3MUY2 71 aa1.77□□□□□ -2.13
SCN3A-207ENST00000471697 LINC00575Q6W349 94 aa1.77□□□□□ -2.13
SCN3A-207ENST00000471697 Q6ZQY7 126 aa1.77□□□□□ -2.13
SCN3A-207ENST00000471697 Q8IZM0 81 aa1.77□□□□□ -2.13
SCN3A-207ENST00000471697 TRANK1O15050 2925 aa1.77□□□□□ -2.13
SCN3A-207ENST00000471697 PTPRQQ9UMZ3 2332 aa1.76□□□□□ -2.13
SCN3A-207ENST00000471697 MUC3AQ02505 3323 aa1.76□□□□□ -2.13
SCN3A-207ENST00000471697 NBDYA0A0U1RRE5 68 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms