RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 HERV-K104P63124 156 aa9.55□□□□□ -0.88
COL27A1-203ENST00000468565 MIAQ16674 131 aa9.55□□□□□ -0.88
COL27A1-203ENST00000468565 ABCA13Q86UQ4 5058 aa9.54□□□□□ -0.88
COL27A1-203ENST00000468565 TRBV20-1A0A075B6N2 111 aa9.54□□□□□ -0.88
COL27A1-203ENST00000468565 IGKV2D-24A0A075B6R9 120 aa9.54□□□□□ -0.88
COL27A1-203ENST00000468565 IGLV5-39A0A0G2JS06 123 aa9.54□□□□□ -0.88
COL27A1-203ENST00000468565 PRSS2P07478 247 aa9.54□□□□□ -0.88
COL27A1-203ENST00000468565 PSMB2P49721 201 aa9.54□□□□□ -0.88
COL27A1-203ENST00000468565 CRPP02741 224 aa9.54□□□□□ -0.88
COL27A1-203ENST00000468565 XGP55808 180 aa9.54□□□□□ -0.88
COL27A1-203ENST00000468565 CIRBPQ14011 172 aaKnown RBP9.54□□□□□ -0.88
COL27A1-203ENST00000468565 Q6Q795 121 aa9.54□□□□□ -0.88
COL27A1-203ENST00000468565 ZNF561-AS1K7EIQ3 104 aa9.53□□□□□ -0.88
COL27A1-203ENST00000468565 ANGP03950 147 aaKnown RBP9.53□□□□□ -0.88
COL27A1-203ENST00000468565 ENHOQ6UWT2 76 aa9.53□□□□□ -0.88
COL27A1-203ENST00000468565 SCGB1C2P0DMR2 95 aa9.52□□□□□ -0.88
COL27A1-203ENST00000468565 IFITM1P13164 125 aa9.52□□□□□ -0.88
COL27A1-203ENST00000468565 SFTA2Q6UW10 78 aa9.52□□□□□ -0.88
COL27A1-203ENST00000468565 SMIM1B2RUZ4 78 aa9.52□□□□□ -0.89
COL27A1-203ENST00000468565 MT-ATP8P03928 68 aa9.52□□□□□ -0.89
COL27A1-203ENST00000468565 ADAMTSL4-AS1Q5T5F5 129 aa9.52□□□□□ -0.89
COL27A1-203ENST00000468565 C1orf43Q9BWL3 253 aa9.52□□□□□ -0.89
COL27A1-203ENST00000468565 DNAH8Q96JB1 4490 aa9.51□□□□□ -0.89
COL27A1-203ENST00000468565 M0QXV9 152 aa9.51□□□□□ -0.89
COL27A1-203ENST00000468565 LECT2O14960 151 aa9.51□□□□□ -0.89
COL27A1-203ENST00000468565 PRR34Q9NV39 138 aa9.51□□□□□ -0.89
COL27A1-203ENST00000468565 B5MCH6 92 aa9.5□□□□□ -0.89
COL27A1-203ENST00000468565 Q1RN00 199 aa9.5□□□□□ -0.89
COL27A1-203ENST00000468565 TEN1Q86WV5 123 aa9.5□□□□□ -0.89
COL27A1-203ENST00000468565 TMEM126AQ9H061 195 aa9.5□□□□□ -0.89
COL27A1-203ENST00000468565 COPS9Q8WXC6 57 aa9.5□□□□□ -0.89
COL27A1-203ENST00000468565 A0A1B0GUV1 79 aa9.48□□□□□ -0.89
COL27A1-203ENST00000468565 H7C2G1 150 aa9.48□□□□□ -0.89
COL27A1-203ENST00000468565 TCL1BO95988 128 aa9.48□□□□□ -0.89
COL27A1-203ENST00000468565 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.48□□□□□ -0.89
COL27A1-203ENST00000468565 LINC00269Q8N2A0 174 aa9.48□□□□□ -0.89
COL27A1-203ENST00000468565 GAGE2BQ13066 116 aa9.47□□□□□ -0.89
COL27A1-203ENST00000468565 GAGE2EQ4V326 116 aa9.47□□□□□ -0.89
COL27A1-203ENST00000468565 C14orf177Q52M58 125 aa9.47□□□□□ -0.89
COL27A1-203ENST00000468565 GAGE2DQ9UEU5 116 aa9.47□□□□□ -0.89
COL27A1-203ENST00000468565 EPM2AB3EWF7 344 aa9.46□□□□□ -0.89
COL27A1-203ENST00000468565 NPC2P61916 151 aa9.46□□□□□ -0.89
COL27A1-203ENST00000468565 SMIM20Q8N5G0 67 aa9.46□□□□□ -0.89
COL27A1-203ENST00000468565 FAT1Q14517 4588 aa9.46□□□□□ -0.89
COL27A1-203ENST00000468565 IGLV4-60A0A075B6I1 120 aa9.46□□□□□ -0.9
COL27A1-203ENST00000468565 TRBV30A0A0K0K1B3 111 aa9.46□□□□□ -0.9
COL27A1-203ENST00000468565 NDUFV3P56181 108 aaKnown RBP9.46□□□□□ -0.9
COL27A1-203ENST00000468565 MEIG1Q5JSS6 88 aa9.46□□□□□ -0.9
COL27A1-203ENST00000468565 CLPSL2Q6UWE3 100 aa9.46□□□□□ -0.9
COL27A1-203ENST00000468565 ZNF625Q96I27 306 aaPredicted RBP9.46□□□□□ -0.9
COL27A1-203ENST00000468565 SNCGO76070 127 aa9.45□□□□□ -0.9
COL27A1-203ENST00000468565 REG3AQ06141 175 aa9.45□□□□□ -0.9
COL27A1-203ENST00000468565 IGKV3OR2-268A0A0C4DH90 116 aa9.44□□□□□ -0.9
COL27A1-203ENST00000468565 KRTAP26-1Q6PEX3 210 aa9.44□□□□□ -0.9
COL27A1-203ENST00000468565 Q6ZSA8 131 aa9.44□□□□□ -0.9
COL27A1-203ENST00000468565 LINC00308Q8TCZ7 52 aa9.44□□□□□ -0.9
COL27A1-203ENST00000468565 TRAV8-4A0A0B4J246 113 aa9.44□□□□□ -0.9
COL27A1-203ENST00000468565 ATXN8Q156A1 80 aa9.44□□□□□ -0.9
COL27A1-203ENST00000468565 DAND5Q8N907 189 aa9.44□□□□□ -0.9
COL27A1-203ENST00000468565 COX7B2Q8TF08 81 aa9.44□□□□□ -0.9
COL27A1-203ENST00000468565 FAM30AQ9NZY2 134 aa9.44□□□□□ -0.9
COL27A1-203ENST00000468565 COX6CP09669 75 aa9.43□□□□□ -0.9
COL27A1-203ENST00000468565 USP17L23D6RBM5 183 aa9.43□□□□□ -0.9
COL27A1-203ENST00000468565 PPDPFQ9H3Y8 114 aa9.43□□□□□ -0.9
COL27A1-203ENST00000468565 TRIAP1O43715 76 aa9.42□□□□□ -0.9
COL27A1-203ENST00000468565 Q5VSD8 79 aa9.42□□□□□ -0.9
COL27A1-203ENST00000468565 IGHV3OR16-9A0A0B4J2B5 98 aa9.41□□□□□ -0.9
COL27A1-203ENST00000468565 LINC00959A0A1B0GUT2 108 aa9.41□□□□□ -0.9
COL27A1-203ENST00000468565 RPL13AP40429 203 aaKnown RBP9.41□□□□□ -0.9
COL27A1-203ENST00000468565 HAMPP81172 84 aa9.41□□□□□ -0.9
COL27A1-203ENST00000468565 C5orf47Q569G3 176 aa9.41□□□□□ -0.9
COL27A1-203ENST00000468565 A0A087WZ39 114 aa9.41□□□□□ -0.9
COL27A1-203ENST00000468565 A0A0U1RRA0 63 aa9.41□□□□□ -0.9
COL27A1-203ENST00000468565 H3BS24 57 aa9.41□□□□□ -0.9
COL27A1-203ENST00000468565 SS18Q15532 418 aa9.41□□□□□ -0.9
COL27A1-203ENST00000468565 VPS13BQ7Z7G8 4022 aa9.4□□□□□ -0.9
COL27A1-203ENST00000468565 IGLV10-54A0A075B6I4 117 aa9.4□□□□□ -0.9
COL27A1-203ENST00000468565 C9JAW5 83 aa9.4□□□□□ -0.9
COL27A1-203ENST00000468565 SMR3BP02814 79 aaPredicted RBP9.4□□□□□ -0.9
COL27A1-203ENST00000468565 TOMM7Q9P0U1 55 aa9.4□□□□□ -0.9
COL27A1-203ENST00000468565 LINC01620Q4KN68 170 aa9.39□□□□□ -0.91
COL27A1-203ENST00000468565 SLC25A20O43772 301 aa9.39□□□□□ -0.91
COL27A1-203ENST00000468565 CARD19Q96LW7 228 aa9.38□□□□□ -0.91
COL27A1-203ENST00000468565 SOSTDC1Q6X4U4 206 aa9.37□□□□□ -0.91
COL27A1-203ENST00000468565 C5orf38Q86SI9 138 aa9.37□□□□□ -0.91
COL27A1-203ENST00000468565 LINC01600Q96MT4 127 aa9.37□□□□□ -0.91
COL27A1-203ENST00000468565 LINC01561Q8N1V8 128 aa9.37□□□□□ -0.91
COL27A1-203ENST00000468565 ANKRD29Q8N6D5 301 aa9.36□□□□□ -0.91
COL27A1-203ENST00000468565 INAFM2P0DMQ5 153 aa9.35□□□□□ -0.91
COL27A1-203ENST00000468565 TRBV10-2A0A0K0K1G8 114 aa9.35□□□□□ -0.91
COL27A1-203ENST00000468565 CCDC179H3BU77 68 aa9.35□□□□□ -0.91
COL27A1-203ENST00000468565 XCL1P47992 114 aa9.35□□□□□ -0.91
COL27A1-203ENST00000468565 SCXQ7RTU7 201 aa9.35□□□□□ -0.91
COL27A1-203ENST00000468565 C9orf163Q8N9P6 203 aa9.35□□□□□ -0.91
COL27A1-203ENST00000468565 LINC00158P58513 81 aa9.34□□□□□ -0.91
COL27A1-203ENST00000468565 CNBPP62633 177 aaKnown RBP9.34□□□□□ -0.91
COL27A1-203ENST00000468565 MIR7-3HGQ8N6C7 128 aa9.34□□□□□ -0.91
COL27A1-203ENST00000468565 LST1O00453 97 aa9.33□□□□□ -0.92
COL27A1-203ENST00000468565 C6orf226Q5I0X4 101 aa9.33□□□□□ -0.92
COL27A1-203ENST00000468565 CHCHD10Q8WYQ3 142 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 189.5 ms