RNA–Protein interactions for RNA: ENST00000467514.1

PRPF3-203, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 3

Gene PRPF3, Length 1,097 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-203ENST00000467514 PPDPFQ9H3Y8 114 aa7.17□□□□□ -1.26
PRPF3-203ENST00000467514 EIF4EBP3O60516 100 aaPredicted RBP7.16□□□□□ -1.26
PRPF3-203ENST00000467514 SMIM13P0DJ93 91 aa7.16□□□□□ -1.26
PRPF3-203ENST00000467514 IFITM1P13164 125 aa7.15□□□□□ -1.26
PRPF3-203ENST00000467514 CKS1BP61024 79 aa7.15□□□□□ -1.26
PRPF3-203ENST00000467514 CIRBPQ14011 172 aaKnown RBP7.15□□□□□ -1.26
PRPF3-203ENST00000467514 C10orf25Q5T742 122 aa7.15□□□□□ -1.26
PRPF3-203ENST00000467514 CFAP161Q6P656 301 aa7.15□□□□□ -1.26
PRPF3-203ENST00000467514 MUSTN1Q8IVN3 82 aa7.15□□□□□ -1.26
PRPF3-203ENST00000467514 C2orf48Q96LS8 159 aa7.15□□□□□ -1.26
PRPF3-203ENST00000467514 ERG28Q9UKR5 140 aa7.15□□□□□ -1.26
PRPF3-203ENST00000467514 COX11Q9Y6N1 276 aa7.15□□□□□ -1.26
PRPF3-203ENST00000467514 LRP1Q07954 4544 aaKnown RBP7.15□□□□□ -1.27
PRPF3-203ENST00000467514 F8WDY8 70 aa7.14□□□□□ -1.27
PRPF3-203ENST00000467514 MEIG1Q5JSS6 88 aa7.14□□□□□ -1.27
PRPF3-203ENST00000467514 UNQ6190/PRO20217Q6UXQ8 127 aa7.14□□□□□ -1.27
PRPF3-203ENST00000467514 SOSTDC1Q6X4U4 206 aa7.14□□□□□ -1.27
PRPF3-203ENST00000467514 LINC00308Q8TCZ7 52 aa7.14□□□□□ -1.27
PRPF3-203ENST00000467514 LINC00526Q96FQ7 95 aa7.14□□□□□ -1.27
PRPF3-203ENST00000467514 A6NDN8 102 aa7.13□□□□□ -1.27
PRPF3-203ENST00000467514 TAX1BP3O14907 124 aa7.13□□□□□ -1.27
PRPF3-203ENST00000467514 HIGD2BQ4VC39 106 aa7.13□□□□□ -1.27
PRPF3-203ENST00000467514 DAND5Q8N907 189 aa7.13□□□□□ -1.27
PRPF3-203ENST00000467514 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.12□□□□□ -1.27
PRPF3-203ENST00000467514 LOC107984156A0A0G2JMH3 177 aa7.12□□□□□ -1.27
PRPF3-203ENST00000467514 A0A0U1RRA0 63 aa7.12□□□□□ -1.27
PRPF3-203ENST00000467514 A4D1N5 150 aa7.12□□□□□ -1.27
PRPF3-203ENST00000467514 LRCOL1A6NCL2 159 aa7.12□□□□□ -1.27
PRPF3-203ENST00000467514 USP17L23D6RBM5 183 aa7.12□□□□□ -1.27
PRPF3-203ENST00000467514 COX17Q14061 63 aa7.12□□□□□ -1.27
PRPF3-203ENST00000467514 ARL17AQ8IVW1 177 aa7.12□□□□□ -1.27
PRPF3-203ENST00000467514 MIR7-3HGQ8N6C7 128 aa7.12□□□□□ -1.27
PRPF3-203ENST00000467514 C6orf48Q9UBA6 75 aa7.12□□□□□ -1.27
PRPF3-203ENST00000467514 FAT3Q8TDW7 4589 aa7.12□□□□□ -1.27
PRPF3-203ENST00000467514 DNAH8Q96JB1 4490 aa7.11□□□□□ -1.27
PRPF3-203ENST00000467514 TRBV30A0A0K0K1B3 111 aa7.11□□□□□ -1.27
PRPF3-203ENST00000467514 TMEM238LA0A1B0GVL6 79 aa7.11□□□□□ -1.27
PRPF3-203ENST00000467514 A6NJY4 79 aa7.11□□□□□ -1.27
PRPF3-203ENST00000467514 ZNF561-AS1K7EIQ3 104 aa7.11□□□□□ -1.27
PRPF3-203ENST00000467514 K7ERJ3 54 aa7.11□□□□□ -1.27
PRPF3-203ENST00000467514 CFC1BP0CG36 223 aa7.11□□□□□ -1.27
PRPF3-203ENST00000467514 CFC1P0CG37 223 aa7.11□□□□□ -1.27
PRPF3-203ENST00000467514 LINC00158P58513 81 aa7.11□□□□□ -1.27
PRPF3-203ENST00000467514 NHP2Q9NX24 153 aaKnown RBP7.11□□□□□ -1.27
PRPF3-203ENST00000467514 RNF213Q63HN8 5207 aa7.1□□□□□ -1.27
PRPF3-203ENST00000467514 SLPIP03973 132 aa7.1□□□□□ -1.27
PRPF3-203ENST00000467514 PFN2P35080 140 aa7.1□□□□□ -1.27
PRPF3-203ENST00000467514 RPL24P83731 157 aaKnown RBP7.1□□□□□ -1.27
PRPF3-203ENST00000467514 WFDC2Q14508 124 aa7.1□□□□□ -1.27
PRPF3-203ENST00000467514 C9orf116Q5BN46 136 aaPredicted RBP7.1□□□□□ -1.27
PRPF3-203ENST00000467514 SCXQ7RTU7 201 aa7.1□□□□□ -1.27
PRPF3-203ENST00000467514 A0A0B4J2C4 111 aa7.09□□□□□ -1.27
PRPF3-203ENST00000467514 LECT2O14960 151 aa7.09□□□□□ -1.27
PRPF3-203ENST00000467514 RNF151Q2KHN1 245 aa7.09□□□□□ -1.27
PRPF3-203ENST00000467514 Q6ZRU5 148 aa7.09□□□□□ -1.27
PRPF3-203ENST00000467514 CAMK2N2Q96S95 79 aa7.09□□□□□ -1.27
PRPF3-203ENST00000467514 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.08□□□□□ -1.28
PRPF3-203ENST00000467514 NPC2P61916 151 aa7.08□□□□□ -1.28
PRPF3-203ENST00000467514 SYCNQ0VAF6 134 aa7.08□□□□□ -1.28
PRPF3-203ENST00000467514 Q6ZSA8 131 aa7.08□□□□□ -1.28
PRPF3-203ENST00000467514 COPS9Q8WXC6 57 aa7.08□□□□□ -1.28
PRPF3-203ENST00000467514 LINC01620Q4KN68 170 aa7.07□□□□□ -1.28
PRPF3-203ENST00000467514 SND1-IT1Q9HBX3 110 aa7.07□□□□□ -1.28
PRPF3-203ENST00000467514 A0A1B0GV90 55 aa7.06□□□□□ -1.28
PRPF3-203ENST00000467514 C9orf118A6NHY6 69 aa7.06□□□□□ -1.28
PRPF3-203ENST00000467514 RPL37AP61513 92 aaKnown RBP7.06□□□□□ -1.28
PRPF3-203ENST00000467514 PRO1854Q9UHT4 67 aa7.06□□□□□ -1.28
PRPF3-203ENST00000467514 TLX1NBP0CAT3 122 aa7.05□□□□□ -1.28
PRPF3-203ENST00000467514 Q8NDZ9 215 aa7.05□□□□□ -1.28
PRPF3-203ENST00000467514 RAB37Q96AX2 223 aa7.05□□□□□ -1.28
PRPF3-203ENST00000467514 CARD19Q96LW7 228 aa7.05□□□□□ -1.28
PRPF3-203ENST00000467514 IGKV2-28A0A075B6P5 120 aa7.04□□□□□ -1.28
PRPF3-203ENST00000467514 NDUFC2-KCTD14E9PQ53 114 aa7.04□□□□□ -1.28
PRPF3-203ENST00000467514 TSPAN13O95857 204 aa7.04□□□□□ -1.28
PRPF3-203ENST00000467514 IGKV2D-28P01615 120 aa7.04□□□□□ -1.28
PRPF3-203ENST00000467514 CNBPP62633 177 aaKnown RBP7.04□□□□□ -1.28
PRPF3-203ENST00000467514 NDUFC2O95298 119 aa7.03□□□□□ -1.28
PRPF3-203ENST00000467514 C14orf177Q52M58 125 aa7.03□□□□□ -1.28
PRPF3-203ENST00000467514 CIRBP-AS1Q8TBR5 109 aa7.03□□□□□ -1.28
PRPF3-203ENST00000467514 H3BUT2 72 aa7.02□□□□□ -1.29
PRPF3-203ENST00000467514 Q6ZRP5 223 aa7.02□□□□□ -1.29
PRPF3-203ENST00000467514 LINC00337Q8N6G1 96 aa7.02□□□□□ -1.29
PRPF3-203ENST00000467514 NAA38Q9BRA0 125 aaKnown RBP7.02□□□□□ -1.29
PRPF3-203ENST00000467514 A0A1W2PPM0 123 aa7.01□□□□□ -1.29
PRPF3-203ENST00000467514 PKHD1L1Q86WI1 4243 aa7.01□□□□□ -1.29
PRPF3-203ENST00000467514 LRP2P98164 4655 aa7□□□□□ -1.29
PRPF3-203ENST00000467514 KRTAP10-4P60372 401 aaPredicted RBP7□□□□□ -1.29
PRPF3-203ENST00000467514 TRAV13-2A0A0B4J235 113 aa6.99□□□□□ -1.29
PRPF3-203ENST00000467514 RPL13AP40429 203 aaKnown RBP6.99□□□□□ -1.29
PRPF3-203ENST00000467514 C9orf129Q5T035 196 aaKnown RBP6.99□□□□□ -1.29
PRPF3-203ENST00000467514 XAGE1AQ9HD64 81 aa6.99□□□□□ -1.29
PRPF3-203ENST00000467514 VPREB1P12018 145 aa6.98□□□□□ -1.29
PRPF3-203ENST00000467514 PRR3P79522 188 aaKnown RBP6.98□□□□□ -1.29
PRPF3-203ENST00000467514 TRBV10-2A0A0K0K1G8 114 aa6.97□□□□□ -1.29
PRPF3-203ENST00000467514 LOC107984640A0A0U1RRK4 108 aa6.97□□□□□ -1.29
PRPF3-203ENST00000467514 SMCPP49901 116 aaPredicted RBP6.97□□□□□ -1.29
PRPF3-203ENST00000467514 TRIAP1O43715 76 aa6.96□□□□□ -1.3
PRPF3-203ENST00000467514 FABP2P12104 132 aa6.96□□□□□ -1.3
PRPF3-203ENST00000467514 GAGE2EQ4V326 116 aa6.96□□□□□ -1.3
PRPF3-203ENST00000467514 C9orf163Q8N9P6 203 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 183.1 ms