RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 MRPL34Q9BQ48 92 aaKnown RBP-0.28□□□□□ -2.45
CCDC93-205ENST00000466171 LRRC37AA6NMS7 1700 aa-0.28□□□□□ -2.45
CCDC93-205ENST00000466171 C5P01031 1676 aa-0.28□□□□□ -2.45
CCDC93-205ENST00000466171 SHPRHQ149N8 1683 aa-0.28□□□□□ -2.45
CCDC93-205ENST00000466171 ABCC2Q92887 1545 aa-0.28□□□□□ -2.45
CCDC93-205ENST00000466171 NRXN1Q9ULB1 1477 aa-0.29□□□□□ -2.46
CCDC93-205ENST00000466171 COL6A3P12111 3177 aa-0.29□□□□□ -2.46
CCDC93-205ENST00000466171 TRBV7-7A0A0K0K1E9 115 aa-0.29□□□□□ -2.46
CCDC93-205ENST00000466171 HEPN1Q6WQI6 88 aa-0.29□□□□□ -2.46
CCDC93-205ENST00000466171 ZNF720Q7Z2F6 126 aa-0.29□□□□□ -2.46
CCDC93-205ENST00000466171 DNAJC13O75165 2243 aa-0.29□□□□□ -2.46
CCDC93-205ENST00000466171 ANKRD36A6QL64 1941 aa-0.3□□□□□ -2.46
CCDC93-205ENST00000466171 D6R8Y8 96 aa-0.3□□□□□ -2.46
CCDC93-205ENST00000466171 F8WEM9 126 aa-0.3□□□□□ -2.46
CCDC93-205ENST00000466171 LEPROTL1O95214 131 aa-0.3□□□□□ -2.46
CCDC93-205ENST00000466171 LINC00032P0C843 101 aa-0.3□□□□□ -2.46
CCDC93-205ENST00000466171 NCMAPQ5T1S8 102 aa-0.3□□□□□ -2.46
CCDC93-205ENST00000466171 MUSTN1Q8IVN3 82 aa-0.3□□□□□ -2.46
CCDC93-205ENST00000466171 DPY30Q9C005 99 aa-0.3□□□□□ -2.46
CCDC93-205ENST00000466171 PSENENQ9NZ42 101 aa-0.3□□□□□ -2.46
CCDC93-205ENST00000466171 FLNBO75369 2602 aaKnown RBP-0.3□□□□□ -2.46
CCDC93-205ENST00000466171 SRRM2Q9UQ35 2752 aaKnown RBP-0.3□□□□□ -2.46
CCDC93-205ENST00000466171 SETXQ7Z333 2677 aaKnown RBP-0.31□□□□□ -2.46
CCDC93-205ENST00000466171 CHD8Q9HCK8 2581 aa-0.31□□□□□ -2.46
CCDC93-205ENST00000466171 SAMD9Q5K651 1589 aa-0.31□□□□□ -2.46
CCDC93-205ENST00000466171 TENM2Q9NT68 2774 aa-0.31□□□□□ -2.46
CCDC93-205ENST00000466171 COL14A1Q05707 1796 aaKnown RBP-0.31□□□□□ -2.46
CCDC93-205ENST00000466171 CCL22O00626 93 aa-0.31□□□□□ -2.46
CCDC93-205ENST00000466171 DEFB112Q30KQ8 113 aa-0.31□□□□□ -2.46
CCDC93-205ENST00000466171 ACBD7Q8N6N7 88 aa-0.31□□□□□ -2.46
CCDC93-205ENST00000466171 ACANP16112 2415 aa-0.31□□□□□ -2.46
CCDC93-205ENST00000466171 KIAA1551Q9HCM1 1747 aa-0.31□□□□□ -2.46
CCDC93-205ENST00000466171 TEX14Q8IWB6 1497 aa-0.31□□□□□ -2.46
CCDC93-205ENST00000466171 CLTCQ00610 1675 aaKnown RBP-0.32□□□□□ -2.46
CCDC93-205ENST00000466171 IGLC2P0DOY2 106 aa-0.32□□□□□ -2.46
CCDC93-205ENST00000466171 IGLC3P0DOY3 106 aa-0.32□□□□□ -2.46
CCDC93-205ENST00000466171 LELP1Q5T871 98 aa-0.32□□□□□ -2.46
CCDC93-205ENST00000466171 FLGP20930 4061 aaPredicted RBP-0.32□□□□□ -2.46
CCDC93-205ENST00000466171 M0R143 59 aa-0.33□□□□□ -2.46
CCDC93-205ENST00000466171 HMGN3Q15651 99 aa-0.33□□□□□ -2.46
CCDC93-205ENST00000466171 C9orf62Q8N4C0 152 aa-0.33□□□□□ -2.46
CCDC93-205ENST00000466171 CLIP1P30622 1438 aa-0.34□□□□□ -2.46
CCDC93-205ENST00000466171 WFDC13Q8IUB5 93 aa-0.34□□□□□ -2.46
CCDC93-205ENST00000466171 CDKN2A-AS1Q9UH64 79 aa-0.34□□□□□ -2.46
CCDC93-205ENST00000466171 KIF20BQ96Q89 1820 aa-0.34□□□□□ -2.46
CCDC93-205ENST00000466171 CNOT1A5YKK6 2376 aaKnown RBP-0.34□□□□□ -2.46
CCDC93-205ENST00000466171 BCORQ6W2J9 1755 aa-0.34□□□□□ -2.46
CCDC93-205ENST00000466171 CRYBG1Q9Y4K1 1723 aa-0.35□□□□□ -2.47
CCDC93-205ENST00000466171 KRTAP6-2Q3LI66 62 aa-0.35□□□□□ -2.47
CCDC93-205ENST00000466171 ALKAL2Q6UX46 152 aa-0.35□□□□□ -2.47
CCDC93-205ENST00000466171 HIGD1BQ9P298 99 aa-0.35□□□□□ -2.47
CCDC93-205ENST00000466171 PDZD2O15018 2839 aa-0.35□□□□□ -2.47
CCDC93-205ENST00000466171 PKD1L3Q7Z443 1732 aa-0.35□□□□□ -2.47
CCDC93-205ENST00000466171 PCNX1Q96RV3 2341 aa-0.36□□□□□ -2.47
CCDC93-205ENST00000466171 CREBBPQ92793 2442 aa-0.36□□□□□ -2.47
CCDC93-205ENST00000466171 UBE2D4Q9Y2X8 147 aa-0.36□□□□□ -2.47
CCDC93-205ENST00000466171 MAP1AP78559 2803 aaPredicted RBP-0.36□□□□□ -2.47
CCDC93-205ENST00000466171 ABCC10Q5T3U5 1492 aa-0.36□□□□□ -2.47
CCDC93-205ENST00000466171 EPRSP07814 1512 aaKnown RBP-0.37□□□□□ -2.47
CCDC93-205ENST00000466171 SPRR2AP35326 72 aa-0.37□□□□□ -2.47
CCDC93-205ENST00000466171 PEA15Q15121 130 aa-0.37□□□□□ -2.47
CCDC93-205ENST00000466171 FANCAO15360 1455 aa-0.37□□□□□ -2.47
CCDC93-205ENST00000466171 ATP10BO94823 1461 aa-0.37□□□□□ -2.47
CCDC93-205ENST00000466171 SVEP1Q4LDE5 3571 aa-0.37□□□□□ -2.47
CCDC93-205ENST00000466171 LRRC7Q96NW7 1537 aa-0.38□□□□□ -2.47
CCDC93-205ENST00000466171 ANKRD26Q9UPS8 1709 aa-0.38□□□□□ -2.47
CCDC93-205ENST00000466171 H0YGG7 62 aa-0.38□□□□□ -2.47
CCDC93-205ENST00000466171 COX7BP24311 80 aa-0.38□□□□□ -2.47
CCDC93-205ENST00000466171 SMIM11AP58511 58 aa-0.38□□□□□ -2.47
CCDC93-205ENST00000466171 MAGI2Q86UL8 1455 aa-0.38□□□□□ -2.47
CCDC93-205ENST00000466171 RGPD2P0DJD1 1756 aa-0.38□□□□□ -2.47
CCDC93-205ENST00000466171 KMT2CQ8NEZ4 4911 aaKnown RBP-0.38□□□□□ -2.47
CCDC93-205ENST00000466171 PKD1P98161 4303 aa-0.39□□□□□ -2.47
CCDC93-205ENST00000466171 AKAP12Q02952 1782 aa-0.39□□□□□ -2.47
CCDC93-205ENST00000466171 PREX1Q8TCU6 1659 aa-0.39□□□□□ -2.47
CCDC93-205ENST00000466171 A0A1B0GUT8 65 aa-0.39□□□□□ -2.47
CCDC93-205ENST00000466171 IQCF6A8MYZ5 107 aa-0.39□□□□□ -2.47
CCDC93-205ENST00000466171 S100A8P05109 93 aa-0.39□□□□□ -2.47
CCDC93-205ENST00000466171 HMGN2P05204 90 aaKnown RBP-0.39□□□□□ -2.47
CCDC93-205ENST00000466171 RPL38P63173 70 aaKnown RBP-0.39□□□□□ -2.47
CCDC93-205ENST00000466171 KRTAP19-8Q3LI54 63 aa-0.39□□□□□ -2.47
CCDC93-205ENST00000466171 NMSQ5H8A3 153 aa-0.39□□□□□ -2.47
CCDC93-205ENST00000466171 GAFA1Q96PS6 74 aa-0.39□□□□□ -2.47
CCDC93-205ENST00000466171 C20orf78Q9BR46 151 aa-0.39□□□□□ -2.47
CCDC93-205ENST00000466171 SNHG12Q9BXW3 62 aa-0.39□□□□□ -2.47
CCDC93-205ENST00000466171 MYH4Q9Y623 1939 aa-0.39□□□□□ -2.47
CCDC93-205ENST00000466171 NBEAL1Q6ZS30 2694 aa-0.39□□□□□ -2.47
CCDC93-205ENST00000466171 STAB2Q8WWQ8 2551 aa-0.39□□□□□ -2.47
CCDC93-205ENST00000466171 QSER1Q2KHR3 1735 aa-0.39□□□□□ -2.47
CCDC93-205ENST00000466171 ALKQ9UM73 1620 aa-0.39□□□□□ -2.47
CCDC93-205ENST00000466171 UBR3Q6ZT12 1888 aa-0.39□□□□□ -2.47
CCDC93-205ENST00000466171 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.4□□□□□ -2.47
CCDC93-205ENST00000466171 LRRC9Q6ZRR7 1453 aa-0.4□□□□□ -2.47
CCDC93-205ENST00000466171 GYPAP02724 150 aa-0.4□□□□□ -2.47
CCDC93-205ENST00000466171 PKIAP61925 76 aa-0.4□□□□□ -2.47
CCDC93-205ENST00000466171 PLGLAQ15195 96 aa-0.4□□□□□ -2.47
CCDC93-205ENST00000466171 MYO3AQ8NEV4 1616 aa-0.4□□□□□ -2.47
CCDC93-205ENST00000466171 SETD2Q9BYW2 2564 aaPredicted RBP-0.4□□□□□ -2.47
CCDC93-205ENST00000466171 VPS8Q8N3P4 1428 aa-0.4□□□□□ -2.47
CCDC93-205ENST00000466171 PCLOQ9Y6V0 5065 aa-0.4□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms