RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 FAT1Q14517 4588 aa-0.59□□□□□ -2.5
NUCKS1-202ENST00000464938 CREBBPQ92793 2442 aa-0.59□□□□□ -2.5
NUCKS1-202ENST00000464938 PTPN23Q9H3S7 1636 aa-0.6□□□□□ -2.5
NUCKS1-202ENST00000464938 RAPGEF2Q9Y4G8 1499 aa-0.6□□□□□ -2.5
NUCKS1-202ENST00000464938 C20orf202A1L168 122 aa-0.6□□□□□ -2.51
NUCKS1-202ENST00000464938 I3L3M4 83 aa-0.6□□□□□ -2.51
NUCKS1-202ENST00000464938 C9orf62Q8N4C0 152 aa-0.6□□□□□ -2.51
NUCKS1-202ENST00000464938 TRGV9Q99603 122 aa-0.6□□□□□ -2.51
NUCKS1-202ENST00000464938 MRPL34Q9BQ48 92 aaKnown RBP-0.6□□□□□ -2.51
NUCKS1-202ENST00000464938 VAMP8Q9BV40 100 aa-0.6□□□□□ -2.51
NUCKS1-202ENST00000464938 ABCC2Q92887 1545 aa-0.6□□□□□ -2.51
NUCKS1-202ENST00000464938 ANKRD36BQ8N2N9 1353 aa-0.6□□□□□ -2.51
NUCKS1-202ENST00000464938 NF1P21359 2839 aa-0.6□□□□□ -2.51
NUCKS1-202ENST00000464938 C5P01031 1676 aa-0.61□□□□□ -2.51
NUCKS1-202ENST00000464938 GNGT2O14610 69 aa-0.61□□□□□ -2.51
NUCKS1-202ENST00000464938 MT-ATP8P03928 68 aa-0.61□□□□□ -2.51
NUCKS1-202ENST00000464938 PMCHL1Q16048 86 aa-0.61□□□□□ -2.51
NUCKS1-202ENST00000464938 DNAH6Q9C0G6 4158 aa-0.61□□□□□ -2.51
NUCKS1-202ENST00000464938 MON2Q7Z3U7 1717 aa-0.61□□□□□ -2.51
NUCKS1-202ENST00000464938 NBPF19A0A087WUL8 3843 aa-0.62□□□□□ -2.51
NUCKS1-202ENST00000464938 CCL22O00626 93 aa-0.62□□□□□ -2.51
NUCKS1-202ENST00000464938 ARMS2P0C7Q2 107 aa-0.62□□□□□ -2.51
NUCKS1-202ENST00000464938 LELP1Q5T871 98 aa-0.62□□□□□ -2.51
NUCKS1-202ENST00000464938 C14orf144Q96I85 54 aa-0.62□□□□□ -2.51
NUCKS1-202ENST00000464938 REV3LO60673 3130 aa-0.62□□□□□ -2.51
NUCKS1-202ENST00000464938 FYCO1Q9BQS8 1478 aa-0.62□□□□□ -2.51
NUCKS1-202ENST00000464938 PEG3Q9GZU2 1588 aa-0.62□□□□□ -2.51
NUCKS1-202ENST00000464938 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.63□□□□□ -2.514e-6■□□□□ 8
NUCKS1-202ENST00000464938 ANKRD36A6QL64 1941 aa-0.63□□□□□ -2.51
NUCKS1-202ENST00000464938 UQCRHP07919 91 aa-0.63□□□□□ -2.51
NUCKS1-202ENST00000464938 GNGT1P63211 74 aa-0.63□□□□□ -2.51
NUCKS1-202ENST00000464938 SERP2Q8N6R1 65 aa-0.63□□□□□ -2.51
NUCKS1-202ENST00000464938 TEX14Q8IWB6 1497 aa-0.63□□□□□ -2.51
NUCKS1-202ENST00000464938 FAT3Q8TDW7 4589 aa-0.64□□□□□ -2.51
NUCKS1-202ENST00000464938 MXRA5Q9NR99 2828 aa-0.64□□□□□ -2.51
NUCKS1-202ENST00000464938 TRAV30A0A087WSZ9 112 aa-0.64□□□□□ -2.51
NUCKS1-202ENST00000464938 TMEM218A2RU14 115 aa-0.64□□□□□ -2.51
NUCKS1-202ENST00000464938 ATOX1O00244 68 aa-0.64□□□□□ -2.51
NUCKS1-202ENST00000464938 S100PP25815 95 aa-0.64□□□□□ -2.51
NUCKS1-202ENST00000464938 DEFB112Q30KQ8 113 aa-0.64□□□□□ -2.51
NUCKS1-202ENST00000464938 PMCHL2Q9BQD1 86 aa-0.64□□□□□ -2.51
NUCKS1-202ENST00000464938 EPRSP07814 1512 aaKnown RBP-0.64□□□□□ -2.51
NUCKS1-202ENST00000464938 CLIP1P30622 1438 aa-0.64□□□□□ -2.51
NUCKS1-202ENST00000464938 SONP18583 2426 aaKnown RBP-0.65□□□□□ -2.51
NUCKS1-202ENST00000464938 KNL1Q8NG31 2342 aa-0.65□□□□□ -2.51
NUCKS1-202ENST00000464938 SPTBN4Q9H254 2564 aa-0.65□□□□□ -2.51
NUCKS1-202ENST00000464938 AKAP13Q12802 2813 aa-0.65□□□□□ -2.51
NUCKS1-202ENST00000464938 TRBV7-7A0A0K0K1E9 115 aa-0.65□□□□□ -2.51
NUCKS1-202ENST00000464938 HMGN3Q15651 99 aa-0.65□□□□□ -2.51
NUCKS1-202ENST00000464938 LYSTQ99698 3801 aa-0.65□□□□□ -2.51
NUCKS1-202ENST00000464938 DNAH9Q9NYC9 4486 aa-0.66□□□□□ -2.51
NUCKS1-202ENST00000464938 FANCAO15360 1455 aa-0.66□□□□□ -2.51
NUCKS1-202ENST00000464938 CICQ96RK0 1608 aaPredicted RBP-0.66□□□□□ -2.51
NUCKS1-202ENST00000464938 ALKQ9UM73 1620 aa-0.66□□□□□ -2.51
NUCKS1-202ENST00000464938 SPTY2D1-AS1A0A0U1RR47 76 aa-0.66□□□□□ -2.52
NUCKS1-202ENST00000464938 NBASA2RRP1 2371 aa-0.66□□□□□ -2.52
NUCKS1-202ENST00000464938 CNTLNQ9NXG0 1405 aa-0.66□□□□□ -2.52
NUCKS1-202ENST00000464938 STARD9Q9P2P6 4700 aa-0.66□□□□□ -2.52
NUCKS1-202ENST00000464938 QSER1Q2KHR3 1735 aa-0.67□□□□□ -2.52
NUCKS1-202ENST00000464938 CRYBG1Q9Y4K1 1723 aa-0.67□□□□□ -2.52
NUCKS1-202ENST00000464938 MAGI2Q86UL8 1455 aa-0.67□□□□□ -2.52
NUCKS1-202ENST00000464938 COL14A1Q05707 1796 aaKnown RBP-0.67□□□□□ -2.52
NUCKS1-202ENST00000464938 BCORQ6W2J9 1755 aa-0.67□□□□□ -2.52
NUCKS1-202ENST00000464938 PREX1Q8TCU6 1659 aa-0.67□□□□□ -2.52
NUCKS1-202ENST00000464938 PKHD1L1Q86WI1 4243 aa-0.67□□□□□ -2.52
NUCKS1-202ENST00000464938 IGLC2P0DOY2 106 aa-0.67□□□□□ -2.52
NUCKS1-202ENST00000464938 IGLC3P0DOY3 106 aa-0.67□□□□□ -2.52
NUCKS1-202ENST00000464938 WFDC13Q8IUB5 93 aa-0.67□□□□□ -2.52
NUCKS1-202ENST00000464938 TCEAL7Q9BRU2 100 aa-0.67□□□□□ -2.52
NUCKS1-202ENST00000464938 PSENENQ9NZ42 101 aa-0.67□□□□□ -2.52
NUCKS1-202ENST00000464938 CDKN2A-AS1Q9UH64 79 aa-0.67□□□□□ -2.52
NUCKS1-202ENST00000464938 EPG5Q9HCE0 2579 aa-0.67□□□□□ -2.52
NUCKS1-202ENST00000464938 CLTCQ00610 1675 aaKnown RBP-0.68□□□□□ -2.52
NUCKS1-202ENST00000464938 HERC2O95714 4834 aa-0.68□□□□□ -2.52
NUCKS1-202ENST00000464938 S100A10P60903 97 aa-0.68□□□□□ -2.52
NUCKS1-202ENST00000464938 ETDBQ3ZM63 59 aa-0.68□□□□□ -2.52
NUCKS1-202ENST00000464938 ALKAL2Q6UX46 152 aa-0.68□□□□□ -2.52
NUCKS1-202ENST00000464938 DNAH3Q8TD57 4116 aa-0.68□□□□□ -2.52
NUCKS1-202ENST00000464938 HIGD1BQ9P298 99 aa-0.68□□□□□ -2.52
NUCKS1-202ENST00000464938 UBE2D4Q9Y2X8 147 aa-0.68□□□□□ -2.52
NUCKS1-202ENST00000464938 HECTD1Q9ULT8 2610 aa-0.68□□□□□ -2.52
NUCKS1-202ENST00000464938 TRANK1O15050 2925 aa-0.69□□□□□ -2.52
NUCKS1-202ENST00000464938 F8WEM9 126 aa-0.69□□□□□ -2.52
NUCKS1-202ENST00000464938 LINC00032P0C843 101 aa-0.69□□□□□ -2.52
NUCKS1-202ENST00000464938 KRTAP20-2Q3LI61 65 aa-0.69□□□□□ -2.52
NUCKS1-202ENST00000464938 HEPN1Q6WQI6 88 aa-0.69□□□□□ -2.52
NUCKS1-202ENST00000464938 SPRR2FQ96RM1 72 aa-0.69□□□□□ -2.52
NUCKS1-202ENST00000464938 AP4S1Q9Y587 144 aa-0.69□□□□□ -2.52
NUCKS1-202ENST00000464938 UBR4Q5T4S7 5183 aa-0.69□□□□□ -2.52
NUCKS1-202ENST00000464938 PKD1L3Q7Z443 1732 aa-0.69□□□□□ -2.52
NUCKS1-202ENST00000464938 KIF20BQ96Q89 1820 aa-0.7□□□□□ -2.52
NUCKS1-202ENST00000464938 ATP6V1G2-DDX39BF2Z307 99 aa-0.7□□□□□ -2.52
NUCKS1-202ENST00000464938 RBP2P50120 134 aa-0.7□□□□□ -2.52
NUCKS1-202ENST00000464938 ZNF720Q7Z2F6 126 aa-0.7□□□□□ -2.52
NUCKS1-202ENST00000464938 ACBD7Q8N6N7 88 aa-0.7□□□□□ -2.52
NUCKS1-202ENST00000464938 DPY30Q9C005 99 aa-0.7□□□□□ -2.52
NUCKS1-202ENST00000464938 AKAP9Q99996 3911 aa-0.7□□□□□ -2.52
NUCKS1-202ENST00000464938 RGPD2P0DJD1 1756 aa-0.7□□□□□ -2.52
NUCKS1-202ENST00000464938 SPG11Q96JI7 2443 aa-0.7□□□□□ -2.52
NUCKS1-202ENST00000464938 MUC17Q685J3 4493 aa-0.71□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms