RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 IGKV3OR2-268A0A0C4DH90 116 aa2.51□□□□□ -2.01
COL8A1-205ENST00000463753 LYRM9A8MSI8 78 aa2.51□□□□□ -2.01
COL8A1-205ENST00000463753 SERTAD4-AS1Q5TG53 156 aa2.51□□□□□ -2.01
COL8A1-205ENST00000463753 Q5VV11 94 aa2.51□□□□□ -2.01
COL8A1-205ENST00000463753 PRR15LQ9BU68 103 aa2.51□□□□□ -2.01
COL8A1-205ENST00000463753 CEP295Q9C0D2 2601 aa2.51□□□□□ -2.01
COL8A1-205ENST00000463753 MUC4Q99102 2169 aa2.5□□□□□ -2.01
COL8A1-205ENST00000463753 HIVEP1P15822 2718 aa2.5□□□□□ -2.01
COL8A1-205ENST00000463753 MUC3AQ02505 3323 aa2.5□□□□□ -2.01
COL8A1-205ENST00000463753 SMIM1B2RUZ4 78 aa2.5□□□□□ -2.01
COL8A1-205ENST00000463753 CD164L2Q6UWJ8 174 aa2.5□□□□□ -2.01
COL8A1-205ENST00000463753 C7orf65Q6ZTY9 151 aa2.5□□□□□ -2.01
COL8A1-205ENST00000463753 LCA10Q71F78 164 aa2.5□□□□□ -2.01
COL8A1-205ENST00000463753 SETD2Q9BYW2 2564 aaPredicted RBP2.5□□□□□ -2.01
COL8A1-205ENST00000463753 PCLOQ9Y6V0 5065 aa2.5□□□□□ -2.01
COL8A1-205ENST00000463753 A0A096LNT2 108 aa2.5□□□□□ -2.01
COL8A1-205ENST00000463753 LY6HO94772 140 aa2.5□□□□□ -2.01
COL8A1-205ENST00000463753 Q6ZQT0 140 aa2.5□□□□□ -2.01
COL8A1-205ENST00000463753 NKAPP1Q8N9T2 125 aa2.5□□□□□ -2.01
COL8A1-205ENST00000463753 BOD1L1Q8NFC6 3051 aa2.5□□□□□ -2.01
COL8A1-205ENST00000463753 ABCA4P78363 2273 aa2.5□□□□□ -2.01
COL8A1-205ENST00000463753 PSCAO43653 123 aa2.49□□□□□ -2.01
COL8A1-205ENST00000463753 CCL18P55774 89 aa2.49□□□□□ -2.01
COL8A1-205ENST00000463753 Q8N814 137 aa2.49□□□□□ -2.01
COL8A1-205ENST00000463753 LINC01006Q8NI28 216 aa2.49□□□□□ -2.01
COL8A1-205ENST00000463753 PRAC1Q96KF2 57 aa2.49□□□□□ -2.01
COL8A1-205ENST00000463753 COL12A1Q99715 3063 aa2.49□□□□□ -2.01
COL8A1-205ENST00000463753 A6NN06 94 aa2.49□□□□□ -2.01
COL8A1-205ENST00000463753 ATP6V0E1O15342 81 aa2.49□□□□□ -2.01
COL8A1-205ENST00000463753 VPREB1P12018 145 aa2.49□□□□□ -2.01
COL8A1-205ENST00000463753 PRR3P79522 188 aaKnown RBP2.49□□□□□ -2.01
COL8A1-205ENST00000463753 CXCL6P80162 114 aa2.49□□□□□ -2.01
COL8A1-205ENST00000463753 LINC00242Q5T6M2 205 aa2.49□□□□□ -2.01
COL8A1-205ENST00000463753 ATP11AUNQ6ZP68 121 aa2.49□□□□□ -2.01
COL8A1-205ENST00000463753 NTM-AS1Q6ZSK4 140 aa2.49□□□□□ -2.01
COL8A1-205ENST00000463753 DIRC1Q969H9 104 aa2.49□□□□□ -2.01
COL8A1-205ENST00000463753 LENEPQ9Y5L5 61 aa2.49□□□□□ -2.01
COL8A1-205ENST00000463753 ALMS1Q8TCU4 4167 aa2.49□□□□□ -2.01
COL8A1-205ENST00000463753 ACACAQ13085 2346 aa2.49□□□□□ -2.01
COL8A1-205ENST00000463753 LAMA5O15230 3695 aa2.49□□□□□ -2.01
COL8A1-205ENST00000463753 IGHV3OR16-12A0A075B7B8 117 aa2.49□□□□□ -2.01
COL8A1-205ENST00000463753 IGHV3-16A0A0C4DH30 117 aa2.49□□□□□ -2.01
COL8A1-205ENST00000463753 IGLV5-39A0A0G2JS06 123 aa2.49□□□□□ -2.01
COL8A1-205ENST00000463753 CHCHD7Q9BUK0 85 aa2.49□□□□□ -2.01
COL8A1-205ENST00000463753 A8MTW9 85 aa2.48□□□□□ -2.01
COL8A1-205ENST00000463753 PHF5AQ7RTV0 110 aaKnown RBP2.48□□□□□ -2.01
COL8A1-205ENST00000463753 PKDREJQ9NTG1 2253 aa2.48□□□□□ -2.01
COL8A1-205ENST00000463753 IGLV3-9A0A075B6K5 115 aa2.48□□□□□ -2.01
COL8A1-205ENST00000463753 ERC2-IT1O76042 136 aa2.48□□□□□ -2.01
COL8A1-205ENST00000463753 IGLV1-44P01699 117 aa2.48□□□□□ -2.01
COL8A1-205ENST00000463753 IGLV1-47P01700 117 aa2.48□□□□□ -2.01
COL8A1-205ENST00000463753 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.48□□□□□ -2.01
COL8A1-205ENST00000463753 SPTBN1Q01082 2364 aaKnown RBP2.48□□□□□ -2.01
COL8A1-205ENST00000463753 TRBV6-8A0A0A6YYG3 113 aa2.47□□□□□ -2.01
COL8A1-205ENST00000463753 G3V318 75 aa2.47□□□□□ -2.01
COL8A1-205ENST00000463753 PRM2P04554 102 aa2.47□□□□□ -2.01
COL8A1-205ENST00000463753 C9orf106Q8NAJ2 232 aa2.47□□□□□ -2.01
COL8A1-205ENST00000463753 OCR1Q9BZK8 76 aa2.47□□□□□ -2.01
COL8A1-205ENST00000463753 CUBNO60494 3623 aa2.47□□□□□ -2.01
COL8A1-205ENST00000463753 IGLV5-45A0A087WSX0 123 aa2.47□□□□□ -2.01
COL8A1-205ENST00000463753 SPINK13Q1W4C9 94 aa2.47□□□□□ -2.01
COL8A1-205ENST00000463753 Q8N9W7 124 aa2.47□□□□□ -2.01
COL8A1-205ENST00000463753 LINC01560Q8TB33 94 aa2.47□□□□□ -2.01
COL8A1-205ENST00000463753 C6orf99Q4VX62 202 aa2.46□□□□□ -2.01
COL8A1-205ENST00000463753 SMIM29Q86T20 159 aa2.46□□□□□ -2.01
COL8A1-205ENST00000463753 CR1P17927 2039 aa2.46□□□□□ -2.02
COL8A1-205ENST00000463753 TRBV6-4A0A1B0GX49 114 aa2.46□□□□□ -2.02
COL8A1-205ENST00000463753 LYNX1G3V0Z9 82 aa2.46□□□□□ -2.02
COL8A1-205ENST00000463753 LYNX1P0DP58 116 aa2.46□□□□□ -2.02
COL8A1-205ENST00000463753 ZFP36P26651 326 aaKnown RBP2.46□□□□□ -2.02
COL8A1-205ENST00000463753 C10orf25Q5T742 122 aa2.46□□□□□ -2.02
COL8A1-205ENST00000463753 LOC110117498A0A087WWA1 95 aa2.46□□□□□ -2.02
COL8A1-205ENST00000463753 LINC00313P59037 77 aa2.46□□□□□ -2.02
COL8A1-205ENST00000463753 LINC01554Q52M75 96 aa2.46□□□□□ -2.02
COL8A1-205ENST00000463753 MUC7Q8TAX7 377 aa2.46□□□□□ -2.02
COL8A1-205ENST00000463753 RNF5Q99942 180 aa2.46□□□□□ -2.02
COL8A1-205ENST00000463753 RYR2Q92736 4967 aa2.45□□□□□ -2.02
COL8A1-205ENST00000463753 ADGRG4Q8IZF6 3080 aa2.45□□□□□ -2.02
COL8A1-205ENST00000463753 IGLV4-60A0A075B6I1 120 aa2.45□□□□□ -2.02
COL8A1-205ENST00000463753 IGHV7-81A0A0B4J1V7 117 aa2.45□□□□□ -2.02
COL8A1-205ENST00000463753 KLLNB2CW77 178 aa2.45□□□□□ -2.02
COL8A1-205ENST00000463753 IGHV3-11P01762 117 aa2.45□□□□□ -2.02
COL8A1-205ENST00000463753 IGKV4-1P06312 121 aa2.45□□□□□ -2.02
COL8A1-205ENST00000463753 MOBPQ13875 183 aa2.45□□□□□ -2.02
COL8A1-205ENST00000463753 Q6ZQY7 126 aa2.45□□□□□ -2.02
COL8A1-205ENST00000463753 ADM2Q7Z4H4 148 aa2.45□□□□□ -2.02
COL8A1-205ENST00000463753 DPM3Q9P2X0 92 aa2.45□□□□□ -2.02
COL8A1-205ENST00000463753 DNAH6Q9C0G6 4158 aa2.45□□□□□ -2.02
COL8A1-205ENST00000463753 IGHV4-28A0A0C4DH34 117 aa2.45□□□□□ -2.02
COL8A1-205ENST00000463753 NPBQ8NG41 125 aa2.45□□□□□ -2.02
COL8A1-205ENST00000463753 LINC00167Q96N53 147 aa2.45□□□□□ -2.02
COL8A1-205ENST00000463753 B9D2Q9BPU9 175 aa2.45□□□□□ -2.02
COL8A1-205ENST00000463753 ZNF706Q9Y5V0 76 aaPredicted RBP2.45□□□□□ -2.02
COL8A1-205ENST00000463753 APCP25054 2843 aa2.44□□□□□ -2.02
COL8A1-205ENST00000463753 DNAJC9-AS1A6NH13 148 aa2.44□□□□□ -2.02
COL8A1-205ENST00000463753 HIGD2BQ4VC39 106 aa2.44□□□□□ -2.02
COL8A1-205ENST00000463753 C9orf116Q5BN46 136 aaPredicted RBP2.44□□□□□ -2.02
COL8A1-205ENST00000463753 LINC00612Q8N6U2 182 aa2.44□□□□□ -2.02
COL8A1-205ENST00000463753 Q8N9P0 234 aaPredicted RBP2.44□□□□□ -2.02
COL8A1-205ENST00000463753 LIMD2Q9BT23 127 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms