RNA–Protein interactions for RNA: ENST00000462731.1

SGCE-209, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-209ENST00000462731 COL4A4P53420 1690 aaPredicted RBP2.79□□□□□ -1.96
SGCE-209ENST00000462731 BAHCC1Q9P281 2608 aa2.79□□□□□ -1.96
SGCE-209ENST00000462731 TSC2P49815 1807 aa2.79□□□□□ -1.96
SGCE-209ENST00000462731 A0A1B0GUL6 1792 aa2.79□□□□□ -1.96
SGCE-209ENST00000462731 BCORQ6W2J9 1755 aa2.79□□□□□ -1.96
SGCE-209ENST00000462731 HAMPP81172 84 aa2.78□□□□□ -1.96
SGCE-209ENST00000462731 COL14A1Q05707 1796 aaKnown RBP2.78□□□□□ -1.96
SGCE-209ENST00000462731 SZT2Q5T011 3432 aa2.78□□□□□ -1.96
SGCE-209ENST00000462731 SSC5DA1L4H1 1573 aa2.78□□□□□ -1.96
SGCE-209ENST00000462731 PAPPA2Q9BXP8 1791 aa2.77□□□□□ -1.97
SGCE-209ENST00000462731 RICTORQ6R327 1708 aa2.77□□□□□ -1.97
SGCE-209ENST00000462731 RPL37P61927 97 aaKnown RBP2.77□□□□□ -1.97
SGCE-209ENST00000462731 ASCC3Q8N3C0 2202 aaKnown RBP2.77□□□□□ -1.97
SGCE-209ENST00000462731 ABCC6O95255 1503 aa2.77□□□□□ -1.97
SGCE-209ENST00000462731 BIVM-ERCC5R4GMW8 1640 aa2.75□□□□□ -1.97
SGCE-209ENST00000462731 UGGT1Q9NYU2 1555 aa2.75□□□□□ -1.97
SGCE-209ENST00000462731 F5P12259 2224 aa2.75□□□□□ -1.97
SGCE-209ENST00000462731 CACNA1CQ13936 2221 aa2.75□□□□□ -1.97
SGCE-209ENST00000462731 LY6G6CO95867 125 aa2.75□□□□□ -1.97
SGCE-209ENST00000462731 ABCA5Q8WWZ7 1642 aa2.75□□□□□ -1.97
SGCE-209ENST00000462731 NOTCH3Q9UM47 2321 aa2.74□□□□□ -1.97
SGCE-209ENST00000462731 PRB1P04280 392 aa2.74□□□□□ -1.97
SGCE-209ENST00000462731 KRTAP13-3Q3SY46 172 aa2.74□□□□□ -1.97
SGCE-209ENST00000462731 COL6A3P12111 3177 aa2.74□□□□□ -1.97
SGCE-209ENST00000462731 ENHOQ6UWT2 76 aa2.73□□□□□ -1.97
SGCE-209ENST00000462731 ABCC8Q09428 1581 aa2.73□□□□□ -1.97
SGCE-209ENST00000462731 SPTBN5Q9NRC6 3674 aaKnown RBP2.73□□□□□ -1.97
SGCE-209ENST00000462731 TOP2AP11388 1531 aaKnown RBP2.73□□□□□ -1.97
SGCE-209ENST00000462731 NOTCH2Q04721 2471 aa2.73□□□□□ -1.97
SGCE-209ENST00000462731 VCANP13611 3396 aa2.72□□□□□ -1.97
SGCE-209ENST00000462731 COX7BP24311 80 aa2.72□□□□□ -1.97
SGCE-209ENST00000462731 SSBP3-AS1Q7Z2R9 100 aa2.72□□□□□ -1.97
SGCE-209ENST00000462731 UBL5Q9BZL1 73 aa2.71□□□□□ -1.98
SGCE-209ENST00000462731 UNC80Q8N2C7 3258 aa2.71□□□□□ -1.98
SGCE-209ENST00000462731 A0A0G2JMZ2 1700 aa2.71□□□□□ -1.98
SGCE-209ENST00000462731 KRTAP5-8O75690 187 aa2.7□□□□□ -1.98
SGCE-209ENST00000462731 LCE3EQ5T5B0 92 aa2.7□□□□□ -1.98
SGCE-209ENST00000462731 FMN2Q9NZ56 1722 aa2.7□□□□□ -1.98
SGCE-209ENST00000462731 CACNA1BQ00975 2339 aa2.69□□□□□ -1.98
SGCE-209ENST00000462731 SLIT1O75093 1534 aa2.69□□□□□ -1.98
SGCE-209ENST00000462731 KRTAP12-1P59990 96 aa2.68□□□□□ -1.98
SGCE-209ENST00000462731 CROCC2H7BZ55 1655 aa2.67□□□□□ -1.98
SGCE-209ENST00000462731 IQGAP1P46940 1657 aa2.67□□□□□ -1.98
SGCE-209ENST00000462731 PIEZO1Q92508 2521 aa2.67□□□□□ -1.98
SGCE-209ENST00000462731 NDUFA4O00483 81 aa2.67□□□□□ -1.98
SGCE-209ENST00000462731 SETXQ7Z333 2677 aaKnown RBP2.66□□□□□ -1.98
SGCE-209ENST00000462731 MKI67P46013 3256 aaKnown RBP2.66□□□□□ -1.98
SGCE-209ENST00000462731 CHD8Q9HCK8 2581 aa2.65□□□□□ -1.98
SGCE-209ENST00000462731 MUC3AQ02505 3323 aa2.65□□□□□ -1.98
SGCE-209ENST00000462731 EFCAB6Q5THR3 1501 aa2.65□□□□□ -1.99
SGCE-209ENST00000462731 NCBP2-AS2Q69YL0 99 aa2.65□□□□□ -1.99
SGCE-209ENST00000462731 UBE2DNLQ8IWF7 75 aa2.65□□□□□ -1.99
SGCE-209ENST00000462731 ZFHX4Q86UP3 3567 aa2.65□□□□□ -1.99
SGCE-209ENST00000462731 MAST4O15021 2626 aa2.64□□□□□ -1.99
SGCE-209ENST00000462731 FCER1GP30273 86 aa2.64□□□□□ -1.99
SGCE-209ENST00000462731 KRTAP10-10P60014 251 aa2.64□□□□□ -1.99
SGCE-209ENST00000462731 NRAPQ86VF7 1730 aa2.64□□□□□ -1.99
SGCE-209ENST00000462731 TRANK1O15050 2925 aa2.64□□□□□ -1.99
SGCE-209ENST00000462731 CADP27708 2225 aa2.64□□□□□ -1.99
SGCE-209ENST00000462731 TRIOBPQ9H2D6 2365 aa2.64□□□□□ -1.99
SGCE-209ENST00000462731 TULP4Q9NRJ4 1543 aa2.63□□□□□ -1.99
SGCE-209ENST00000462731 LRRC37AA6NMS7 1700 aa2.63□□□□□ -1.99
SGCE-209ENST00000462731 DOT1LQ8TEK3 1739 aa2.63□□□□□ -1.99
SGCE-209ENST00000462731 RPL38P63173 70 aaKnown RBP2.63□□□□□ -1.99
SGCE-209ENST00000462731 DEPDC5O75140 1603 aa2.62□□□□□ -1.99
SGCE-209ENST00000462731 CPSF4LA6NMK7 179 aaKnown RBP2.62□□□□□ -1.99
SGCE-209ENST00000462731 DEFB119Q8N690 84 aa2.62□□□□□ -1.99
SGCE-209ENST00000462731 PLXNB2O15031 1838 aa2.61□□□□□ -1.99
SGCE-209ENST00000462731 K7EIL1 84 aa2.61□□□□□ -1.99
SGCE-209ENST00000462731 FXYD6P3P58550 94 aa2.61□□□□□ -1.99
SGCE-209ENST00000462731 LY75O60449 1722 aa2.61□□□□□ -1.99
SGCE-209ENST00000462731 ASXL3Q9C0F0 2248 aa2.61□□□□□ -1.99
SGCE-209ENST00000462731 TTC28Q96AY4 2481 aa2.61□□□□□ -1.99
SGCE-209ENST00000462731 EYSQ5T1H1 3165 aa2.61□□□□□ -1.99
SGCE-209ENST00000462731 LAMA2P24043 3122 aaKnown RBP2.6□□□□□ -1.99
SGCE-209ENST00000462731 TECTAO75443 2155 aa2.6□□□□□ -1.99
SGCE-209ENST00000462731 DEFB114Q30KQ6 69 aa2.6□□□□□ -1.99
SGCE-209ENST00000462731 ANKRD17O75179 2603 aaKnown RBP2.6□□□□□ -1.99
SGCE-209ENST00000462731 NAV2Q8IVL1 2488 aa2.6□□□□□ -1.99
SGCE-209ENST00000462731 QSER1Q2KHR3 1735 aa2.59□□□□□ -1.99
SGCE-209ENST00000462731 KRTAP6-3Q3LI67 103 aa2.59□□□□□ -1.99
SGCE-209ENST00000462731 LCE3AQ5TA76 89 aa2.59□□□□□ -1.99
SGCE-209ENST00000462731 NMES1Q9C002 83 aa2.59□□□□□ -1.99
SGCE-209ENST00000462731 KCNQ1DNQ9H478 68 aa2.59□□□□□ -1.99
SGCE-209ENST00000462731 BDP1A6H8Y1 2624 aa2.59□□□□□ -1.99
SGCE-209ENST00000462731 TOMM5Q8N4H5 51 aa2.58□□□□□ -2
SGCE-209ENST00000462731 FLG2Q5D862 2391 aaPredicted RBP2.58□□□□□ -2
SGCE-209ENST00000462731 FASNP49327 2511 aaKnown RBP2.58□□□□□ -2
SGCE-209ENST00000462731 ZNF462Q96JM2 2506 aa2.58□□□□□ -2
SGCE-209ENST00000462731 ANKRD11Q6UB99 2663 aaPredicted RBP2.57□□□□□ -2
SGCE-209ENST00000462731 CEP290O15078 2479 aa2.57□□□□□ -2
SGCE-209ENST00000462731 SPTY2D1-AS1A0A0U1RR47 76 aa2.57□□□□□ -2
SGCE-209ENST00000462731 ANGP03950 147 aaKnown RBP2.57□□□□□ -2
SGCE-209ENST00000462731 SERF2P84101 59 aa2.57□□□□□ -2
SGCE-209ENST00000462731 CMC2Q9NRP2 79 aa2.57□□□□□ -2
SGCE-209ENST00000462731 BRCA2P51587 3418 aa2.57□□□□□ -2
SGCE-209ENST00000462731 AGLP35573 1532 aa2.57□□□□□ -2
SGCE-209ENST00000462731 PRH1P02810 166 aa2.56□□□□□ -2
SGCE-209ENST00000462731 EPG5Q9HCE0 2579 aa2.56□□□□□ -2
SGCE-209ENST00000462731 K7EMI3 77 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms