RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 VPS13CQ709C8 3753 aa1.56□□□□□ -2.16
HPS3-203ENST00000460822 MAP1BP46821 2468 aaKnown RBP1.56□□□□□ -2.16
HPS3-203ENST00000460822 CACNA1HO95180 2353 aa1.56□□□□□ -2.16
HPS3-203ENST00000460822 IGHV3-64A0A075B6Q5 118 aa1.56□□□□□ -2.16
HPS3-203ENST00000460822 TRAV21A0A0B4J279 112 aa1.56□□□□□ -2.16
HPS3-203ENST00000460822 TRBV27A0A0K0K1C4 114 aa1.56□□□□□ -2.16
HPS3-203ENST00000460822 COX6CP09669 75 aa1.56□□□□□ -2.16
HPS3-203ENST00000460822 RNASE4P34096 147 aaKnown RBP1.56□□□□□ -2.16
HPS3-203ENST00000460822 RPS28P62857 69 aaKnown RBP1.56□□□□□ -2.16
HPS3-203ENST00000460822 LINC00304Q8N9R0 145 aa1.56□□□□□ -2.16
HPS3-203ENST00000460822 DEFB104AQ8WTQ1 72 aa1.56□□□□□ -2.16
HPS3-203ENST00000460822 LINC00526Q96FQ7 95 aa1.56□□□□□ -2.16
HPS3-203ENST00000460822 SPANXDQ9BXN6 97 aa1.56□□□□□ -2.16
HPS3-203ENST00000460822 SPANXCQ9NY87 97 aa1.56□□□□□ -2.16
HPS3-203ENST00000460822 KMT2BQ9UMN6 2715 aaPredicted RBP1.56□□□□□ -2.16
HPS3-203ENST00000460822 PTPRQQ9UMZ3 2332 aa1.55□□□□□ -2.16
HPS3-203ENST00000460822 IGKV2-24A0A0C4DH68 120 aa1.55□□□□□ -2.16
HPS3-203ENST00000460822 TRBV6-5A0A0K0K1A5 114 aa1.55□□□□□ -2.16
HPS3-203ENST00000460822 SPRR5A0A1B0GTR4 108 aa1.55□□□□□ -2.16
HPS3-203ENST00000460822 ODF3BA8MYP8 253 aa1.55□□□□□ -2.16
HPS3-203ENST00000460822 I3L3M4 83 aa1.55□□□□□ -2.16
HPS3-203ENST00000460822 TMEM256-PLSCR3K7ERE1 68 aa1.55□□□□□ -2.16
HPS3-203ENST00000460822 OVOL1O14753 267 aa1.55□□□□□ -2.16
HPS3-203ENST00000460822 ACYP1P07311 99 aa1.55□□□□□ -2.16
HPS3-203ENST00000460822 CRYGAP11844 174 aa1.55□□□□□ -2.16
HPS3-203ENST00000460822 COX7CP15954 63 aa1.55□□□□□ -2.16
HPS3-203ENST00000460822 RHOHQ15669 191 aa1.55□□□□□ -2.16
HPS3-203ENST00000460822 KLK9Q2XQG4 91 aa1.55□□□□□ -2.16
HPS3-203ENST00000460822 HRCT1Q6UXD1 115 aa1.55□□□□□ -2.16
HPS3-203ENST00000460822 VMO1Q7Z5L0 202 aa1.55□□□□□ -2.16
HPS3-203ENST00000460822 C5orf38Q86SI9 138 aa1.55□□□□□ -2.16
HPS3-203ENST00000460822 LINC00643Q86TS7 51 aa1.55□□□□□ -2.16
HPS3-203ENST00000460822 Q8N6K4 173 aa1.55□□□□□ -2.16
HPS3-203ENST00000460822 DYNLRB1Q9NP97 96 aa1.55□□□□□ -2.16
HPS3-203ENST00000460822 KLK9Q9UKQ9 250 aa1.55□□□□□ -2.16
HPS3-203ENST00000460822 ANKRD11Q6UB99 2663 aaPredicted RBP1.55□□□□□ -2.16
HPS3-203ENST00000460822 SPTBN1Q01082 2364 aaKnown RBP1.55□□□□□ -2.16
HPS3-203ENST00000460822 DOPEY2Q9Y3R5 2298 aa1.54□□□□□ -2.16
HPS3-203ENST00000460822 IGHV1-58A0A0C4DH39 117 aa1.54□□□□□ -2.16
HPS3-203ENST00000460822 E7EQL1 145 aa1.54□□□□□ -2.16
HPS3-203ENST00000460822 LYNX1G3V0Z9 82 aa1.54□□□□□ -2.16
HPS3-203ENST00000460822 ATOX1O00244 68 aa1.54□□□□□ -2.16
HPS3-203ENST00000460822 LYNX1P0DP58 116 aa1.54□□□□□ -2.16
HPS3-203ENST00000460822 DEFB1P60022 68 aa1.54□□□□□ -2.16
HPS3-203ENST00000460822 NPC2P61916 151 aa1.54□□□□□ -2.16
HPS3-203ENST00000460822 UBE2BP63146 152 aa1.54□□□□□ -2.16
HPS3-203ENST00000460822 PP632Q6XCG6 107 aa1.54□□□□□ -2.16
HPS3-203ENST00000460822 PRR15Q8IV56 129 aa1.54□□□□□ -2.16
HPS3-203ENST00000460822 TIMM21Q9BVV7 248 aa1.54□□□□□ -2.16
HPS3-203ENST00000460822 CYSTM1Q9H1C7 97 aa1.54□□□□□ -2.16
HPS3-203ENST00000460822 TRIOBPQ9H2D6 2365 aa1.54□□□□□ -2.16
HPS3-203ENST00000460822 ANKHD1Q8IWZ3 2542 aaKnown RBP1.54□□□□□ -2.16
HPS3-203ENST00000460822 CRYBG3Q68DQ2 2970 aa1.54□□□□□ -2.16
HPS3-203ENST00000460822 COL6A6A6NMZ7 2263 aa1.54□□□□□ -2.16
HPS3-203ENST00000460822 TRBV7-1A0A0A6YYK4 115 aa1.54□□□□□ -2.16
HPS3-203ENST00000460822 hADV29S1A0JD25 119 aa1.54□□□□□ -2.16
HPS3-203ENST00000460822 C3orf84H3BNL1 204 aa1.54□□□□□ -2.16
HPS3-203ENST00000460822 M0QY20 66 aa1.54□□□□□ -2.16
HPS3-203ENST00000460822 M0R1W7 72 aa1.54□□□□□ -2.16
HPS3-203ENST00000460822 TMEM258P61165 79 aa1.54□□□□□ -2.16
HPS3-203ENST00000460822 MRPS36P82909 103 aaKnown RBP1.54□□□□□ -2.16
HPS3-203ENST00000460822 ACACAQ13085 2346 aa1.54□□□□□ -2.16
HPS3-203ENST00000460822 FAM74A4Q5TZK3 123 aa1.54□□□□□ -2.16
HPS3-203ENST00000460822 NDUFA12Q9UI09 145 aa1.54□□□□□ -2.16
HPS3-203ENST00000460822 PSORS1C2Q9UIG4 136 aa1.54□□□□□ -2.16
HPS3-203ENST00000460822 C22orf24Q9Y442 160 aa1.54□□□□□ -2.16
HPS3-203ENST00000460822 COL12A1Q99715 3063 aa1.53□□□□□ -2.16
HPS3-203ENST00000460822 ABCA2Q9BZC7 2435 aa1.53□□□□□ -2.16
HPS3-203ENST00000460822 IGLV10-54A0A075B6I4 117 aa1.53□□□□□ -2.16
HPS3-203ENST00000460822 TRAV12-3A0A0B4J271 114 aa1.53□□□□□ -2.16
HPS3-203ENST00000460822 G3V318 75 aa1.53□□□□□ -2.16
HPS3-203ENST00000460822 TIMM17BO60830 172 aa1.53□□□□□ -2.16
HPS3-203ENST00000460822 TRACP01848 142 aa1.53□□□□□ -2.16
HPS3-203ENST00000460822 DEFB109BQ30KR1 87 aa1.53□□□□□ -2.16
HPS3-203ENST00000460822 Q5XG85 94 aa1.53□□□□□ -2.16
HPS3-203ENST00000460822 DPH3Q96FX2 82 aa1.53□□□□□ -2.16
HPS3-203ENST00000460822 SORL1Q92673 2214 aa1.53□□□□□ -2.16
HPS3-203ENST00000460822 NDUFA1O15239 70 aa1.52□□□□□ -2.17
HPS3-203ENST00000460822 MINOS1Q5TGZ0 78 aa1.52□□□□□ -2.17
HPS3-203ENST00000460822 Q8N2B8 174 aa1.52□□□□□ -2.17
HPS3-203ENST00000460822 SERP2Q8N6R1 65 aa1.52□□□□□ -2.17
HPS3-203ENST00000460822 LINC00308Q8TCZ7 52 aa1.52□□□□□ -2.17
HPS3-203ENST00000460822 DSCR8Q96T75 97 aa1.52□□□□□ -2.17
HPS3-203ENST00000460822 BDP1A6H8Y1 2624 aa1.52□□□□□ -2.17
HPS3-203ENST00000460822 AKAP9Q99996 3911 aa1.52□□□□□ -2.17
HPS3-203ENST00000460822 IGKV3-7A0A075B6H7 116 aa1.52□□□□□ -2.17
HPS3-203ENST00000460822 NBPF19A0A087WUL8 3843 aa1.52□□□□□ -2.17
HPS3-203ENST00000460822 A0A087WVE0 104 aa1.52□□□□□ -2.17
HPS3-203ENST00000460822 TRAV13-1A0A0B4J241 112 aa1.52□□□□□ -2.17
HPS3-203ENST00000460822 FAM223BA6NKX1 122 aa1.52□□□□□ -2.17
HPS3-203ENST00000460822 NDUFA4O00483 81 aa1.52□□□□□ -2.17
HPS3-203ENST00000460822 BAALC-AS2P0C853 105 aa1.52□□□□□ -2.17
HPS3-203ENST00000460822 Q6JHZ5 121 aa1.52□□□□□ -2.17
HPS3-203ENST00000460822 SOSTDC1Q6X4U4 206 aa1.52□□□□□ -2.17
HPS3-203ENST00000460822 FAM223AQ8IWN6 122 aa1.52□□□□□ -2.17
HPS3-203ENST00000460822 WFDC11Q8NEX6 87 aa1.52□□□□□ -2.17
HPS3-203ENST00000460822 Q9BRP9 147 aa1.52□□□□□ -2.17
HPS3-203ENST00000460822 UBE2D4Q9Y2X8 147 aa1.52□□□□□ -2.17
HPS3-203ENST00000460822 CSMD2Q7Z408 3487 aa1.51□□□□□ -2.17
HPS3-203ENST00000460822 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 215.2 ms