RNA–Protein interactions for RNA: ENST00000460639.2

ATRX-204, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 461 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-204ENST00000460639 Q8TAT8 98 aa2.49□□□□□ -2.01
ATRX-204ENST00000460639 COL5A1P20908 1838 aaPredicted RBP2.49□□□□□ -2.01
ATRX-204ENST00000460639 ZFHX2Q9C0A1 2572 aaPredicted RBP2.49□□□□□ -2.01
ATRX-204ENST00000460639 COL4A2P08572 1712 aa2.48□□□□□ -2.01
ATRX-204ENST00000460639 NCR3O14931 201 aa2.48□□□□□ -2.01
ATRX-204ENST00000460639 RPS27P42677 84 aaKnown RBP2.48□□□□□ -2.01
ATRX-204ENST00000460639 ERHP84090 104 aaKnown RBP2.48□□□□□ -2.01
ATRX-204ENST00000460639 C1orf137Q5JT78 98 aa2.48□□□□□ -2.01
ATRX-204ENST00000460639 DEFB123Q8N688 67 aa2.48□□□□□ -2.01
ATRX-204ENST00000460639 DMAC1Q96GE9 116 aa2.48□□□□□ -2.01
ATRX-204ENST00000460639 GAFA1Q96PS6 74 aa2.48□□□□□ -2.01
ATRX-204ENST00000460639 INTS1Q8N201 2190 aaKnown RBP2.48□□□□□ -2.01
ATRX-204ENST00000460639 MPDZO75970 2070 aa2.48□□□□□ -2.01
ATRX-204ENST00000460639 TEP1Q99973 2627 aaKnown RBP2.47□□□□□ -2.01
ATRX-204ENST00000460639 SPTBP11277 2137 aa2.47□□□□□ -2.01
ATRX-204ENST00000460639 CENPFP49454 3210 aa2.47□□□□□ -2.01
ATRX-204ENST00000460639 NDUFA4O00483 81 aa2.47□□□□□ -2.01
ATRX-204ENST00000460639 IGKV1-17P01599 117 aa2.47□□□□□ -2.01
ATRX-204ENST00000460639 IGLV3-1P01715 115 aa2.47□□□□□ -2.01
ATRX-204ENST00000460639 MGPP08493 103 aa2.47□□□□□ -2.01
ATRX-204ENST00000460639 HCP5Q6MZN7 132 aa2.47□□□□□ -2.01
ATRX-204ENST00000460639 KRTAP26-1Q6PEX3 210 aa2.47□□□□□ -2.01
ATRX-204ENST00000460639 SPACA4Q8TDM5 124 aa2.47□□□□□ -2.01
ATRX-204ENST00000460639 TTTY12Q9BZ98 90 aa2.47□□□□□ -2.01
ATRX-204ENST00000460639 ASH1LQ9NR48 2969 aaKnown RBP2.47□□□□□ -2.01
ATRX-204ENST00000460639 FREM3P0C091 2139 aa2.47□□□□□ -2.01
ATRX-204ENST00000460639 MUC6Q6W4X9 2439 aa2.47□□□□□ -2.01
ATRX-204ENST00000460639 BRCA2P51587 3418 aa2.46□□□□□ -2.01
ATRX-204ENST00000460639 ETDCA0A1B0GVM5 59 aa2.46□□□□□ -2.02
ATRX-204ENST00000460639 NDUFA1O15239 70 aa2.46□□□□□ -2.02
ATRX-204ENST00000460639 PRB2P02812 416 aaPredicted RBP2.46□□□□□ -2.02
ATRX-204ENST00000460639 KRTAP13-3Q3SY46 172 aa2.46□□□□□ -2.02
ATRX-204ENST00000460639 LINC00308Q8TCZ7 52 aa2.46□□□□□ -2.02
ATRX-204ENST00000460639 CCL26Q9Y258 94 aa2.46□□□□□ -2.02
ATRX-204ENST00000460639 RANBP2P49792 3224 aaKnown RBP2.46□□□□□ -2.02
ATRX-204ENST00000460639 ZDBF2Q9HCK1 2354 aa2.46□□□□□ -2.02
ATRX-204ENST00000460639 PTPN13Q12923 2485 aa2.46□□□□□ -2.02
ATRX-204ENST00000460639 ANKRD17O75179 2603 aaKnown RBP2.45□□□□□ -2.02
ATRX-204ENST00000460639 NUPR2A6NF83 97 aa2.45□□□□□ -2.02
ATRX-204ENST00000460639 UQCR11O14957 56 aa2.45□□□□□ -2.02
ATRX-204ENST00000460639 CCL18P55774 89 aa2.45□□□□□ -2.02
ATRX-204ENST00000460639 PIGYQ3MUY2 71 aa2.45□□□□□ -2.02
ATRX-204ENST00000460639 TRGV4A0A0C4DH28 118 aa2.44□□□□□ -2.02
ATRX-204ENST00000460639 SPINK7P58062 85 aa2.44□□□□□ -2.02
ATRX-204ENST00000460639 DEFB112Q30KQ8 113 aa2.44□□□□□ -2.02
ATRX-204ENST00000460639 LCE3AQ5TA76 89 aa2.44□□□□□ -2.02
ATRX-204ENST00000460639 COA5Q86WW8 74 aa2.44□□□□□ -2.02
ATRX-204ENST00000460639 PSORS1C2Q9UIG4 136 aa2.44□□□□□ -2.02
ATRX-204ENST00000460639 CR1P17927 2039 aa2.44□□□□□ -2.02
ATRX-204ENST00000460639 GCN1Q92616 2671 aaKnown RBP2.44□□□□□ -2.02
ATRX-204ENST00000460639 CFAP54Q96N23 3096 aa2.43□□□□□ -2.02
ATRX-204ENST00000460639 TRGV2A0A075B6R0 118 aa2.43□□□□□ -2.02
ATRX-204ENST00000460639 IGKV2-29A2NJV5 120 aaPredicted RBP2.43□□□□□ -2.02
ATRX-204ENST00000460639 IGKV4-1P06312 121 aa2.43□□□□□ -2.02
ATRX-204ENST00000460639 KCNQ1DNQ9H478 68 aa2.43□□□□□ -2.02
ATRX-204ENST00000460639 GOLGA4Q13439 2230 aaKnown RBP2.43□□□□□ -2.02
ATRX-204ENST00000460639 CCL3L1P16619 93 aa2.42□□□□□ -2.02
ATRX-204ENST00000460639 CRIP1P50238 77 aa2.42□□□□□ -2.02
ATRX-204ENST00000460639 PRCDQ00LT1 54 aa2.42□□□□□ -2.02
ATRX-204ENST00000460639 SPINK9Q5DT21 86 aa2.42□□□□□ -2.02
ATRX-204ENST00000460639 SPATA8Q6RVD6 105 aa2.42□□□□□ -2.02
ATRX-204ENST00000460639 C5orf42Q9H799 3197 aa2.42□□□□□ -2.02
ATRX-204ENST00000460639 CEP290O15078 2479 aa2.42□□□□□ -2.02
ATRX-204ENST00000460639 MDC1Q14676 2089 aaKnown RBP2.41□□□□□ -2.02
ATRX-204ENST00000460639 PRUNE2Q8WUY3 3088 aa2.41□□□□□ -2.02
ATRX-204ENST00000460639 LAMA3Q16787 3333 aa2.41□□□□□ -2.02
ATRX-204ENST00000460639 ABCA12Q86UK0 2595 aa2.41□□□□□ -2.02
ATRX-204ENST00000460639 TNRC6BQ9UPQ9 1833 aaKnown RBP2.41□□□□□ -2.02
ATRX-204ENST00000460639 A0A0G2JQZ4 141 aa2.41□□□□□ -2.02
ATRX-204ENST00000460639 A0A1W2PNN7 141 aa2.41□□□□□ -2.02
ATRX-204ENST00000460639 BRWD1Q9NSI6 2320 aa2.41□□□□□ -2.02
ATRX-204ENST00000460639 PI4KAP42356 2102 aa2.41□□□□□ -2.02
ATRX-204ENST00000460639 COL4A4P53420 1690 aaPredicted RBP2.41□□□□□ -2.02
ATRX-204ENST00000460639 DNHD1Q96M86 4753 aa2.4□□□□□ -2.02
ATRX-204ENST00000460639 FBN3Q75N90 2809 aa2.4□□□□□ -2.03
ATRX-204ENST00000460639 IGKV3-7A0A075B6H7 116 aa2.4□□□□□ -2.03
ATRX-204ENST00000460639 IGLV4-60A0A075B6I1 120 aa2.4□□□□□ -2.03
ATRX-204ENST00000460639 IGKV2D-24A0A075B6R9 120 aa2.4□□□□□ -2.03
ATRX-204ENST00000460639 RNASE3P12724 160 aaKnown RBP2.4□□□□□ -2.03
ATRX-204ENST00000460639 LINC00315P59091 139 aa2.4□□□□□ -2.03
ATRX-204ENST00000460639 DEFB134Q4QY38 66 aa2.4□□□□□ -2.03
ATRX-204ENST00000460639 SMIM11BQ8TCY0 68 aa2.4□□□□□ -2.03
ATRX-204ENST00000460639 SPRR4Q96PI1 79 aa2.4□□□□□ -2.03
ATRX-204ENST00000460639 ARFGEF3Q5TH69 2177 aa2.4□□□□□ -2.03
ATRX-204ENST00000460639 MYO18BQ8IUG5 2567 aa2.4□□□□□ -2.03
ATRX-204ENST00000460639 REV3LO60673 3130 aa2.39□□□□□ -2.03
ATRX-204ENST00000460639 BPTFQ12830 3046 aa2.39□□□□□ -2.03
ATRX-204ENST00000460639 ITPR3Q14573 2671 aa2.39□□□□□ -2.03
ATRX-204ENST00000460639 SPTBN4Q9H254 2564 aa2.39□□□□□ -2.03
ATRX-204ENST00000460639 DOPEY1Q5JWR5 2465 aa2.39□□□□□ -2.03
ATRX-204ENST00000460639 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.39□□□□□ -2.03
ATRX-204ENST00000460639 COX17Q14061 63 aa2.39□□□□□ -2.03
ATRX-204ENST00000460639 Q6ZTI0 123 aa2.39□□□□□ -2.03
ATRX-204ENST00000460639 ESPL1Q14674 2120 aa2.38□□□□□ -2.03
ATRX-204ENST00000460639 MRPL33O75394 65 aaKnown RBP2.38□□□□□ -2.03
ATRX-204ENST00000460639 KRTAP10-8P60410 259 aa2.38□□□□□ -2.03
ATRX-204ENST00000460639 LY6EQ16553 131 aa2.38□□□□□ -2.03
ATRX-204ENST00000460639 USP34Q70CQ2 3546 aa2.38□□□□□ -2.03
ATRX-204ENST00000460639 DOCK10Q96BY6 2186 aa2.38□□□□□ -2.03
ATRX-204ENST00000460639 TPRP12270 2363 aaKnown RBP2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms