RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 HRNRQ86YZ3 2850 aaPredicted RBP0.28□□□□□ -2.36
HMGN3P1-201ENST00000453847 PKDREJQ9NTG1 2253 aa0.28□□□□□ -2.36
HMGN3P1-201ENST00000453847 RGPD2P0DJD1 1756 aa0.28□□□□□ -2.36
HMGN3P1-201ENST00000453847 IQCF6A8MYZ5 107 aa0.28□□□□□ -2.36
HMGN3P1-201ENST00000453847 ALKAL2Q6UX46 152 aa0.28□□□□□ -2.36
HMGN3P1-201ENST00000453847 MAST4O15021 2626 aa0.28□□□□□ -2.37
HMGN3P1-201ENST00000453847 QSER1Q2KHR3 1735 aa0.27□□□□□ -2.37
HMGN3P1-201ENST00000453847 NCOR2Q9Y618 2525 aa0.27□□□□□ -2.37
HMGN3P1-201ENST00000453847 TNXBP22105 4242 aa0.27□□□□□ -2.37
HMGN3P1-201ENST00000453847 CHD6Q8TD26 2715 aa0.27□□□□□ -2.37
HMGN3P1-201ENST00000453847 ATP7BP35670 1465 aa0.27□□□□□ -2.37
HMGN3P1-201ENST00000453847 DIP2BQ9P265 1576 aa0.27□□□□□ -2.37
HMGN3P1-201ENST00000453847 MDN1Q9NU22 5596 aa0.27□□□□□ -2.37
HMGN3P1-201ENST00000453847 ZNF831Q5JPB2 1677 aa0.26□□□□□ -2.37
HMGN3P1-201ENST00000453847 NCOR1O75376 2440 aa0.26□□□□□ -2.37
HMGN3P1-201ENST00000453847 HUWE1Q7Z6Z7 4374 aaKnown RBP0.25□□□□□ -2.37
HMGN3P1-201ENST00000453847 SMIM11AP58511 58 aa0.25□□□□□ -2.37
HMGN3P1-201ENST00000453847 FAT2Q9NYQ8 4349 aa0.25□□□□□ -2.37
HMGN3P1-201ENST00000453847 WNK2Q9Y3S1 2297 aa0.25□□□□□ -2.37
HMGN3P1-201ENST00000453847 COL14A1Q05707 1796 aaKnown RBP0.24□□□□□ -2.37
HMGN3P1-201ENST00000453847 LRRC7Q96NW7 1537 aa0.24□□□□□ -2.37
HMGN3P1-201ENST00000453847 DEFB112Q30KQ8 113 aa0.24□□□□□ -2.37
HMGN3P1-201ENST00000453847 USMG5Q96IX5 58 aa0.24□□□□□ -2.37
HMGN3P1-201ENST00000453847 TENM4Q6N022 2769 aa0.24□□□□□ -2.37
HMGN3P1-201ENST00000453847 HIVEP3Q5T1R4 2406 aa0.24□□□□□ -2.37
HMGN3P1-201ENST00000453847 SUPT6HQ7KZ85 1726 aaKnown RBP0.24□□□□□ -2.37
HMGN3P1-201ENST00000453847 UACAQ9BZF9 1416 aa0.23□□□□□ -2.37
HMGN3P1-201ENST00000453847 KLK9Q2XQG4 91 aa0.23□□□□□ -2.37
HMGN3P1-201ENST00000453847 CCDC141Q6ZP82 1450 aa0.22□□□□□ -2.37
HMGN3P1-201ENST00000453847 MAGI2Q86UL8 1455 aa0.22□□□□□ -2.37
HMGN3P1-201ENST00000453847 KMT2AQ03164 3969 aa0.22□□□□□ -2.37
HMGN3P1-201ENST00000453847 UBR5O95071 2799 aaPredicted RBP0.22□□□□□ -2.37
HMGN3P1-201ENST00000453847 MYMXA0A1B0GTQ4 84 aa0.22□□□□□ -2.37
HMGN3P1-201ENST00000453847 SNRPFP62306 86 aaKnown RBP0.22□□□□□ -2.37
HMGN3P1-201ENST00000453847 POLR1AO95602 1720 aaPredicted RBP0.21□□□□□ -2.38
HMGN3P1-201ENST00000453847 USP32Q8NFA0 1604 aa0.21□□□□□ -2.38
HMGN3P1-201ENST00000453847 PRM1P04553 51 aa0.21□□□□□ -2.38
HMGN3P1-201ENST00000453847 DEFB105AQ8NG35 78 aa0.21□□□□□ -2.38
HMGN3P1-201ENST00000453847 BSNQ9UPA5 3926 aa0.2□□□□□ -2.38
HMGN3P1-201ENST00000453847 MUC5ACP98088 5654 aa0.2□□□□□ -2.38
HMGN3P1-201ENST00000453847 CPSF4LA6NMK7 179 aaKnown RBP0.2□□□□□ -2.38
HMGN3P1-201ENST00000453847 COX8AP10176 69 aa0.2□□□□□ -2.38
HMGN3P1-201ENST00000453847 PLGLAQ15195 96 aa0.2□□□□□ -2.38
HMGN3P1-201ENST00000453847 LINC00643Q86TS7 51 aa0.2□□□□□ -2.38
HMGN3P1-201ENST00000453847 IGSF10Q6WRI0 2623 aa0.19□□□□□ -2.38
HMGN3P1-201ENST00000453847 MYCBP2O75592 4640 aa0.19□□□□□ -2.38
HMGN3P1-201ENST00000453847 FXYD6Q9H0Q3 95 aa0.19□□□□□ -2.38
HMGN3P1-201ENST00000453847 HMCN2Q8NDA2 5059 aa0.19□□□□□ -2.38
HMGN3P1-201ENST00000453847 CCDC18Q5T9S5 1454 aa0.18□□□□□ -2.38
HMGN3P1-201ENST00000453847 A0A1B0GUT8 65 aa0.18□□□□□ -2.38
HMGN3P1-201ENST00000453847 MRPL34Q9BQ48 92 aaKnown RBP0.18□□□□□ -2.38
HMGN3P1-201ENST00000453847 RABAC1Q9UI14 185 aa0.18□□□□□ -2.38
HMGN3P1-201ENST00000453847 APLNQ9ULZ1 77 aa0.18□□□□□ -2.38
HMGN3P1-201ENST00000453847 BCORQ6W2J9 1755 aa0.18□□□□□ -2.38
HMGN3P1-201ENST00000453847 PRKDCP78527 4128 aaKnown RBP0.18□□□□□ -2.38
HMGN3P1-201ENST00000453847 ARHGAP35Q9NRY4 1499 aa0.17□□□□□ -2.38
HMGN3P1-201ENST00000453847 I3L3M4 83 aa0.17□□□□□ -2.38
HMGN3P1-201ENST00000453847 LELP1Q5T871 98 aa0.17□□□□□ -2.38
HMGN3P1-201ENST00000453847 CACNA1AO00555 2505 aa0.17□□□□□ -2.38
HMGN3P1-201ENST00000453847 LTN1O94822 1766 aa0.17□□□□□ -2.38
HMGN3P1-201ENST00000453847 SCRIBQ14160 1630 aa0.16□□□□□ -2.38
HMGN3P1-201ENST00000453847 LRRC9Q6ZRR7 1453 aa0.16□□□□□ -2.38
HMGN3P1-201ENST00000453847 SPTY2D1-AS1A0A0U1RR47 76 aa0.16□□□□□ -2.38
HMGN3P1-201ENST00000453847 PREX1Q8TCU6 1659 aa0.16□□□□□ -2.38
HMGN3P1-201ENST00000453847 ERVK-7P63135 1459 aa0.16□□□□□ -2.38
HMGN3P1-201ENST00000453847 DOT1LQ8TEK3 1739 aa0.16□□□□□ -2.38
HMGN3P1-201ENST00000453847 CEP170BQ9Y4F5 1589 aaPredicted RBP0.15□□□□□ -2.38
HMGN3P1-201ENST00000453847 PKD1L1Q8TDX9 2849 aa0.15□□□□□ -2.38
HMGN3P1-201ENST00000453847 ABCA2Q9BZC7 2435 aa0.15□□□□□ -2.39
HMGN3P1-201ENST00000453847 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.15□□□□□ -2.39
HMGN3P1-201ENST00000453847 DCAF1Q9Y4B6 1507 aa0.15□□□□□ -2.39
HMGN3P1-201ENST00000453847 COX7BP24311 80 aa0.15□□□□□ -2.39
HMGN3P1-201ENST00000453847 H1FX-AS1Q4G0G2 97 aa0.15□□□□□ -2.39
HMGN3P1-201ENST00000453847 UBR3Q6ZT12 1888 aa0.15□□□□□ -2.39
HMGN3P1-201ENST00000453847 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.15□□□□□ -2.39
HMGN3P1-201ENST00000453847 CSPG4Q6UVK1 2322 aa0.15□□□□□ -2.39
HMGN3P1-201ENST00000453847 LPAP08519 4548 aa0.15□□□□□ -2.39
HMGN3P1-201ENST00000453847 KMT2DO14686 5537 aa0.15□□□□□ -2.39
HMGN3P1-201ENST00000453847 ATRQ13535 2644 aa0.14□□□□□ -2.39
HMGN3P1-201ENST00000453847 CEBPZOSA8MTT3 80 aa0.14□□□□□ -2.39
HMGN3P1-201ENST00000453847 PIK3C2BO00750 1634 aa0.13□□□□□ -2.39
HMGN3P1-201ENST00000453847 TRAV21A0A0B4J279 112 aa0.13□□□□□ -2.39
HMGN3P1-201ENST00000453847 TIAM2Q8IVF5 1701 aa0.13□□□□□ -2.39
HMGN3P1-201ENST00000453847 ALMS1Q8TCU4 4167 aa0.13□□□□□ -2.39
HMGN3P1-201ENST00000453847 ACYP1P07311 99 aa0.12□□□□□ -2.39
HMGN3P1-201ENST00000453847 NCOA2Q15596 1464 aa0.11□□□□□ -2.39
HMGN3P1-201ENST00000453847 GAFA1Q96PS6 74 aa0.11□□□□□ -2.39
HMGN3P1-201ENST00000453847 PTPN13Q12923 2485 aa0.1□□□□□ -2.39
HMGN3P1-201ENST00000453847 MAGI3Q5TCQ9 1506 aa0.1□□□□□ -2.39
HMGN3P1-201ENST00000453847 SPINK4O60575 86 aa0.1□□□□□ -2.39
HMGN3P1-201ENST00000453847 ST20Q9HBF5 79 aa0.1□□□□□ -2.39
HMGN3P1-201ENST00000453847 SPRR2DP22532 72 aa0.09□□□□□ -2.4
HMGN3P1-201ENST00000453847 REV3LO60673 3130 aa0.09□□□□□ -2.4
HMGN3P1-201ENST00000453847 SPTA1P02549 2419 aa0.09□□□□□ -2.4
HMGN3P1-201ENST00000453847 COL7A1Q02388 2944 aa0.09□□□□□ -2.4
HMGN3P1-201ENST00000453847 DMBT1Q9UGM3 2413 aaPredicted RBP0.08□□□□□ -2.4
HMGN3P1-201ENST00000453847 URB2Q14146 1524 aaKnown RBP0.08□□□□□ -2.4
HMGN3P1-201ENST00000453847 KDM5DQ9BY66 1539 aa0.08□□□□□ -2.4
HMGN3P1-201ENST00000453847 CLIP1P30622 1438 aa0.08□□□□□ -2.4
HMGN3P1-201ENST00000453847 KANTRA0A1W2PQU2 76 aa0.08□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms