RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 MSMBP08118 114 aa12.52□□□□□ -0.4
PTPA-223ENST00000452489 SYCNQ0VAF6 134 aa12.52□□□□□ -0.4
PTPA-223ENST00000452489 UNQ6190/PRO20217Q6UXQ8 127 aa12.52□□□□□ -0.41
PTPA-223ENST00000452489 RIF1Q5UIP0 2472 aaKnown RBP12.51□□□□□ -0.41
PTPA-223ENST00000452489 CEP295Q9C0D2 2601 aa12.51□□□□□ -0.41
PTPA-223ENST00000452489 SPG11Q96JI7 2443 aa12.5□□□□□ -0.41
PTPA-223ENST00000452489 MRPL55Q7Z7F7 128 aaKnown RBP12.5□□□□□ -0.41
PTPA-223ENST00000452489 A0A096LPF7 62 aa12.5□□□□□ -0.41
PTPA-223ENST00000452489 ZNF702PQ9H963 129 aa12.5□□□□□ -0.41
PTPA-223ENST00000452489 MUC6Q6W4X9 2439 aa12.49□□□□□ -0.41
PTPA-223ENST00000452489 IGHV4-30-2A0A087WSY4 118 aa12.49□□□□□ -0.41
PTPA-223ENST00000452489 CHCHD10Q8WYQ3 142 aaPredicted RBP12.49□□□□□ -0.41
PTPA-223ENST00000452489 LCE6AA0A183 80 aa12.48□□□□□ -0.41
PTPA-223ENST00000452489 PSCAO43653 123 aa12.48□□□□□ -0.41
PTPA-223ENST00000452489 GIG44P09565 113 aaPredicted RBP12.48□□□□□ -0.41
PTPA-223ENST00000452489 C16orf74Q96GX8 76 aa12.48□□□□□ -0.41
PTPA-223ENST00000452489 ZNF73O43830 326 aaPredicted RBP12.48□□□□□ -0.41
PTPA-223ENST00000452489 RBM12B-AS1Q9P1G2 102 aa12.47□□□□□ -0.41
PTPA-223ENST00000452489 A0A1B0GUV1 79 aa12.47□□□□□ -0.41
PTPA-223ENST00000452489 ZCCHC13Q8WW36 166 aaKnown RBP12.47□□□□□ -0.41
PTPA-223ENST00000452489 JMJD1CQ15652 2540 aa12.46□□□□□ -0.41
PTPA-223ENST00000452489 IGHV4-30-4P0DP06 118 aa12.45□□□□□ -0.42
PTPA-223ENST00000452489 HIGD2BQ4VC39 106 aa12.45□□□□□ -0.42
PTPA-223ENST00000452489 Q5VV11 94 aa12.45□□□□□ -0.42
PTPA-223ENST00000452489 XAGE1AQ9HD64 81 aa12.45□□□□□ -0.42
PTPA-223ENST00000452489 ELOF1P60002 83 aaKnown RBP12.45□□□□□ -0.42
PTPA-223ENST00000452489 CCL24O00175 119 aa12.44□□□□□ -0.42
PTPA-223ENST00000452489 GYPEP15421 78 aa12.44□□□□□ -0.42
PTPA-223ENST00000452489 WFDC10AQ9H1F0 79 aa12.44□□□□□ -0.42
PTPA-223ENST00000452489 LINC00588Q9Y4M8 146 aa12.43□□□□□ -0.42
PTPA-223ENST00000452489 KTN1-AS1Q86SY8 53 aa12.43□□□□□ -0.42
PTPA-223ENST00000452489 NIPBLQ6KC79 2804 aaeCLIP12.43□□□□□ -0.42
PTPA-223ENST00000452489 HIVEP3Q5T1R4 2406 aa12.42□□□□□ -0.42
PTPA-223ENST00000452489 DEFB130BP0DP73 79 aa12.42□□□□□ -0.42
PTPA-223ENST00000452489 DEFB130AP0DP74 79 aa12.42□□□□□ -0.42
PTPA-223ENST00000452489 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.42□□□□□ -0.42
PTPA-223ENST00000452489 B4DSR2 109 aa12.42□□□□□ -0.42
PTPA-223ENST00000452489 CYSRT1A8MQ03 144 aa12.41□□□□□ -0.42
PTPA-223ENST00000452489 SPAG11BQ08648 103 aa12.41□□□□□ -0.42
PTPA-223ENST00000452489 TLN2Q9Y4G6 2542 aa12.4□□□□□ -0.42
PTPA-223ENST00000452489 MXRA5Q9NR99 2828 aa12.4□□□□□ -0.42
PTPA-223ENST00000452489 UBE2BP63146 152 aa12.4□□□□□ -0.42
PTPA-223ENST00000452489 ST20-AS1Q8NBB2 130 aa12.4□□□□□ -0.42
PTPA-223ENST00000452489 CYP4F30PQ9H0H9 118 aa12.4□□□□□ -0.42
PTPA-223ENST00000452489 ZANQ9Y493 2812 aa12.4□□□□□ -0.43
PTPA-223ENST00000452489 ANGP03950 147 aaKnown RBP12.39□□□□□ -0.43
PTPA-223ENST00000452489 SETXQ7Z333 2677 aaKnown RBP12.39□□□□□ -0.43
PTPA-223ENST00000452489 C16orf90A8MZG2 172 aa12.39□□□□□ -0.43
PTPA-223ENST00000452489 REG3AQ06141 175 aa12.38□□□□□ -0.43
PTPA-223ENST00000452489 SPTSSBQ8NFR3 76 aa12.38□□□□□ -0.43
PTPA-223ENST00000452489 C4orf3Q8WVX3 66 aa12.38□□□□□ -0.43
PTPA-223ENST00000452489 CHKB-CPT1BH3BT56 60 aa12.37□□□□□ -0.43
PTPA-223ENST00000452489 CSNK1G2-AS1Q8NCQ2 148 aa12.37□□□□□ -0.43
PTPA-223ENST00000452489 A0A0J9YWU9 116 aa12.35□□□□□ -0.43
PTPA-223ENST00000452489 ETDCA0A1B0GVM5 59 aa12.35□□□□□ -0.43
PTPA-223ENST00000452489 APCP25054 2843 aa12.35□□□□□ -0.43
PTPA-223ENST00000452489 MYO9AB2RTY4 2548 aa12.34□□□□□ -0.43
PTPA-223ENST00000452489 M0R378 163 aa12.34□□□□□ -0.43
PTPA-223ENST00000452489 LINC00528Q8N1L1 170 aa12.33□□□□□ -0.44
PTPA-223ENST00000452489 CCL19Q99731 98 aa12.33□□□□□ -0.44
PTPA-223ENST00000452489 FBN2P35556 2912 aa12.33□□□□□ -0.44
PTPA-223ENST00000452489 UBE2AP49459 152 aa12.32□□□□□ -0.44
PTPA-223ENST00000452489 DEFB105AQ8NG35 78 aa12.32□□□□□ -0.44
PTPA-223ENST00000452489 C6orf48Q9UBA6 75 aa12.31□□□□□ -0.44
PTPA-223ENST00000452489 LYRM9A8MSI8 78 aa12.3□□□□□ -0.44
PTPA-223ENST00000452489 FN1P02751 2386 aaKnown RBP12.3□□□□□ -0.44
PTPA-223ENST00000452489 MAPK1IP1LQ8NDC0 245 aa12.3□□□□□ -0.44
PTPA-223ENST00000452489 HCG22E2RYF7 251 aa12.29□□□□□ -0.44
PTPA-223ENST00000452489 NBEAL2Q6ZNJ1 2754 aa12.29□□□□□ -0.44
PTPA-223ENST00000452489 ESM1Q9NQ30 184 aa12.29□□□□□ -0.44
PTPA-223ENST00000452489 K7EQZ3 153 aa12.28□□□□□ -0.44
PTPA-223ENST00000452489 PRR15LQ9BU68 103 aa12.28□□□□□ -0.44
PTPA-223ENST00000452489 KPRPQ5T749 579 aaPredicted RBP12.28□□□□□ -0.44
PTPA-223ENST00000452489 LCA10Q71F78 164 aa12.28□□□□□ -0.44
PTPA-223ENST00000452489 Q8N9P0 234 aaPredicted RBP12.27□□□□□ -0.45
PTPA-223ENST00000452489 DSCR10P59022 87 aa12.27□□□□□ -0.45
PTPA-223ENST00000452489 Q6YL49 198 aa12.27□□□□□ -0.45
PTPA-223ENST00000452489 VPREB1P12018 145 aa12.26□□□□□ -0.45
PTPA-223ENST00000452489 A0A1W2PNM2 257 aa12.25□□□□□ -0.45
PTPA-223ENST00000452489 B9D2Q9BPU9 175 aa12.25□□□□□ -0.45
PTPA-223ENST00000452489 Q8N377 158 aa12.24□□□□□ -0.45
PTPA-223ENST00000452489 IGF2RP11717 2491 aa12.23□□□□□ -0.45
PTPA-223ENST00000452489 C11orf45Q8TAV5 145 aa12.22□□□□□ -0.45
PTPA-223ENST00000452489 PTPN13Q12923 2485 aa12.22□□□□□ -0.45
PTPA-223ENST00000452489 USP9YO00507 2555 aaPredicted RBP12.22□□□□□ -0.45
PTPA-223ENST00000452489 A6NN06 94 aa12.22□□□□□ -0.45
PTPA-223ENST00000452489 PRO0255Q9UI72 69 aa12.22□□□□□ -0.45
PTPA-223ENST00000452489 IGLV5-48A0A075B6I7 105 aa12.21□□□□□ -0.45
PTPA-223ENST00000452489 GVQW2A0A096LPI5 108 aaPredicted RBP12.2□□□□□ -0.46
PTPA-223ENST00000452489 DEFB116Q30KQ4 102 aa12.2□□□□□ -0.46
PTPA-223ENST00000452489 ATP11AUNQ6ZP68 121 aa12.2□□□□□ -0.46
PTPA-223ENST00000452489 NDUFB1O75438 58 aa12.2□□□□□ -0.46
PTPA-223ENST00000452489 LIMD2Q9BT23 127 aa12.19□□□□□ -0.46
PTPA-223ENST00000452489 UTP20O75691 2785 aaKnown RBP12.19□□□□□ -0.46
PTPA-223ENST00000452489 ZFYVE26Q68DK2 2539 aa12.19□□□□□ -0.46
PTPA-223ENST00000452489 C19orf73Q9NVV2 129 aa12.18□□□□□ -0.46
PTPA-223ENST00000452489 NDUFS5O43920 106 aa12.18□□□□□ -0.46
PTPA-223ENST00000452489 LINC00208Q96KT6 92 aa12.18□□□□□ -0.46
PTPA-223ENST00000452489 A6NED7 52 aa12.17□□□□□ -0.46
PTPA-223ENST00000452489 APOC4P55056 127 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms