RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 YPEL4Q96NS1 127 aa4.12□□□□□ -1.75
LRRC28-203ENST00000447360 RETNLBQ9BQ08 111 aa4.12□□□□□ -1.75
LRRC28-203ENST00000447360 CST9LQ9H4G1 147 aa4.12□□□□□ -1.75
LRRC28-203ENST00000447360 SMCO4Q9NRQ5 59 aa4.12□□□□□ -1.75
LRRC28-203ENST00000447360 TRAPPC1Q9Y5R8 145 aa4.12□□□□□ -1.75
LRRC28-203ENST00000447360 IGLV5-45A0A087WSX0 123 aa4.11□□□□□ -1.75
LRRC28-203ENST00000447360 TINCRA0A1B0GVN0 87 aa4.11□□□□□ -1.75
LRRC28-203ENST00000447360 NDUFC2-KCTD14E9PQ53 114 aa4.11□□□□□ -1.75
LRRC28-203ENST00000447360 LINC00614P0C842 121 aa4.11□□□□□ -1.75
LRRC28-203ENST00000447360 SEC11AP67812 179 aa4.11□□□□□ -1.75
LRRC28-203ENST00000447360 C6orf226Q5I0X4 101 aa4.11□□□□□ -1.75
LRRC28-203ENST00000447360 C9orf129Q5T035 196 aaKnown RBP4.11□□□□□ -1.75
LRRC28-203ENST00000447360 Q8IZM0 81 aa4.11□□□□□ -1.75
LRRC28-203ENST00000447360 C18orf32Q8TCD1 76 aa4.11□□□□□ -1.75
LRRC28-203ENST00000447360 TOMM7Q9P0U1 55 aa4.11□□□□□ -1.75
LRRC28-203ENST00000447360 IGLV5-39A0A0G2JS06 123 aa4.1□□□□□ -1.75
LRRC28-203ENST00000447360 LINC01549A6NIU2 74 aa4.1□□□□□ -1.75
LRRC28-203ENST00000447360 SMIM1B2RUZ4 78 aa4.1□□□□□ -1.75
LRRC28-203ENST00000447360 NUPR1O60356 82 aa4.1□□□□□ -1.75
LRRC28-203ENST00000447360 PMVKQ15126 192 aa4.1□□□□□ -1.75
LRRC28-203ENST00000447360 FA2HQ7L5A8 372 aa4.1□□□□□ -1.75
LRRC28-203ENST00000447360 PACRGQ96M98 296 aaPredicted RBP4.1□□□□□ -1.75
LRRC28-203ENST00000447360 KRTAP4-7Q9BYR0 210 aa4.1□□□□□ -1.75
LRRC28-203ENST00000447360 GEMIN7Q9H840 131 aaKnown RBP4.1□□□□□ -1.75
LRRC28-203ENST00000447360 F8VRH5 84 aa4.09□□□□□ -1.75
LRRC28-203ENST00000447360 PRSS2P07478 247 aa4.09□□□□□ -1.75
LRRC28-203ENST00000447360 CKS1BP61024 79 aa4.09□□□□□ -1.75
LRRC28-203ENST00000447360 PMCHL1Q16048 86 aa4.09□□□□□ -1.75
LRRC28-203ENST00000447360 ASB16-AS1Q495Z4 193 aa4.09□□□□□ -1.75
LRRC28-203ENST00000447360 PDZD11Q5EBL8 140 aa4.09□□□□□ -1.75
LRRC28-203ENST00000447360 LINC00469Q8N7U9 141 aa4.09□□□□□ -1.75
LRRC28-203ENST00000447360 PPDPFQ9H3Y8 114 aa4.09□□□□□ -1.75
LRRC28-203ENST00000447360 SPINK8P0C7L1 97 aa4.08□□□□□ -1.76
LRRC28-203ENST00000447360 IGLC3P0DOY3 106 aa4.08□□□□□ -1.76
LRRC28-203ENST00000447360 RPL28P46779 137 aaKnown RBP4.08□□□□□ -1.76
LRRC28-203ENST00000447360 LINC00304Q8N9R0 145 aa4.08□□□□□ -1.76
LRRC28-203ENST00000447360 COX7B2Q8TF08 81 aa4.08□□□□□ -1.76
LRRC28-203ENST00000447360 XAGE1AQ9HD64 81 aa4.08□□□□□ -1.76
LRRC28-203ENST00000447360 H0Y8G0 127 aa4.07□□□□□ -1.76
LRRC28-203ENST00000447360 HBDP02042 147 aa4.07□□□□□ -1.76
LRRC28-203ENST00000447360 HERV-K104P63124 156 aa4.07□□□□□ -1.76
LRRC28-203ENST00000447360 KRTAP13-2Q52LG2 175 aa4.07□□□□□ -1.76
LRRC28-203ENST00000447360 C22orf24Q9Y442 160 aa4.07□□□□□ -1.76
LRRC28-203ENST00000447360 ZNF22P17026 224 aaPredicted RBP4.06□□□□□ -1.76
LRRC28-203ENST00000447360 CXCL5P42830 114 aa4.06□□□□□ -1.76
LRRC28-203ENST00000447360 NDUFA6P56556 154 aa4.06□□□□□ -1.76
LRRC28-203ENST00000447360 RAB5BP61020 215 aa4.06□□□□□ -1.76
LRRC28-203ENST00000447360 FAM229BQ4G0N7 80 aa4.06□□□□□ -1.76
LRRC28-203ENST00000447360 BAGE3Q86Y29 109 aa4.06□□□□□ -1.76
LRRC28-203ENST00000447360 CBLN2Q8IUK8 224 aa4.06□□□□□ -1.76
LRRC28-203ENST00000447360 LINC00337Q8N6G1 96 aa4.06□□□□□ -1.76
LRRC28-203ENST00000447360 KRTAP4-1Q9BYQ7 146 aa4.06□□□□□ -1.76
LRRC28-203ENST00000447360 IGLV5-37A0A075B6J1 123 aa4.05□□□□□ -1.76
LRRC28-203ENST00000447360 C11orf86A6NJI1 115 aa4.05□□□□□ -1.76
LRRC28-203ENST00000447360 COLCA2A8K830 154 aa4.05□□□□□ -1.76
LRRC28-203ENST00000447360 BCE1O60756 84 aa4.05□□□□□ -1.76
LRRC28-203ENST00000447360 CFC1BP0CG36 223 aa4.05□□□□□ -1.76
LRRC28-203ENST00000447360 FP248Q71RG6 208 aaPredicted RBP4.05□□□□□ -1.76
LRRC28-203ENST00000447360 ANAPC11Q9NYG5 84 aa4.05□□□□□ -1.76
LRRC28-203ENST00000447360 H3BRM9 83 aa4.04□□□□□ -1.76
LRRC28-203ENST00000447360 ATP5LO75964 103 aa4.04□□□□□ -1.76
LRRC28-203ENST00000447360 CHCHD1Q96BP2 118 aaKnown RBP4.04□□□□□ -1.76
LRRC28-203ENST00000447360 LINC00167Q96N53 147 aa4.04□□□□□ -1.76
LRRC28-203ENST00000447360 IGKV2D-26A0A0A0MRZ7 120 aa4.03□□□□□ -1.76
LRRC28-203ENST00000447360 TRAV12-1A0A0B4J245 112 aa4.03□□□□□ -1.76
LRRC28-203ENST00000447360 TRGC2P03986 189 aa4.03□□□□□ -1.76
LRRC28-203ENST00000447360 RPL24P83731 157 aaKnown RBP4.03□□□□□ -1.76
LRRC28-203ENST00000447360 KRTAP13-3Q3SY46 172 aa4.03□□□□□ -1.76
LRRC28-203ENST00000447360 MRPL55Q7Z7F7 128 aaKnown RBP4.03□□□□□ -1.76
LRRC28-203ENST00000447360 FAM19A2Q8N3H0 131 aa4.03□□□□□ -1.76
LRRC28-203ENST00000447360 TP73-AS1Q9UF72 201 aa4.03□□□□□ -1.76
LRRC28-203ENST00000447360 CHTOPQ9Y3Y2 248 aaKnown RBP4.03□□□□□ -1.76
LRRC28-203ENST00000447360 TMEM223A0PJW6 202 aa4.02□□□□□ -1.77
LRRC28-203ENST00000447360 PFN2P35080 140 aa4.02□□□□□ -1.77
LRRC28-203ENST00000447360 TMEM170BQ5T4T1 132 aa4.02□□□□□ -1.77
LRRC28-203ENST00000447360 IFI27L1Q96BM0 104 aa4.02□□□□□ -1.77
LRRC28-203ENST00000447360 ZNF625Q96I27 306 aaPredicted RBP4.02□□□□□ -1.77
LRRC28-203ENST00000447360 RPL37AP8A6NKH3 93 aa4.01□□□□□ -1.77
LRRC28-203ENST00000447360 SCO1O75880 301 aa4.01□□□□□ -1.77
LRRC28-203ENST00000447360 MT1HP80294 61 aa4.01□□□□□ -1.77
LRRC28-203ENST00000447360 COA6Q5JTJ3 125 aaKnown RBP4.01□□□□□ -1.77
LRRC28-203ENST00000447360 SPAG11AQ6PDA7 123 aa4.01□□□□□ -1.77
LRRC28-203ENST00000447360 Q8NDZ9 215 aa4.01□□□□□ -1.77
LRRC28-203ENST00000447360 SND1-IT1Q9HBX3 110 aa4.01□□□□□ -1.77
LRRC28-203ENST00000447360 ERG28Q9UKR5 140 aa4.01□□□□□ -1.77
LRRC28-203ENST00000447360 HSBP1O75506 76 aa4□□□□□ -1.77
LRRC28-203ENST00000447360 SERF1AO75920 110 aa4□□□□□ -1.77
LRRC28-203ENST00000447360 COX17Q14061 63 aa4□□□□□ -1.77
LRRC28-203ENST00000447360 KRTAP13-1Q8IUC0 172 aa4□□□□□ -1.77
LRRC28-203ENST00000447360 KRTAP4-9Q9BYQ8 210 aa4□□□□□ -1.77
LRRC28-203ENST00000447360 KRTAP19-2Q3LHN2 52 aa3.99□□□□□ -1.77
LRRC28-203ENST00000447360 IGKV2-28A0A075B6P5 120 aa3.98□□□□□ -1.77
LRRC28-203ENST00000447360 PCP4L1A6NKN8 68 aa3.98□□□□□ -1.77
LRRC28-203ENST00000447360 HIST1H2BKO60814 126 aa3.98□□□□□ -1.77
LRRC28-203ENST00000447360 LEPROTL1O95214 131 aa3.98□□□□□ -1.77
LRRC28-203ENST00000447360 IGKV2D-28P01615 120 aa3.98□□□□□ -1.77
LRRC28-203ENST00000447360 HIST1H2BJP06899 126 aa3.98□□□□□ -1.77
LRRC28-203ENST00000447360 HIST1H2BOP23527 126 aa3.98□□□□□ -1.77
LRRC28-203ENST00000447360 HIST1H2BBP33778 126 aa3.98□□□□□ -1.77
LRRC28-203ENST00000447360 UBE2AP49459 152 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms