RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 TRBV6-8A0A0A6YYG3 113 aa2.78□□□□□ -1.96
HMGB1P16-201ENST00000447155 H3BPC8 53 aa2.78□□□□□ -1.96
HMGB1P16-201ENST00000447155 PSPHP1O15172 72 aa2.78□□□□□ -1.96
HMGB1P16-201ENST00000447155 IGKV4-1P06312 121 aa2.78□□□□□ -1.96
HMGB1P16-201ENST00000447155 LINC00269Q8N2A0 174 aa2.78□□□□□ -1.96
HMGB1P16-201ENST00000447155 Q9BRP9 147 aa2.78□□□□□ -1.96
HMGB1P16-201ENST00000447155 PKDREJQ9NTG1 2253 aa2.78□□□□□ -1.96
HMGB1P16-201ENST00000447155 WNK2Q9Y3S1 2297 aa2.78□□□□□ -1.96
HMGB1P16-201ENST00000447155 MAP1BP46821 2468 aaKnown RBP2.78□□□□□ -1.96
HMGB1P16-201ENST00000447155 BRCA2P51587 3418 aa2.77□□□□□ -1.97
HMGB1P16-201ENST00000447155 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P16-201ENST00000447155 IGHV3OR16-9A0A0B4J2B5 98 aa2.77□□□□□ -1.97
HMGB1P16-201ENST00000447155 IGKV3OR2-268A0A0C4DH90 116 aa2.77□□□□□ -1.97
HMGB1P16-201ENST00000447155 LCE6AA0A183 80 aa2.77□□□□□ -1.97
HMGB1P16-201ENST00000447155 ETDCA0A1B0GVM5 59 aa2.77□□□□□ -1.97
HMGB1P16-201ENST00000447155 A6NED7 52 aa2.77□□□□□ -1.97
HMGB1P16-201ENST00000447155 LYNX1G3V0Z9 82 aa2.77□□□□□ -1.97
HMGB1P16-201ENST00000447155 CHKB-CPT1BH3BT56 60 aa2.77□□□□□ -1.97
HMGB1P16-201ENST00000447155 PSCAO43653 123 aa2.77□□□□□ -1.97
HMGB1P16-201ENST00000447155 LYNX1P0DP58 116 aa2.77□□□□□ -1.97
HMGB1P16-201ENST00000447155 SYCNQ0VAF6 134 aa2.77□□□□□ -1.97
HMGB1P16-201ENST00000447155 Q6ZTI0 123 aa2.77□□□□□ -1.97
HMGB1P16-201ENST00000447155 SCXQ7RTU7 201 aa2.77□□□□□ -1.97
HMGB1P16-201ENST00000447155 SPANXA2-OT1Q8N9U9 137 aa2.77□□□□□ -1.97
HMGB1P16-201ENST00000447155 C1orf64Q8NEQ6 169 aa2.77□□□□□ -1.97
HMGB1P16-201ENST00000447155 SPTSSBQ8NFR3 76 aa2.77□□□□□ -1.97
HMGB1P16-201ENST00000447155 HIGD2AQ9BW72 106 aa2.77□□□□□ -1.97
HMGB1P16-201ENST00000447155 LINC00588Q9Y4M8 146 aa2.77□□□□□ -1.97
HMGB1P16-201ENST00000447155 CACNA1BQ00975 2339 aa2.77□□□□□ -1.97
HMGB1P16-201ENST00000447155 DOPEY2Q9Y3R5 2298 aa2.77□□□□□ -1.97
HMGB1P16-201ENST00000447155 PIEZO2Q9H5I5 2752 aa2.77□□□□□ -1.97
HMGB1P16-201ENST00000447155 CEP250Q9BV73 2442 aa2.77□□□□□ -1.97
HMGB1P16-201ENST00000447155 TRGV2A0A075B6R0 118 aa2.76□□□□□ -1.97
HMGB1P16-201ENST00000447155 A0A1W2PNU3 283 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P16-201ENST00000447155 M0R378 163 aa2.76□□□□□ -1.97
HMGB1P16-201ENST00000447155 FBXL19-AS1Q494R0 122 aa2.76□□□□□ -1.97
HMGB1P16-201ENST00000447155 CASC2Q6XLA1 102 aa2.76□□□□□ -1.97
HMGB1P16-201ENST00000447155 LCA10Q71F78 164 aa2.76□□□□□ -1.97
HMGB1P16-201ENST00000447155 PHF5AQ7RTV0 110 aaKnown RBP2.76□□□□□ -1.97
HMGB1P16-201ENST00000447155 LINC00208Q96KT6 92 aa2.76□□□□□ -1.97
HMGB1P16-201ENST00000447155 PRR15LQ9BU68 103 aa2.76□□□□□ -1.97
HMGB1P16-201ENST00000447155 KRTAP4-4Q9BYR3 166 aa2.76□□□□□ -1.97
HMGB1P16-201ENST00000447155 CDC42SE1Q9NRR8 79 aa2.76□□□□□ -1.97
HMGB1P16-201ENST00000447155 RANBP2P49792 3224 aaKnown RBP2.76□□□□□ -1.97
HMGB1P16-201ENST00000447155 TPRP12270 2363 aaKnown RBP2.75□□□□□ -1.97
HMGB1P16-201ENST00000447155 TRGV4A0A0C4DH28 118 aa2.75□□□□□ -1.97
HMGB1P16-201ENST00000447155 HCG22E2RYF7 251 aa2.75□□□□□ -1.97
HMGB1P16-201ENST00000447155 CMC4P56277 68 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P16-201ENST00000447155 DEFB131AP59861 70 aa2.75□□□□□ -1.97
HMGB1P16-201ENST00000447155 KLK12Q9UKR0 248 aa2.75□□□□□ -1.97
HMGB1P16-201ENST00000447155 TECTAO75443 2155 aa2.75□□□□□ -1.97
HMGB1P16-201ENST00000447155 MED13LQ71F56 2210 aa2.74□□□□□ -1.97
HMGB1P16-201ENST00000447155 SZT2Q5T011 3432 aa2.74□□□□□ -1.97
HMGB1P16-201ENST00000447155 SPTBN1Q01082 2364 aaKnown RBP2.74□□□□□ -1.97
HMGB1P16-201ENST00000447155 ANKHD1Q8IWZ3 2542 aaKnown RBP2.74□□□□□ -1.97
HMGB1P16-201ENST00000447155 A0A096LNT2 108 aa2.74□□□□□ -1.97
HMGB1P16-201ENST00000447155 LINC00959A0A1B0GUT2 108 aa2.74□□□□□ -1.97
HMGB1P16-201ENST00000447155 A8MUN3 132 aa2.74□□□□□ -1.97
HMGB1P16-201ENST00000447155 H3BUX3 64 aa2.74□□□□□ -1.97
HMGB1P16-201ENST00000447155 IGLV6-57P01721 117 aa2.74□□□□□ -1.97
HMGB1P16-201ENST00000447155 ASB16-AS1Q495Z4 193 aa2.74□□□□□ -1.97
HMGB1P16-201ENST00000447155 Q5VV11 94 aa2.74□□□□□ -1.97
HMGB1P16-201ENST00000447155 B9D2Q9BPU9 175 aa2.74□□□□□ -1.97
HMGB1P16-201ENST00000447155 RP1L1Q8IWN7 2480 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P16-201ENST00000447155 XIRP2A4UGR9 3374 aa2.73□□□□□ -1.97
HMGB1P16-201ENST00000447155 LY6EQ16553 131 aa2.73□□□□□ -1.97
HMGB1P16-201ENST00000447155 ZCCHC13Q8WW36 166 aaKnown RBP2.73□□□□□ -1.97
HMGB1P16-201ENST00000447155 UBE2E2Q96LR5 201 aa2.73□□□□□ -1.97
HMGB1P16-201ENST00000447155 GPR179Q6PRD1 2367 aa2.73□□□□□ -1.97
HMGB1P16-201ENST00000447155 MKI67P46013 3256 aaKnown RBP2.73□□□□□ -1.97
HMGB1P16-201ENST00000447155 DNAH14Q0VDD8 3507 aa2.72□□□□□ -1.97
HMGB1P16-201ENST00000447155 LOC101927531A0A1B0GV80 90 aa2.72□□□□□ -1.97
HMGB1P16-201ENST00000447155 A6NN06 94 aa2.72□□□□□ -1.97
HMGB1P16-201ENST00000447155 C8orf87E5RJ46 101 aa2.72□□□□□ -1.97
HMGB1P16-201ENST00000447155 SPAG11BQ08648 103 aa2.72□□□□□ -1.97
HMGB1P16-201ENST00000447155 WFDC10AQ9H1F0 79 aa2.72□□□□□ -1.97
HMGB1P16-201ENST00000447155 KCNQ1DNQ9H478 68 aa2.72□□□□□ -1.97
HMGB1P16-201ENST00000447155 IGLV4-60A0A075B6I1 120 aa2.71□□□□□ -1.98
HMGB1P16-201ENST00000447155 GVQW2A0A096LPI5 108 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P16-201ENST00000447155 C16orf90A8MZG2 172 aa2.71□□□□□ -1.98
HMGB1P16-201ENST00000447155 C3orf84H3BNL1 204 aa2.71□□□□□ -1.98
HMGB1P16-201ENST00000447155 DEFB116Q30KQ4 102 aa2.71□□□□□ -1.98
HMGB1P16-201ENST00000447155 LAMA2P24043 3122 aaKnown RBP2.7□□□□□ -1.98
HMGB1P16-201ENST00000447155 LRCOL1A6NCL2 159 aa2.7□□□□□ -1.98
HMGB1P16-201ENST00000447155 TLX1NBP0CAT3 122 aa2.7□□□□□ -1.98
HMGB1P16-201ENST00000447155 BRD3OSQ6XYD6 125 aa2.7□□□□□ -1.98
HMGB1P16-201ENST00000447155 ROS1P08922 2347 aa2.7□□□□□ -1.98
HMGB1P16-201ENST00000447155 CEP290O15078 2479 aa2.69□□□□□ -1.98
HMGB1P16-201ENST00000447155 M0R2N4 97 aa2.69□□□□□ -1.98
HMGB1P16-201ENST00000447155 PRM2P04554 102 aa2.69□□□□□ -1.98
HMGB1P16-201ENST00000447155 KPRPQ5T749 579 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P16-201ENST00000447155 C4orf3Q8WVX3 66 aa2.69□□□□□ -1.98
HMGB1P16-201ENST00000447155 NOP10Q9NPE3 64 aaKnown RBP2.69□□□□□ -1.98
HMGB1P16-201ENST00000447155 COL6A3P12111 3177 aa2.69□□□□□ -1.98
HMGB1P16-201ENST00000447155 ZZEF1O43149 2961 aa2.68□□□□□ -1.98
HMGB1P16-201ENST00000447155 NBEAQ8NFP9 2946 aa2.68□□□□□ -1.98
HMGB1P16-201ENST00000447155 REV3LO60673 3130 aa2.68□□□□□ -1.98
HMGB1P16-201ENST00000447155 H0Y9P7 68 aa2.68□□□□□ -1.98
HMGB1P16-201ENST00000447155 ANGP03950 147 aaKnown RBP2.68□□□□□ -1.98
HMGB1P16-201ENST00000447155 PRB1P04280 392 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms