RNA–Protein interactions for RNA: ENST00000445497.1

UBBP3-201, Transcript of ubiquitin B pseudogene 3, humanhuman

BASIC

Gene UBBP3, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP3-201ENST00000445497 KRTAP4-6Q9BYQ5 205 aa1.5□□□□□ -2.17
UBBP3-201ENST00000445497 CRIPTQ9P021 101 aa1.5□□□□□ -2.17
UBBP3-201ENST00000445497 SEC16AO15027 2179 aa1.49□□□□□ -2.17
UBBP3-201ENST00000445497 FREM1Q5H8C1 2179 aa1.49□□□□□ -2.17
UBBP3-201ENST00000445497 PRR14LQ5THK1 2151 aa1.49□□□□□ -2.17
UBBP3-201ENST00000445497 G3V318 75 aa1.49□□□□□ -2.17
UBBP3-201ENST00000445497 PRB2P02812 416 aaPredicted RBP1.49□□□□□ -2.17
UBBP3-201ENST00000445497 PRR9Q5T870 116 aa1.49□□□□□ -2.17
UBBP3-201ENST00000445497 LINC00575Q6W349 94 aa1.49□□□□□ -2.17
UBBP3-201ENST00000445497 PRRC2AP48634 2157 aaKnown RBP1.49□□□□□ -2.17
UBBP3-201ENST00000445497 SSC5DA1L4H1 1573 aa1.48□□□□□ -2.17
UBBP3-201ENST00000445497 KRTAP9-6A0A140TA67 174 aa1.48□□□□□ -2.17
UBBP3-201ENST00000445497 KRTAP9-7A8MTY7 169 aa1.48□□□□□ -2.17
UBBP3-201ENST00000445497 POLR2KP53803 58 aaKnown RBP1.48□□□□□ -2.17
UBBP3-201ENST00000445497 Q6ZRN7 208 aaPredicted RBP1.48□□□□□ -2.17
UBBP3-201ENST00000445497 USMG5Q96IX5 58 aa1.48□□□□□ -2.17
UBBP3-201ENST00000445497 COL4A2P08572 1712 aa1.48□□□□□ -2.17
UBBP3-201ENST00000445497 CEP192Q8TEP8 1941 aa1.47□□□□□ -2.17
UBBP3-201ENST00000445497 K7EQZ3 153 aa1.47□□□□□ -2.17
UBBP3-201ENST00000445497 KRTAP12-2P59991 146 aa1.47□□□□□ -2.17
UBBP3-201ENST00000445497 UBE2DNLQ8IWF7 75 aa1.47□□□□□ -2.17
UBBP3-201ENST00000445497 KRTAP4-12Q9BQ66 201 aa1.47□□□□□ -2.17
UBBP3-201ENST00000445497 TTTY10Q9BZA0 68 aa1.47□□□□□ -2.17
UBBP3-201ENST00000445497 BRWD1Q9NSI6 2320 aa1.47□□□□□ -2.17
UBBP3-201ENST00000445497 PLXNB2O15031 1838 aa1.46□□□□□ -2.18
UBBP3-201ENST00000445497 CCL22O00626 93 aa1.46□□□□□ -2.18
UBBP3-201ENST00000445497 KRTAP13-2Q52LG2 175 aa1.46□□□□□ -2.18
UBBP3-201ENST00000445497 ALPK2Q86TB3 2170 aa1.46□□□□□ -2.18
UBBP3-201ENST00000445497 MED13LQ71F56 2210 aa1.46□□□□□ -2.18
UBBP3-201ENST00000445497 KRTAP29-1A8MX34 341 aaPredicted RBP1.45□□□□□ -2.18
UBBP3-201ENST00000445497 MT3P25713 68 aa1.45□□□□□ -2.18
UBBP3-201ENST00000445497 DSCR10P59022 87 aa1.45□□□□□ -2.18
UBBP3-201ENST00000445497 MINOS1Q5TGZ0 78 aa1.45□□□□□ -2.18
UBBP3-201ENST00000445497 KRTAP9-4Q9BYQ2 154 aa1.45□□□□□ -2.18
UBBP3-201ENST00000445497 KRTAP4-8Q9BYQ9 185 aa1.45□□□□□ -2.18
UBBP3-201ENST00000445497 C6orf48Q9UBA6 75 aa1.45□□□□□ -2.18
UBBP3-201ENST00000445497 ZFHX3Q15911 3703 aa1.44□□□□□ -2.18
UBBP3-201ENST00000445497 ZFHX2Q9C0A1 2572 aaPredicted RBP1.44□□□□□ -2.18
UBBP3-201ENST00000445497 IGLV5-48A0A075B6I7 105 aa1.44□□□□□ -2.18
UBBP3-201ENST00000445497 PRB1P04280 392 aa1.44□□□□□ -2.18
UBBP3-201ENST00000445497 RPL37P61927 97 aaKnown RBP1.44□□□□□ -2.18
UBBP3-201ENST00000445497 PRCDQ00LT1 54 aa1.44□□□□□ -2.18
UBBP3-201ENST00000445497 LCE4AQ5TA78 99 aa1.44□□□□□ -2.18
UBBP3-201ENST00000445497 UNQ6190/PRO20217Q6UXQ8 127 aa1.44□□□□□ -2.18
UBBP3-201ENST00000445497 PRO3102Q9H379 93 aa1.44□□□□□ -2.18
UBBP3-201ENST00000445497 RTTNQ86VV8 2226 aa1.44□□□□□ -2.18
UBBP3-201ENST00000445497 GAS8-AS1O95177 125 aa1.43□□□□□ -2.18
UBBP3-201ENST00000445497 PIGYQ3MUY2 71 aa1.43□□□□□ -2.18
UBBP3-201ENST00000445497 MRPL34Q9BQ48 92 aaKnown RBP1.43□□□□□ -2.18
UBBP3-201ENST00000445497 GOLGA4Q13439 2230 aaKnown RBP1.43□□□□□ -2.18
UBBP3-201ENST00000445497 ADAMTS9Q9P2N4 1935 aa1.42□□□□□ -2.18
UBBP3-201ENST00000445497 TNRC6CQ9HCJ0 1690 aaKnown RBP1.42□□□□□ -2.18
UBBP3-201ENST00000445497 LCE3BQ5TA77 95 aa1.42□□□□□ -2.18
UBBP3-201ENST00000445497 IGFL1Q6UW32 110 aa1.42□□□□□ -2.18
UBBP3-201ENST00000445497 KRTAP9-3Q9BYQ3 159 aa1.42□□□□□ -2.18
UBBP3-201ENST00000445497 DEFB131AP59861 70 aa1.41□□□□□ -2.18
UBBP3-201ENST00000445497 RPL39P62891 51 aaKnown RBP1.41□□□□□ -2.18
UBBP3-201ENST00000445497 DEFB123Q8N688 67 aa1.41□□□□□ -2.18
UBBP3-201ENST00000445497 KRTAP9-9Q9BYP9 154 aa1.41□□□□□ -2.18
UBBP3-201ENST00000445497 KRTAP9-2Q9BYQ4 174 aa1.41□□□□□ -2.18
UBBP3-201ENST00000445497 F5P12259 2224 aa1.41□□□□□ -2.18
UBBP3-201ENST00000445497 ATRXP46100 2492 aa1.4□□□□□ -2.19
UBBP3-201ENST00000445497 H3BSH0 61 aa1.4□□□□□ -2.19
UBBP3-201ENST00000445497 PRB3Q04118 309 aaPredicted RBP1.4□□□□□ -2.19
UBBP3-201ENST00000445497 KNTC1P50748 2209 aa1.39□□□□□ -2.19
UBBP3-201ENST00000445497 KRTAP1-4P0C5Y4 121 aa1.39□□□□□ -2.19
UBBP3-201ENST00000445497 LYNX1P0DP58 116 aa1.39□□□□□ -2.19
UBBP3-201ENST00000445497 BRD3OSQ6XYD6 125 aa1.39□□□□□ -2.19
UBBP3-201ENST00000445497 RPL39LQ96EH5 51 aaKnown RBP1.39□□□□□ -2.19
UBBP3-201ENST00000445497 COL4A4P53420 1690 aaPredicted RBP1.39□□□□□ -2.19
UBBP3-201ENST00000445497 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.38□□□□□ -2.19
UBBP3-201ENST00000445497 I3L2K1 104 aa1.38□□□□□ -2.19
UBBP3-201ENST00000445497 M0QY20 66 aa1.38□□□□□ -2.19
UBBP3-201ENST00000445497 KRTAP10-8P60410 259 aa1.38□□□□□ -2.19
UBBP3-201ENST00000445497 PCOTHQ58A44 107 aa1.38□□□□□ -2.19
UBBP3-201ENST00000445497 WFDC10BQ8IUB3 73 aa1.38□□□□□ -2.19
UBBP3-201ENST00000445497 ANKRD17O75179 2603 aaKnown RBP1.38□□□□□ -2.19
UBBP3-201ENST00000445497 H3BUA1 57 aa1.37□□□□□ -2.19
UBBP3-201ENST00000445497 SPINK9Q5DT21 86 aa1.37□□□□□ -2.19
UBBP3-201ENST00000445497 LCE5AQ5TCM9 118 aa1.37□□□□□ -2.19
UBBP3-201ENST00000445497 WFDC13Q8IUB5 93 aa1.37□□□□□ -2.19
UBBP3-201ENST00000445497 H0YAA0 97 aa1.36□□□□□ -2.19
UBBP3-201ENST00000445497 RPS27P42677 84 aaKnown RBP1.36□□□□□ -2.19
UBBP3-201ENST00000445497 FN1P02751 2386 aaKnown RBP1.36□□□□□ -2.19
UBBP3-201ENST00000445497 CACNA1CQ13936 2221 aa1.36□□□□□ -2.19
UBBP3-201ENST00000445497 COX6A2Q02221 97 aa1.35□□□□□ -2.19
UBBP3-201ENST00000445497 DEFB109BQ30KR1 87 aa1.35□□□□□ -2.19
UBBP3-201ENST00000445497 H1FX-AS1Q4G0G2 97 aa1.35□□□□□ -2.19
UBBP3-201ENST00000445497 Q6ZSA8 131 aa1.35□□□□□ -2.19
UBBP3-201ENST00000445497 KRTAP1-3Q8IUG1 177 aa1.35□□□□□ -2.19
UBBP3-201ENST00000445497 URB1O60287 2271 aaKnown RBP1.35□□□□□ -2.19
UBBP3-201ENST00000445497 PDE4DIPQ5VU43 2346 aa1.34□□□□□ -2.19
UBBP3-201ENST00000445497 TECTAO75443 2155 aa1.34□□□□□ -2.19
UBBP3-201ENST00000445497 SHANK1Q9Y566 2161 aa1.34□□□□□ -2.19
UBBP3-201ENST00000445497 K7EIM0 57 aa1.34□□□□□ -2.19
UBBP3-201ENST00000445497 DEFB106AQ8N104 65 aa1.34□□□□□ -2.19
UBBP3-201ENST00000445497 TMEM167AQ8TBQ9 72 aa1.34□□□□□ -2.19
UBBP3-201ENST00000445497 LEAP2Q969E1 77 aa1.34□□□□□ -2.19
UBBP3-201ENST00000445497 CACNA1EQ15878 2313 aa1.34□□□□□ -2.2
UBBP3-201ENST00000445497 KRTAP13-4Q3LI77 160 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms