RNA–Protein interactions for RNA: ENST00000444942.1

LINC00642-203, long intergenic non-protein coding RNA 642, humanhuman

TSL 1 (best)

Gene LINC00642, Length 1,376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-203ENST00000444942 C1orf43Q9BWL3 253 aa6.11□□□□□ -1.43
LINC00642-203ENST00000444942 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.1□□□□□ -1.43
LINC00642-203ENST00000444942 A0A0B4J2C4 111 aa6.1□□□□□ -1.43
LINC00642-203ENST00000444942 LRCOL1A6NCL2 159 aa6.1□□□□□ -1.43
LINC00642-203ENST00000444942 IFITM1P13164 125 aa6.1□□□□□ -1.43
LINC00642-203ENST00000444942 MEIG1Q5JSS6 88 aa6.1□□□□□ -1.43
LINC00642-203ENST00000444942 LYRM7Q5U5X0 104 aa6.1□□□□□ -1.43
LINC00642-203ENST00000444942 COX7B2Q8TF08 81 aa6.1□□□□□ -1.43
LINC00642-203ENST00000444942 COPS9Q8WXC6 57 aa6.1□□□□□ -1.43
LINC00642-203ENST00000444942 RMI2Q96E14 147 aa6.1□□□□□ -1.43
LINC00642-203ENST00000444942 TNXBP22105 4242 aa6.09□□□□□ -1.43
LINC00642-203ENST00000444942 A0A087WZ39 114 aa6.09□□□□□ -1.43
LINC00642-203ENST00000444942 IGHV3OR16-9A0A0B4J2B5 98 aa6.09□□□□□ -1.43
LINC00642-203ENST00000444942 TSPAN13O95857 204 aa6.09□□□□□ -1.43
LINC00642-203ENST00000444942 PRSS2P07478 247 aa6.09□□□□□ -1.43
LINC00642-203ENST00000444942 CFC1BP0CG36 223 aa6.09□□□□□ -1.43
LINC00642-203ENST00000444942 CFC1P0CG37 223 aa6.09□□□□□ -1.43
LINC00642-203ENST00000444942 REG3AQ06141 175 aa6.09□□□□□ -1.43
LINC00642-203ENST00000444942 ZNF625Q96I27 306 aaPredicted RBP6.09□□□□□ -1.43
LINC00642-203ENST00000444942 PRO1854Q9UHT4 67 aa6.09□□□□□ -1.43
LINC00642-203ENST00000444942 SFTA2Q6UW10 78 aa6.08□□□□□ -1.44
LINC00642-203ENST00000444942 C5orf38Q86SI9 138 aa6.08□□□□□ -1.44
LINC00642-203ENST00000444942 LINC01561Q8N1V8 128 aa6.08□□□□□ -1.44
LINC00642-203ENST00000444942 TOMM7Q9P0U1 55 aa6.08□□□□□ -1.44
LINC00642-203ENST00000444942 XCL1P47992 114 aa6.07□□□□□ -1.44
LINC00642-203ENST00000444942 ADAMTSL4-AS1Q5T5F5 129 aa6.07□□□□□ -1.44
LINC00642-203ENST00000444942 Q8N814 137 aa6.07□□□□□ -1.44
LINC00642-203ENST00000444942 IGLV5-52A0A0A0MRZ9 124 aa6.06□□□□□ -1.44
LINC00642-203ENST00000444942 NPC2P61916 151 aa6.06□□□□□ -1.44
LINC00642-203ENST00000444942 Q1RN00 199 aa6.06□□□□□ -1.44
LINC00642-203ENST00000444942 PRR34Q9NV39 138 aa6.06□□□□□ -1.44
LINC00642-203ENST00000444942 ERG28Q9UKR5 140 aa6.06□□□□□ -1.44
LINC00642-203ENST00000444942 DNAH8Q96JB1 4490 aa6.06□□□□□ -1.44
LINC00642-203ENST00000444942 LOC107984156A0A0G2JMH3 177 aa6.06□□□□□ -1.44
LINC00642-203ENST00000444942 LINC01620Q4KN68 170 aa6.06□□□□□ -1.44
LINC00642-203ENST00000444942 CD164L2Q6UWJ8 174 aa6.06□□□□□ -1.44
LINC00642-203ENST00000444942 ARL17AQ8IVW1 177 aa6.06□□□□□ -1.44
LINC00642-203ENST00000444942 DAND5Q8N907 189 aa6.06□□□□□ -1.44
LINC00642-203ENST00000444942 LINC00308Q8TCZ7 52 aa6.06□□□□□ -1.44
LINC00642-203ENST00000444942 CHCHD10Q8WYQ3 142 aaPredicted RBP6.06□□□□□ -1.44
LINC00642-203ENST00000444942 A0A0U1RRA0 63 aa6.05□□□□□ -1.44
LINC00642-203ENST00000444942 GAGE12HA6NDE8 117 aa6.05□□□□□ -1.44
LINC00642-203ENST00000444942 USP17L23D6RBM5 183 aa6.05□□□□□ -1.44
LINC00642-203ENST00000444942 COX7A2LO14548 114 aa6.05□□□□□ -1.44
LINC00642-203ENST00000444942 EIF4EBP3O60516 100 aaPredicted RBP6.05□□□□□ -1.44
LINC00642-203ENST00000444942 PSMB2P49721 201 aa6.05□□□□□ -1.44
LINC00642-203ENST00000444942 Q8IZM0 81 aa6.05□□□□□ -1.44
LINC00642-203ENST00000444942 PPDPFQ9H3Y8 114 aa6.05□□□□□ -1.44
LINC00642-203ENST00000444942 H7C2G1 150 aa6.04□□□□□ -1.44
LINC00642-203ENST00000444942 MALP21145 153 aa6.04□□□□□ -1.44
LINC00642-203ENST00000444942 C6orf226Q5I0X4 101 aa6.04□□□□□ -1.44
LINC00642-203ENST00000444942 CFAP161Q6P656 301 aa6.04□□□□□ -1.44
LINC00642-203ENST00000444942 KRTAP26-1Q6PEX3 210 aa6.04□□□□□ -1.44
LINC00642-203ENST00000444942 TRBV20-1A0A075B6N2 111 aa6.03□□□□□ -1.44
LINC00642-203ENST00000444942 TRAV8-4A0A0B4J246 113 aa6.03□□□□□ -1.44
LINC00642-203ENST00000444942 SCGB1C2P0DMR2 95 aa6.03□□□□□ -1.44
LINC00642-203ENST00000444942 CXCL5P42830 114 aa6.03□□□□□ -1.44
LINC00642-203ENST00000444942 LINC00158P58513 81 aa6.03□□□□□ -1.44
LINC00642-203ENST00000444942 F8W1H4 67 aa6.02□□□□□ -1.45
LINC00642-203ENST00000444942 H3BMG7 143 aa6.02□□□□□ -1.45
LINC00642-203ENST00000444942 RPL13AP40429 203 aaKnown RBP6.02□□□□□ -1.45
LINC00642-203ENST00000444942 CKS1BP61024 79 aa6.02□□□□□ -1.45
LINC00642-203ENST00000444942 LINC00528Q8N1L1 170 aa6.02□□□□□ -1.45
LINC00642-203ENST00000444942 MIR7-3HGQ8N6C7 128 aa6.02□□□□□ -1.45
LINC00642-203ENST00000444942 FOXI1Q12951 378 aa6.01□□□□□ -1.45
LINC00642-203ENST00000444942 SOSTDC1Q6X4U4 206 aa6.01□□□□□ -1.45
LINC00642-203ENST00000444942 NTN5Q8WTR8 489 aaPredicted RBP6.01□□□□□ -1.45
LINC00642-203ENST00000444942 TRBV30A0A0K0K1B3 111 aa6□□□□□ -1.45
LINC00642-203ENST00000444942 TCL1BO95988 128 aa6□□□□□ -1.45
LINC00642-203ENST00000444942 COX6CP09669 75 aa6□□□□□ -1.45
LINC00642-203ENST00000444942 HIGD2BQ4VC39 106 aa6□□□□□ -1.45
LINC00642-203ENST00000444942 C14orf177Q52M58 125 aa6□□□□□ -1.45
LINC00642-203ENST00000444942 TRIAP1O43715 76 aa5.99□□□□□ -1.45
LINC00642-203ENST00000444942 PFN2P35080 140 aa5.99□□□□□ -1.45
LINC00642-203ENST00000444942 KRTAP10-4P60372 401 aaPredicted RBP5.99□□□□□ -1.45
LINC00642-203ENST00000444942 SPAG11BQ08648 103 aa5.99□□□□□ -1.45
LINC00642-203ENST00000444942 OCIAD2Q56VL3 154 aa5.99□□□□□ -1.45
LINC00642-203ENST00000444942 LINC00526Q96FQ7 95 aa5.99□□□□□ -1.45
LINC00642-203ENST00000444942 FAM30AQ9NZY2 134 aa5.99□□□□□ -1.45
LINC00642-203ENST00000444942 TRAV13-2A0A0B4J235 113 aa5.98□□□□□ -1.45
LINC00642-203ENST00000444942 K7ERU9 68 aa5.98□□□□□ -1.45
LINC00642-203ENST00000444942 MT1HL1P0DM35 61 aa5.98□□□□□ -1.45
LINC00642-203ENST00000444942 KIAA0087Q14695 138 aa5.98□□□□□ -1.45
LINC00642-203ENST00000444942 ATXN8Q156A1 80 aa5.98□□□□□ -1.45
LINC00642-203ENST00000444942 C2orf82Q6UX34 121 aa5.98□□□□□ -1.45
LINC00642-203ENST00000444942 C15orf56Q8N910 161 aa5.98□□□□□ -1.45
LINC00642-203ENST00000444942 SND1-IT1Q9HBX3 110 aa5.98□□□□□ -1.45
LINC00642-203ENST00000444942 COX17Q14061 63 aa5.97□□□□□ -1.45
LINC00642-203ENST00000444942 PRO0461Q9UI25 63 aa5.97□□□□□ -1.45
LINC00642-203ENST00000444942 MTURNQ8N3F0 131 aa5.96□□□□□ -1.45
LINC00642-203ENST00000444942 SLPIP03973 132 aa5.95□□□□□ -1.46
LINC00642-203ENST00000444942 C9JAW5 83 aa5.94□□□□□ -1.46
LINC00642-203ENST00000444942 CRCT1Q9UGL9 99 aa5.94□□□□□ -1.46
LINC00642-203ENST00000444942 FSIP2Q5CZC0 6907 aa5.94□□□□□ -1.46
LINC00642-203ENST00000444942 J3QR89 54 aa5.93□□□□□ -1.46
LINC00642-203ENST00000444942 SLC25A20O43772 301 aa5.93□□□□□ -1.46
LINC00642-203ENST00000444942 RNF151Q2KHN1 245 aa5.93□□□□□ -1.46
LINC00642-203ENST00000444942 ETDBQ3ZM63 59 aa5.93□□□□□ -1.46
LINC00642-203ENST00000444942 LINC00337Q8N6G1 96 aa5.93□□□□□ -1.46
LINC00642-203ENST00000444942 IGKV2-28A0A075B6P5 120 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms