RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 DOCK10Q96BY6 2186 aa2.34□□□□□ -2.03
CDC42BPA-207ENST00000441725 IGKV3D-7A0A0C4DH55 119 aa2.34□□□□□ -2.04
CDC42BPA-207ENST00000441725 A0A1W2PNM2 257 aa2.34□□□□□ -2.04
CDC42BPA-207ENST00000441725 ODF3BA8MYP8 253 aa2.34□□□□□ -2.04
CDC42BPA-207ENST00000441725 D6R8Y8 96 aa2.34□□□□□ -2.04
CDC42BPA-207ENST00000441725 IGHV3-53P01767 116 aa2.34□□□□□ -2.04
CDC42BPA-207ENST00000441725 LINC00315P59091 139 aa2.34□□□□□ -2.04
CDC42BPA-207ENST00000441725 KRTAP26-1Q6PEX3 210 aa2.34□□□□□ -2.04
CDC42BPA-207ENST00000441725 SPINT4Q6UDR6 99 aa2.34□□□□□ -2.04
CDC42BPA-207ENST00000441725 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.34□□□□□ -2.04
CDC42BPA-207ENST00000441725 MUSTN1Q8IVN3 82 aa2.34□□□□□ -2.04
CDC42BPA-207ENST00000441725 OTOGQ6ZRI0 2925 aa2.34□□□□□ -2.04
CDC42BPA-207ENST00000441725 LRRK2Q5S007 2527 aa2.34□□□□□ -2.04
CDC42BPA-207ENST00000441725 TNRC6BQ9UPQ9 1833 aaKnown RBP2.33□□□□□ -2.04
CDC42BPA-207ENST00000441725 SHANK1Q9Y566 2161 aa2.33□□□□□ -2.04
CDC42BPA-207ENST00000441725 IGKV2-28A0A075B6P5 120 aa2.33□□□□□ -2.04
CDC42BPA-207ENST00000441725 LRCOL1A6NCL2 159 aa2.33□□□□□ -2.04
CDC42BPA-207ENST00000441725 IGKV2D-28P01615 120 aa2.33□□□□□ -2.04
CDC42BPA-207ENST00000441725 IFI6P09912 130 aa2.33□□□□□ -2.04
CDC42BPA-207ENST00000441725 FCER1GP30273 86 aa2.33□□□□□ -2.04
CDC42BPA-207ENST00000441725 TMEM254Q8TBM7 123 aa2.33□□□□□ -2.04
CDC42BPA-207ENST00000441725 PRR15LQ9BU68 103 aa2.33□□□□□ -2.04
CDC42BPA-207ENST00000441725 ABCA4P78363 2273 aa2.33□□□□□ -2.04
CDC42BPA-207ENST00000441725 MGAQ8IWI9 3026 aa2.33□□□□□ -2.04
CDC42BPA-207ENST00000441725 KRTAP25-1Q3LHN0 102 aa2.33□□□□□ -2.04
CDC42BPA-207ENST00000441725 MUC5BQ9HC84 5762 aaPredicted RBP2.32□□□□□ -2.04
CDC42BPA-207ENST00000441725 PDZD2O15018 2839 aa2.32□□□□□ -2.04
CDC42BPA-207ENST00000441725 CELSR1Q9NYQ6 3014 aa2.32□□□□□ -2.04
CDC42BPA-207ENST00000441725 IGHV3-33P01772 117 aa2.32□□□□□ -2.04
CDC42BPA-207ENST00000441725 ATMQ13315 3056 aa2.32□□□□□ -2.04
CDC42BPA-207ENST00000441725 USP9YO00507 2555 aaPredicted RBP2.32□□□□□ -2.04
CDC42BPA-207ENST00000441725 F8P00451 2351 aa2.32□□□□□ -2.04
CDC42BPA-207ENST00000441725 TRBV30A0A0K0K1B3 111 aa2.32□□□□□ -2.04
CDC42BPA-207ENST00000441725 SAA2P0DJI9 122 aaPredicted RBP2.32□□□□□ -2.04
CDC42BPA-207ENST00000441725 SNRPGP62308 76 aaKnown RBP2.32□□□□□ -2.04
CDC42BPA-207ENST00000441725 C9orf163Q8N9P6 203 aa2.32□□□□□ -2.04
CDC42BPA-207ENST00000441725 BOD1L1Q8NFC6 3051 aa2.31□□□□□ -2.04
CDC42BPA-207ENST00000441725 UNC13CQ8NB66 2214 aa2.31□□□□□ -2.04
CDC42BPA-207ENST00000441725 SPANXN5Q5MJ07 72 aa2.31□□□□□ -2.04
CDC42BPA-207ENST00000441725 CENPEQ02224 2701 aa2.31□□□□□ -2.04
CDC42BPA-207ENST00000441725 ADGRG4Q8IZF6 3080 aa2.31□□□□□ -2.04
CDC42BPA-207ENST00000441725 ATRQ13535 2644 aa2.31□□□□□ -2.04
CDC42BPA-207ENST00000441725 MTORP42345 2549 aa2.31□□□□□ -2.04
CDC42BPA-207ENST00000441725 COL5A1P20908 1838 aaPredicted RBP2.31□□□□□ -2.04
CDC42BPA-207ENST00000441725 TRAV1-2A0A0B4J238 106 aa2.3□□□□□ -2.04
CDC42BPA-207ENST00000441725 M0R3E3 92 aa2.3□□□□□ -2.04
CDC42BPA-207ENST00000441725 KRTAP10-3P60369 221 aa2.3□□□□□ -2.04
CDC42BPA-207ENST00000441725 ZNF833PQ6ZTB9 187 aa2.3□□□□□ -2.04
CDC42BPA-207ENST00000441725 FN1P02751 2386 aaKnown RBP2.3□□□□□ -2.04
CDC42BPA-207ENST00000441725 NIPBLQ6KC79 2804 aaeCLIP2.3□□□□□ -2.04
CDC42BPA-207ENST00000441725 SDK1Q7Z5N4 2213 aa2.3□□□□□ -2.04
CDC42BPA-207ENST00000441725 SPENQ96T58 3664 aaKnown RBP2.3□□□□□ -2.04
CDC42BPA-207ENST00000441725 LAMA1P25391 3075 aa2.3□□□□□ -2.04
CDC42BPA-207ENST00000441725 APC2O95996 2303 aa2.3□□□□□ -2.04
CDC42BPA-207ENST00000441725 A0A1B0GU33 70 aa2.3□□□□□ -2.04
CDC42BPA-207ENST00000441725 R4GN34 69 aa2.3□□□□□ -2.04
CDC42BPA-207ENST00000441725 V9GYV3 84 aa2.3□□□□□ -2.04
CDC42BPA-207ENST00000441725 COL6A6A6NMZ7 2263 aa2.3□□□□□ -2.04
CDC42BPA-207ENST00000441725 HIVEP1P15822 2718 aa2.3□□□□□ -2.04
CDC42BPA-207ENST00000441725 ARFGEF3Q5TH69 2177 aa2.3□□□□□ -2.04
CDC42BPA-207ENST00000441725 A0A0J9YY99 117 aa2.29□□□□□ -2.04
CDC42BPA-207ENST00000441725 TRBV10-1A0A0K0K1A3 114 aa2.29□□□□□ -2.04
CDC42BPA-207ENST00000441725 PPP1R17O96001 155 aa2.29□□□□□ -2.04
CDC42BPA-207ENST00000441725 IGKV1-17P01599 117 aa2.29□□□□□ -2.04
CDC42BPA-207ENST00000441725 LYPD1Q8N2G4 141 aa2.29□□□□□ -2.04
CDC42BPA-207ENST00000441725 ACACAQ13085 2346 aa2.29□□□□□ -2.04
CDC42BPA-207ENST00000441725 CRYBG3Q68DQ2 2970 aa2.29□□□□□ -2.04
CDC42BPA-207ENST00000441725 IGHV3-64A0A075B6Q5 118 aa2.29□□□□□ -2.04
CDC42BPA-207ENST00000441725 TRAV12-1A0A0B4J245 112 aa2.29□□□□□ -2.04
CDC42BPA-207ENST00000441725 A0A0J9YX75 114 aa2.29□□□□□ -2.04
CDC42BPA-207ENST00000441725 TRBV6-5A0A0K0K1A5 114 aa2.29□□□□□ -2.04
CDC42BPA-207ENST00000441725 SMIM27A0A1W2PRY6 76 aa2.29□□□□□ -2.04
CDC42BPA-207ENST00000441725 IGHV3-30P01768 117 aa2.29□□□□□ -2.04
CDC42BPA-207ENST00000441725 IGHV3-30-5P0DP03 117 aa2.29□□□□□ -2.04
CDC42BPA-207ENST00000441725 LCE3EQ5T5B0 92 aa2.29□□□□□ -2.04
CDC42BPA-207ENST00000441725 TTTY12Q9BZ98 90 aa2.29□□□□□ -2.04
CDC42BPA-207ENST00000441725 ORMDL1Q9P0S3 153 aa2.29□□□□□ -2.04
CDC42BPA-207ENST00000441725 LHFPL6Q9Y693 200 aa2.29□□□□□ -2.04
CDC42BPA-207ENST00000441725 CELSR2Q9HCU4 2923 aa2.28□□□□□ -2.04
CDC42BPA-207ENST00000441725 ELOF1P60002 83 aaKnown RBP2.28□□□□□ -2.04
CDC42BPA-207ENST00000441725 SPAG11BQ08648 103 aa2.28□□□□□ -2.04
CDC42BPA-207ENST00000441725 SPAG11AQ6PDA7 123 aa2.28□□□□□ -2.04
CDC42BPA-207ENST00000441725 LENEPQ9Y5L5 61 aa2.28□□□□□ -2.04
CDC42BPA-207ENST00000441725 STAB1Q9NY15 2570 aa2.28□□□□□ -2.05
CDC42BPA-207ENST00000441725 HIGD1CA8MV81 97 aa2.27□□□□□ -2.05
CDC42BPA-207ENST00000441725 LY6EQ16553 131 aa2.27□□□□□ -2.05
CDC42BPA-207ENST00000441725 LINC00846Q9NV44 126 aa2.27□□□□□ -2.05
CDC42BPA-207ENST00000441725 MRPL36Q9P0J6 103 aaKnown RBP2.27□□□□□ -2.05
CDC42BPA-207ENST00000441725 ANKHD1Q8IWZ3 2542 aaKnown RBP2.27□□□□□ -2.05
CDC42BPA-207ENST00000441725 CSMD1Q96PZ7 3565 aa2.27□□□□□ -2.05
CDC42BPA-207ENST00000441725 HIVEP3Q5T1R4 2406 aa2.27□□□□□ -2.05
CDC42BPA-207ENST00000441725 URB1O60287 2271 aaKnown RBP2.27□□□□□ -2.05
CDC42BPA-207ENST00000441725 PKD1L1Q8TDX9 2849 aa2.27□□□□□ -2.05
CDC42BPA-207ENST00000441725 IGKV3-7A0A075B6H7 116 aa2.27□□□□□ -2.05
CDC42BPA-207ENST00000441725 A0A1W2PNU3 283 aaPredicted RBP2.27□□□□□ -2.05
CDC42BPA-207ENST00000441725 ERHP84090 104 aaKnown RBP2.27□□□□□ -2.05
CDC42BPA-207ENST00000441725 C1orf137Q5JT78 98 aa2.27□□□□□ -2.05
CDC42BPA-207ENST00000441725 TMEM263Q8WUH6 116 aaKnown RBP2.27□□□□□ -2.05
CDC42BPA-207ENST00000441725 NBEAL2Q6ZNJ1 2754 aa2.27□□□□□ -2.05
CDC42BPA-207ENST00000441725 DEFB103AP81534 67 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms