RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 BCE1O60756 84 aa11.05□□□□□ -0.64
DHFR-201ENST00000439211 IBA57-AS1B1ANH7 110 aa11.05□□□□□ -0.64
DHFR-201ENST00000439211 PRR4Q16378 134 aa11.05□□□□□ -0.64
DHFR-201ENST00000439211 FAM229BQ4G0N7 80 aa11.05□□□□□ -0.64
DHFR-201ENST00000439211 USP24Q9UPU5 2620 aa11.05□□□□□ -0.64
DHFR-201ENST00000439211 TRBV6-4A0A1B0GX49 114 aa11.05□□□□□ -0.64
DHFR-201ENST00000439211 OBSCN-AS1Q96MR7 158 aa11.05□□□□□ -0.64
DHFR-201ENST00000439211 NBEAL2Q6ZNJ1 2754 aa11.05□□□□□ -0.64
DHFR-201ENST00000439211 VPS13CQ709C8 3753 aa11.04□□□□□ -0.64
DHFR-201ENST00000439211 CMC4P56277 68 aaPredicted RBP11.04□□□□□ -0.64
DHFR-201ENST00000439211 CSMD2Q7Z408 3487 aa11.04□□□□□ -0.64
DHFR-201ENST00000439211 IGLV10-54A0A075B6I4 117 aa11.03□□□□□ -0.64
DHFR-201ENST00000439211 GYPEP15421 78 aa11.03□□□□□ -0.64
DHFR-201ENST00000439211 GCN1Q92616 2671 aaKnown RBP11.02□□□□□ -0.64
DHFR-201ENST00000439211 DEFB4AO15263 64 aa11.02□□□□□ -0.65
DHFR-201ENST00000439211 IGLV4-60A0A075B6I1 120 aa11.01□□□□□ -0.65
DHFR-201ENST00000439211 A0A096LNT2 108 aa11.01□□□□□ -0.65
DHFR-201ENST00000439211 FAM19A3Q7Z5A8 133 aa11.01□□□□□ -0.65
DHFR-201ENST00000439211 Q8N9L7 120 aa11□□□□□ -0.65
DHFR-201ENST00000439211 TRBV6-8A0A0A6YYG3 113 aa10.99□□□□□ -0.65
DHFR-201ENST00000439211 ZNF561-AS1K7EIQ3 104 aa10.99□□□□□ -0.65
DHFR-201ENST00000439211 NANOS2P60321 138 aaKnown RBP10.99□□□□□ -0.65
DHFR-201ENST00000439211 CD164Q04900 197 aa10.99□□□□□ -0.65
DHFR-201ENST00000439211 EPM2AB3EWF7 344 aa10.99□□□□□ -0.65
DHFR-201ENST00000439211 LINC01006Q8NI28 216 aa10.99□□□□□ -0.65
DHFR-201ENST00000439211 Q6ZQY7 126 aa10.98□□□□□ -0.65
DHFR-201ENST00000439211 HIGD2AQ9BW72 106 aa10.98□□□□□ -0.65
DHFR-201ENST00000439211 FSHBP01225 129 aa10.97□□□□□ -0.65
DHFR-201ENST00000439211 A8MTW9 85 aa10.97□□□□□ -0.65
DHFR-201ENST00000439211 ANGP03950 147 aaKnown RBP10.97□□□□□ -0.65
DHFR-201ENST00000439211 PDE6GP18545 87 aa10.97□□□□□ -0.65
DHFR-201ENST00000439211 CELA1Q9UNI1 258 aa10.97□□□□□ -0.65
DHFR-201ENST00000439211 FLNBO75369 2602 aaKnown RBP10.96□□□□□ -0.65
DHFR-201ENST00000439211 Q6ZQT0 140 aa10.96□□□□□ -0.66
DHFR-201ENST00000439211 CXCL6P80162 114 aa10.94□□□□□ -0.66
DHFR-201ENST00000439211 M0R2N4 97 aa10.94□□□□□ -0.66
DHFR-201ENST00000439211 IGHV4-28A0A0C4DH34 117 aa10.92□□□□□ -0.66
DHFR-201ENST00000439211 PRR15Q8IV56 129 aa10.92□□□□□ -0.66
DHFR-201ENST00000439211 FAM30AQ9NZY2 134 aa10.92□□□□□ -0.66
DHFR-201ENST00000439211 F8P00451 2351 aa10.92□□□□□ -0.66
DHFR-201ENST00000439211 HECTD1Q9ULT8 2610 aa10.92□□□□□ -0.66
DHFR-201ENST00000439211 LINC00959A0A1B0GUT2 108 aa10.91□□□□□ -0.66
DHFR-201ENST00000439211 DEFB135Q30KP9 77 aa10.9□□□□□ -0.66
DHFR-201ENST00000439211 LINC00269Q8N2A0 174 aa10.9□□□□□ -0.66
DHFR-201ENST00000439211 TRBV7-4A0A0J9YYF1 115 aa10.9□□□□□ -0.66
DHFR-201ENST00000439211 CHKB-CPT1BH3BT56 60 aa10.9□□□□□ -0.66
DHFR-201ENST00000439211 J3QKU1 62 aa10.9□□□□□ -0.66
DHFR-201ENST00000439211 NIPBLQ6KC79 2804 aaeCLIP10.89□□□□□ -0.67
DHFR-201ENST00000439211 MUC7Q8TAX7 377 aa10.89□□□□□ -0.67
DHFR-201ENST00000439211 IGLV1-51P01701 117 aa10.88□□□□□ -0.67
DHFR-201ENST00000439211 SMR3AQ99954 134 aa10.88□□□□□ -0.67
DHFR-201ENST00000439211 PRO0255Q9UI72 69 aa10.88□□□□□ -0.67
DHFR-201ENST00000439211 ATRQ13535 2644 aa10.87□□□□□ -0.67
DHFR-201ENST00000439211 IGHV3OR16-9A0A0B4J2B5 98 aa10.87□□□□□ -0.67
DHFR-201ENST00000439211 C3orf84H3BNL1 204 aa10.87□□□□□ -0.67
DHFR-201ENST00000439211 SETXQ7Z333 2677 aaKnown RBP10.86□□□□□ -0.67
DHFR-201ENST00000439211 LINC00575Q6W349 94 aa10.86□□□□□ -0.67
DHFR-201ENST00000439211 CR1P17927 2039 aa10.86□□□□□ -0.67
DHFR-201ENST00000439211 HIGD2BQ4VC39 106 aa10.85□□□□□ -0.67
DHFR-201ENST00000439211 SPATA3Q8NHX4 192 aa10.85□□□□□ -0.67
DHFR-201ENST00000439211 APCP25054 2843 aa10.85□□□□□ -0.67
DHFR-201ENST00000439211 GIG44P09565 113 aaPredicted RBP10.85□□□□□ -0.67
DHFR-201ENST00000439211 UBE2BP63146 152 aa10.85□□□□□ -0.67
DHFR-201ENST00000439211 A8MUN3 132 aa10.84□□□□□ -0.67
DHFR-201ENST00000439211 C9orf116Q5BN46 136 aaPredicted RBP10.84□□□□□ -0.67
DHFR-201ENST00000439211 HELZ2Q9BYK8 2649 aaKnown RBP10.83□□□□□ -0.68
DHFR-201ENST00000439211 DIRC1Q969H9 104 aa10.83□□□□□ -0.68
DHFR-201ENST00000439211 CHCHD10Q8WYQ3 142 aaPredicted RBP10.82□□□□□ -0.68
DHFR-201ENST00000439211 LOC110117498A0A087WWA1 95 aa10.82□□□□□ -0.68
DHFR-201ENST00000439211 Q6ZRU5 148 aa10.82□□□□□ -0.68
DHFR-201ENST00000439211 ITPR2Q14571 2701 aa10.81□□□□□ -0.68
DHFR-201ENST00000439211 C1orf64Q8NEQ6 169 aa10.81□□□□□ -0.68
DHFR-201ENST00000439211 REG3AQ06141 175 aa10.81□□□□□ -0.68
DHFR-201ENST00000439211 C6orf223Q8N319 242 aa10.81□□□□□ -0.68
DHFR-201ENST00000439211 TRAV22A0A0B4J277 110 aa10.8□□□□□ -0.68
DHFR-201ENST00000439211 DEFB105AQ8NG35 78 aa10.8□□□□□ -0.68
DHFR-201ENST00000439211 KLK12Q9UKR0 248 aa10.8□□□□□ -0.68
DHFR-201ENST00000439211 LY6G6DO95868 133 aa10.79□□□□□ -0.68
DHFR-201ENST00000439211 A6NED7 52 aa10.79□□□□□ -0.68
DHFR-201ENST00000439211 CD164L2Q6UWJ8 174 aa10.79□□□□□ -0.68
DHFR-201ENST00000439211 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.79□□□□□ -0.68
DHFR-201ENST00000439211 LYRM9A8MSI8 78 aa10.78□□□□□ -0.68
DHFR-201ENST00000439211 ERC2-IT1O76042 136 aa10.78□□□□□ -0.68
DHFR-201ENST00000439211 SPAG11BQ08648 103 aa10.78□□□□□ -0.68
DHFR-201ENST00000439211 UBE2AP49459 152 aa10.77□□□□□ -0.69
DHFR-201ENST00000439211 LINC00167Q96N53 147 aa10.77□□□□□ -0.69
DHFR-201ENST00000439211 hDV103S1A0JD37 113 aa10.76□□□□□ -0.69
DHFR-201ENST00000439211 H3BQ85 93 aa10.76□□□□□ -0.69
DHFR-201ENST00000439211 RBM12B-AS1Q9P1G2 102 aa10.76□□□□□ -0.69
DHFR-201ENST00000439211 Q6ZRP5 223 aa10.76□□□□□ -0.69
DHFR-201ENST00000439211 KRTAP1-3Q8IUG1 177 aa10.76□□□□□ -0.69
DHFR-201ENST00000439211 Q8IZM0 81 aa10.76□□□□□ -0.69
DHFR-201ENST00000439211 PRR15LQ9BU68 103 aa10.76□□□□□ -0.69
DHFR-201ENST00000439211 COX7BP24311 80 aa10.75□□□□□ -0.69
DHFR-201ENST00000439211 SMIM29Q86T20 159 aa10.75□□□□□ -0.69
DHFR-201ENST00000439211 CSNK1G2-AS1Q8NCQ2 148 aa10.75□□□□□ -0.69
DHFR-201ENST00000439211 Q6ZTC4 211 aa10.74□□□□□ -0.69
DHFR-201ENST00000439211 XAGE1AQ9HD64 81 aa10.74□□□□□ -0.69
DHFR-201ENST00000439211 APOC4P55056 127 aa10.74□□□□□ -0.69
DHFR-201ENST00000439211 C19orf73Q9NVV2 129 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms