RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 Q8IZM0 81 aa7.2□□□□□ -1.26
HMGCL-204ENST00000436439 ERG28Q9UKR5 140 aa7.2□□□□□ -1.26
HMGCL-204ENST00000436439 TRBV20-1A0A075B6N2 111 aa7.2□□□□□ -1.26
HMGCL-204ENST00000436439 LOC107984156A0A0G2JMH3 177 aa7.2□□□□□ -1.26
HMGCL-204ENST00000436439 INAFM2P0DMQ5 153 aa7.2□□□□□ -1.26
HMGCL-204ENST00000436439 MALP21145 153 aa7.2□□□□□ -1.26
HMGCL-204ENST00000436439 ARL17AQ8IVW1 177 aa7.2□□□□□ -1.26
HMGCL-204ENST00000436439 Q9HAA7 133 aa7.2□□□□□ -1.26
HMGCL-204ENST00000436439 LRCOL1A6NCL2 159 aa7.19□□□□□ -1.26
HMGCL-204ENST00000436439 EIF4EBP3O60516 100 aaPredicted RBP7.19□□□□□ -1.26
HMGCL-204ENST00000436439 SMR3BP02814 79 aaPredicted RBP7.19□□□□□ -1.26
HMGCL-204ENST00000436439 KIAA0087Q14695 138 aa7.19□□□□□ -1.26
HMGCL-204ENST00000436439 OCIAD2Q56VL3 154 aa7.19□□□□□ -1.26
HMGCL-204ENST00000436439 MEIG1Q5JSS6 88 aa7.19□□□□□ -1.26
HMGCL-204ENST00000436439 LINC00308Q8TCZ7 52 aa7.19□□□□□ -1.26
HMGCL-204ENST00000436439 KRTAP3-3Q9BYR6 98 aa7.19□□□□□ -1.26
HMGCL-204ENST00000436439 KRTAP3-2Q9BYR7 98 aa7.19□□□□□ -1.26
HMGCL-204ENST00000436439 CXCL5P42830 114 aa7.18□□□□□ -1.26
HMGCL-204ENST00000436439 TRBV30A0A0K0K1B3 111 aa7.17□□□□□ -1.26
HMGCL-204ENST00000436439 F8WDY8 70 aa7.17□□□□□ -1.26
HMGCL-204ENST00000436439 H3BMG7 143 aa7.17□□□□□ -1.26
HMGCL-204ENST00000436439 K7ERU9 68 aa7.17□□□□□ -1.26
HMGCL-204ENST00000436439 PSMB2P49721 201 aa7.17□□□□□ -1.26
HMGCL-204ENST00000436439 CFAP161Q6P656 301 aa7.17□□□□□ -1.26
HMGCL-204ENST00000436439 DNAH8Q96JB1 4490 aa7.16□□□□□ -1.26
HMGCL-204ENST00000436439 SCGB1C2P0DMR2 95 aa7.16□□□□□ -1.26
HMGCL-204ENST00000436439 Q1RN00 199 aa7.16□□□□□ -1.26
HMGCL-204ENST00000436439 C6orf226Q5I0X4 101 aa7.16□□□□□ -1.26
HMGCL-204ENST00000436439 C15orf56Q8N910 161 aa7.16□□□□□ -1.26
HMGCL-204ENST00000436439 TOMM7Q9P0U1 55 aa7.16□□□□□ -1.26
HMGCL-204ENST00000436439 PRO0461Q9UI25 63 aa7.16□□□□□ -1.26
HMGCL-204ENST00000436439 GVQW2A0A096LPI5 108 aaPredicted RBP7.15□□□□□ -1.26
HMGCL-204ENST00000436439 IGLV5-52A0A0A0MRZ9 124 aa7.15□□□□□ -1.26
HMGCL-204ENST00000436439 PSCAO43653 123 aa7.15□□□□□ -1.26
HMGCL-204ENST00000436439 SPAG11BQ08648 103 aa7.15□□□□□ -1.26
HMGCL-204ENST00000436439 DAND5Q8N907 189 aa7.15□□□□□ -1.26
HMGCL-204ENST00000436439 H7C2G1 150 aa7.14□□□□□ -1.27
HMGCL-204ENST00000436439 TCL1BO95988 128 aa7.14□□□□□ -1.27
HMGCL-204ENST00000436439 NPC2P61916 151 aa7.14□□□□□ -1.27
HMGCL-204ENST00000436439 Q8N814 137 aa7.14□□□□□ -1.27
HMGCL-204ENST00000436439 NTN5Q8WTR8 489 aaPredicted RBP7.14□□□□□ -1.27
HMGCL-204ENST00000436439 C2orf48Q96LS8 159 aa7.14□□□□□ -1.27
HMGCL-204ENST00000436439 FAM30AQ9NZY2 134 aa7.14□□□□□ -1.27
HMGCL-204ENST00000436439 MYCBP2O75592 4640 aa7.14□□□□□ -1.27
HMGCL-204ENST00000436439 COX6CP09669 75 aa7.13□□□□□ -1.27
HMGCL-204ENST00000436439 RPL13AP40429 203 aaKnown RBP7.13□□□□□ -1.27
HMGCL-204ENST00000436439 CKS1BP61024 79 aa7.13□□□□□ -1.27
HMGCL-204ENST00000436439 WFDC2Q14508 124 aa7.13□□□□□ -1.27
HMGCL-204ENST00000436439 SOSTDC1Q6X4U4 206 aa7.13□□□□□ -1.27
HMGCL-204ENST00000436439 A0A0U1RRA0 63 aa7.12□□□□□ -1.27
HMGCL-204ENST00000436439 ZNF561-AS1K7EIQ3 104 aa7.12□□□□□ -1.27
HMGCL-204ENST00000436439 USP17L23D6RBM5 183 aa7.11□□□□□ -1.27
HMGCL-204ENST00000436439 M0QXV9 152 aa7.11□□□□□ -1.27
HMGCL-204ENST00000436439 TRIAP1O43715 76 aa7.11□□□□□ -1.27
HMGCL-204ENST00000436439 LINC00158P58513 81 aa7.11□□□□□ -1.27
HMGCL-204ENST00000436439 COX17Q14061 63 aa7.11□□□□□ -1.27
HMGCL-204ENST00000436439 ATXN8Q156A1 80 aa7.11□□□□□ -1.27
HMGCL-204ENST00000436439 MIR7-3HGQ8N6C7 128 aa7.11□□□□□ -1.27
HMGCL-204ENST00000436439 FAM229AH3BQW9 127 aa7.1□□□□□ -1.27
HMGCL-204ENST00000436439 HIGD2BQ4VC39 106 aa7.1□□□□□ -1.27
HMGCL-204ENST00000436439 C14orf177Q52M58 125 aa7.1□□□□□ -1.27
HMGCL-204ENST00000436439 C2orf82Q6UX34 121 aa7.1□□□□□ -1.27
HMGCL-204ENST00000436439 SRRM2Q9UQ35 2752 aaKnown RBP7.1□□□□□ -1.27
HMGCL-204ENST00000436439 TRAV13-2A0A0B4J235 113 aa7.09□□□□□ -1.27
HMGCL-204ENST00000436439 J3QR89 54 aa7.09□□□□□ -1.27
HMGCL-204ENST00000436439 CBY1Q9Y3M2 126 aa7.09□□□□□ -1.27
HMGCL-204ENST00000436439 FLG2Q5D862 2391 aaPredicted RBP7.09□□□□□ -1.27
HMGCL-204ENST00000436439 LECT2O14960 151 aa7.08□□□□□ -1.28
HMGCL-204ENST00000436439 SMCPP49901 116 aaPredicted RBP7.08□□□□□ -1.28
HMGCL-204ENST00000436439 RNF151Q2KHN1 245 aa7.08□□□□□ -1.28
HMGCL-204ENST00000436439 UNQ6190/PRO20217Q6UXQ8 127 aa7.08□□□□□ -1.28
HMGCL-204ENST00000436439 LINC00526Q96FQ7 95 aa7.08□□□□□ -1.28
HMGCL-204ENST00000436439 LINC01600Q96MT4 127 aa7.08□□□□□ -1.28
HMGCL-204ENST00000436439 CAMK2N2Q96S95 79 aa7.08□□□□□ -1.28
HMGCL-204ENST00000436439 SND1-IT1Q9HBX3 110 aa7.08□□□□□ -1.28
HMGCL-204ENST00000436439 ETDBQ3ZM63 59 aa7.08□□□□□ -1.28
HMGCL-204ENST00000436439 LINC01620Q4KN68 170 aa7.08□□□□□ -1.28
HMGCL-204ENST00000436439 C10orf25Q5T742 122 aa7.08□□□□□ -1.28
HMGCL-204ENST00000436439 Q6ZSA8 131 aa7.08□□□□□ -1.28
HMGCL-204ENST00000436439 MTURNQ8N3F0 131 aa7.08□□□□□ -1.28
HMGCL-204ENST00000436439 C6orf48Q9UBA6 75 aa7.08□□□□□ -1.28
HMGCL-204ENST00000436439 DMBT1Q9UGM3 2413 aaPredicted RBP7.07□□□□□ -1.28
HMGCL-204ENST00000436439 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.07□□□□□ -1.28
HMGCL-204ENST00000436439 C9JAW5 83 aa7.07□□□□□ -1.28
HMGCL-204ENST00000436439 PFN2P35080 140 aa7.07□□□□□ -1.28
HMGCL-204ENST00000436439 SYCNQ0VAF6 134 aa7.07□□□□□ -1.28
HMGCL-204ENST00000436439 Q6ZRU5 148 aa7.07□□□□□ -1.28
HMGCL-204ENST00000436439 LST1O00453 97 aa7.06□□□□□ -1.28
HMGCL-204ENST00000436439 SLC25A20O43772 301 aa7.06□□□□□ -1.28
HMGCL-204ENST00000436439 SLPIP03973 132 aa7.06□□□□□ -1.28
HMGCL-204ENST00000436439 CNBPP62633 177 aaKnown RBP7.06□□□□□ -1.28
HMGCL-204ENST00000436439 TEN1Q86WV5 123 aa7.06□□□□□ -1.28
HMGCL-204ENST00000436439 VPS25Q9BRG1 176 aa7.06□□□□□ -1.28
HMGCL-204ENST00000436439 TRBV10-2A0A0K0K1G8 114 aa7.05□□□□□ -1.28
HMGCL-204ENST00000436439 TLX1NBP0CAT3 122 aa7.05□□□□□ -1.28
HMGCL-204ENST00000436439 CARD19Q96LW7 228 aa7.05□□□□□ -1.28
HMGCL-204ENST00000436439 IGKV2-28A0A075B6P5 120 aa7.04□□□□□ -1.28
HMGCL-204ENST00000436439 H3BT86 120 aa7.04□□□□□ -1.28
HMGCL-204ENST00000436439 IGKV2D-28P01615 120 aa7.04□□□□□ -1.28
HMGCL-204ENST00000436439 RPL28P46779 137 aaKnown RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 143.6 ms