RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 SEC11CQ9BY50 192 aa5.53□□□□□ -1.52
CDC42-IT1-201ENST00000431803 A0A096LNJ9 63 aa5.52□□□□□ -1.53
CDC42-IT1-201ENST00000431803 H3BRM9 83 aa5.52□□□□□ -1.53
CDC42-IT1-201ENST00000431803 IGLC3P0DOY3 106 aa5.52□□□□□ -1.53
CDC42-IT1-201ENST00000431803 RAB5BP61020 215 aa5.52□□□□□ -1.53
CDC42-IT1-201ENST00000431803 COX19Q49B96 90 aa5.52□□□□□ -1.53
CDC42-IT1-201ENST00000431803 FA2HQ7L5A8 372 aa5.52□□□□□ -1.53
CDC42-IT1-201ENST00000431803 ATP5LO75964 103 aa5.51□□□□□ -1.53
CDC42-IT1-201ENST00000431803 TSPAN13O95857 204 aa5.51□□□□□ -1.53
CDC42-IT1-201ENST00000431803 IFITM2Q01629 132 aa5.51□□□□□ -1.53
CDC42-IT1-201ENST00000431803 KRTAP13-2Q52LG2 175 aa5.51□□□□□ -1.53
CDC42-IT1-201ENST00000431803 NKAPP1Q8N9T2 125 aa5.51□□□□□ -1.53
CDC42-IT1-201ENST00000431803 TYMSOSQ8TAI1 123 aa5.51□□□□□ -1.53
CDC42-IT1-201ENST00000431803 SMCO4Q9NRQ5 59 aa5.51□□□□□ -1.53
CDC42-IT1-201ENST00000431803 ANAPC11Q9NYG5 84 aa5.51□□□□□ -1.53
CDC42-IT1-201ENST00000431803 SCO1O75880 301 aa5.5□□□□□ -1.53
CDC42-IT1-201ENST00000431803 ZNF22P17026 224 aaPredicted RBP5.5□□□□□ -1.53
CDC42-IT1-201ENST00000431803 FABP9Q0Z7S8 132 aa5.5□□□□□ -1.53
CDC42-IT1-201ENST00000431803 FAM229BQ4G0N7 80 aa5.5□□□□□ -1.53
CDC42-IT1-201ENST00000431803 C10orf91Q5T1B1 145 aa5.5□□□□□ -1.53
CDC42-IT1-201ENST00000431803 IGKV2-28A0A075B6P5 120 aa5.49□□□□□ -1.53
CDC42-IT1-201ENST00000431803 IGKV2D-28P01615 120 aa5.49□□□□□ -1.53
CDC42-IT1-201ENST00000431803 VPREB1P12018 145 aa5.49□□□□□ -1.53
CDC42-IT1-201ENST00000431803 PFN2P35080 140 aa5.49□□□□□ -1.53
CDC42-IT1-201ENST00000431803 UBE2AP49459 152 aa5.49□□□□□ -1.53
CDC42-IT1-201ENST00000431803 RHEBQ15382 184 aa5.49□□□□□ -1.53
CDC42-IT1-201ENST00000431803 URB1-AS1Q96HZ7 61 aa5.49□□□□□ -1.53
CDC42-IT1-201ENST00000431803 SND1-IT1Q9HBX3 110 aa5.49□□□□□ -1.53
CDC42-IT1-201ENST00000431803 COX17Q14061 63 aa5.48□□□□□ -1.53
CDC42-IT1-201ENST00000431803 Q8NDZ9 215 aa5.48□□□□□ -1.53
CDC42-IT1-201ENST00000431803 C18orf32Q8TCD1 76 aa5.48□□□□□ -1.53
CDC42-IT1-201ENST00000431803 TMEM126AQ9H061 195 aa5.48□□□□□ -1.53
CDC42-IT1-201ENST00000431803 ERG28Q9UKR5 140 aa5.48□□□□□ -1.53
CDC42-IT1-201ENST00000431803 FAT4Q6V0I7 4981 aa5.48□□□□□ -1.53
CDC42-IT1-201ENST00000431803 TMEM238C9JI98 176 aa5.47□□□□□ -1.53
CDC42-IT1-201ENST00000431803 HBDP02042 147 aa5.47□□□□□ -1.53
CDC42-IT1-201ENST00000431803 LINC00614P0C842 121 aa5.47□□□□□ -1.53
CDC42-IT1-201ENST00000431803 NDUFA6P56556 154 aa5.47□□□□□ -1.53
CDC42-IT1-201ENST00000431803 PRLHP81277 87 aa5.47□□□□□ -1.53
CDC42-IT1-201ENST00000431803 COMMD7Q86VX2 200 aa5.47□□□□□ -1.53
CDC42-IT1-201ENST00000431803 C11orf86A6NJI1 115 aa5.46□□□□□ -1.54
CDC42-IT1-201ENST00000431803 M0R378 163 aa5.46□□□□□ -1.54
CDC42-IT1-201ENST00000431803 RPL24P83731 157 aaKnown RBP5.46□□□□□ -1.54
CDC42-IT1-201ENST00000431803 PMCHL1Q16048 86 aa5.46□□□□□ -1.54
CDC42-IT1-201ENST00000431803 SFTA2Q6UW10 78 aa5.46□□□□□ -1.54
CDC42-IT1-201ENST00000431803 LINC00304Q8N9R0 145 aa5.46□□□□□ -1.54
CDC42-IT1-201ENST00000431803 ZNF625Q96I27 306 aaPredicted RBP5.46□□□□□ -1.54
CDC42-IT1-201ENST00000431803 RPS10P5Q9NQ39 176 aa5.46□□□□□ -1.54
CDC42-IT1-201ENST00000431803 FAM19A1Q7Z5A9 133 aa5.45□□□□□ -1.54
CDC42-IT1-201ENST00000431803 TRAPPC1Q9Y5R8 145 aa5.45□□□□□ -1.54
CDC42-IT1-201ENST00000431803 MUC17Q685J3 4493 aa5.45□□□□□ -1.54
CDC42-IT1-201ENST00000431803 IGKV2D-26A0A0A0MRZ7 120 aa5.44□□□□□ -1.54
CDC42-IT1-201ENST00000431803 A0A0U1RQV1 116 aa5.44□□□□□ -1.54
CDC42-IT1-201ENST00000431803 CTAG1AP78358 180 aa5.44□□□□□ -1.54
CDC42-IT1-201ENST00000431803 BAGE3Q86Y29 109 aa5.44□□□□□ -1.54
CDC42-IT1-201ENST00000431803 PLEKHB2Q96CS7 222 aa5.44□□□□□ -1.54
CDC42-IT1-201ENST00000431803 RETNLBQ9BQ08 111 aa5.44□□□□□ -1.54
CDC42-IT1-201ENST00000431803 KRTAP9-8Q9BYQ0 159 aa5.44□□□□□ -1.54
CDC42-IT1-201ENST00000431803 TPRXLQ17RH7 258 aa5.43□□□□□ -1.54
CDC42-IT1-201ENST00000431803 TMEM170BQ5T4T1 132 aa5.43□□□□□ -1.54
CDC42-IT1-201ENST00000431803 PCP4P48539 62 aa5.42□□□□□ -1.54
CDC42-IT1-201ENST00000431803 CBLN2Q8IUK8 224 aa5.42□□□□□ -1.54
CDC42-IT1-201ENST00000431803 TMEM223A0PJW6 202 aa5.41□□□□□ -1.54
CDC42-IT1-201ENST00000431803 C3orf22Q8N5N4 141 aa5.41□□□□□ -1.54
CDC42-IT1-201ENST00000431803 CHTOPQ9Y3Y2 248 aaKnown RBP5.41□□□□□ -1.54
CDC42-IT1-201ENST00000431803 TRAV12-1A0A0B4J245 112 aa5.4□□□□□ -1.54
CDC42-IT1-201ENST00000431803 LINC00158P58513 81 aa5.4□□□□□ -1.54
CDC42-IT1-201ENST00000431803 SPRR4Q96PI1 79 aa5.4□□□□□ -1.54
CDC42-IT1-201ENST00000431803 HIGD2AQ9BW72 106 aa5.4□□□□□ -1.54
CDC42-IT1-201ENST00000431803 IGLV7-46A0A075B6I9 117 aa5.39□□□□□ -1.55
CDC42-IT1-201ENST00000431803 APOC3P02656 99 aa5.39□□□□□ -1.55
CDC42-IT1-201ENST00000431803 CHCHD1Q96BP2 118 aaKnown RBP5.39□□□□□ -1.55
CDC42-IT1-201ENST00000431803 YPEL4Q96NS1 127 aa5.39□□□□□ -1.55
CDC42-IT1-201ENST00000431803 A0A0U1RRA0 63 aa5.38□□□□□ -1.55
CDC42-IT1-201ENST00000431803 PRYO14603 147 aa5.38□□□□□ -1.55
CDC42-IT1-201ENST00000431803 SNAPINO95295 136 aa5.38□□□□□ -1.55
CDC42-IT1-201ENST00000431803 SPRR1AP35321 89 aa5.38□□□□□ -1.55
CDC42-IT1-201ENST00000431803 SVBPQ8N300 66 aa5.38□□□□□ -1.55
CDC42-IT1-201ENST00000431803 IFI27L1Q96BM0 104 aa5.38□□□□□ -1.55
CDC42-IT1-201ENST00000431803 KRTAP4-16G5E9R7 235 aaPredicted RBP5.37□□□□□ -1.55
CDC42-IT1-201ENST00000431803 SMIM13P0DJ93 91 aa5.37□□□□□ -1.55
CDC42-IT1-201ENST00000431803 SPAG11AQ6PDA7 123 aa5.37□□□□□ -1.55
CDC42-IT1-201ENST00000431803 BOD1L2Q8IYS8 172 aa5.37□□□□□ -1.55
CDC42-IT1-201ENST00000431803 LINC00337Q8N6G1 96 aa5.37□□□□□ -1.55
CDC42-IT1-201ENST00000431803 KCNQ1DNQ9H478 68 aa5.37□□□□□ -1.55
CDC42-IT1-201ENST00000431803 ZNF706Q9Y5V0 76 aaPredicted RBP5.37□□□□□ -1.55
CDC42-IT1-201ENST00000431803 HERV-K104P63124 156 aa5.36□□□□□ -1.55
CDC42-IT1-201ENST00000431803 NDUFA5Q16718 116 aa5.36□□□□□ -1.55
CDC42-IT1-201ENST00000431803 MIR7-3HGQ8N6C7 128 aa5.36□□□□□ -1.55
CDC42-IT1-201ENST00000431803 PPDPFQ9H3Y8 114 aa5.36□□□□□ -1.55
CDC42-IT1-201ENST00000431803 NCR3O14931 201 aa5.35□□□□□ -1.55
CDC42-IT1-201ENST00000431803 MEIG1Q5JSS6 88 aa5.35□□□□□ -1.55
CDC42-IT1-201ENST00000431803 FP248Q71RG6 208 aaPredicted RBP5.35□□□□□ -1.55
CDC42-IT1-201ENST00000431803 NDUFA12Q9UI09 145 aa5.35□□□□□ -1.55
CDC42-IT1-201ENST00000431803 TRBV10-3A0A0K0K1G6 114 aa5.34□□□□□ -1.55
CDC42-IT1-201ENST00000431803 LINC00587B1AMM8 73 aa5.34□□□□□ -1.55
CDC42-IT1-201ENST00000431803 ATP6V1G1O75348 118 aa5.34□□□□□ -1.55
CDC42-IT1-201ENST00000431803 LINC00483Q53H64 154 aa5.34□□□□□ -1.55
CDC42-IT1-201ENST00000431803 Q8NBF4 154 aa5.34□□□□□ -1.55
CDC42-IT1-201ENST00000431803 SMCR5Q8TEV8 140 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms